Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01877:01878
Extra
PDB:
ATOM 1 O3' U A1876 93.569 74.748 33.788 1.00 68.34 O
ATOM 2 P A A1877 93.793 73.974 32.396 1.00 68.96 P
ATOM 3 OP1 A A1877 92.451 73.741 31.804 1.00 69.53 O
ATOM 4 OP2 A A1877 94.695 72.823 32.643 1.00 70.87 O
ATOM 5 O5' A A1877 94.566 75.019 31.476 1.00 70.83 O
ATOM 6 C5' A A1877 94.726 74.779 30.066 1.00 73.36 C
ATOM 7 C4' A A1877 96.081 75.260 29.596 1.00 74.38 C
ATOM 8 O4' A A1877 96.248 74.902 28.196 1.00 76.63 O
ATOM 9 C3' A A1877 96.305 76.766 29.670 1.00 74.17 C
ATOM 10 O3' A A1877 97.694 77.017 29.887 1.00 71.70 O
ATOM 11 C2' A A1877 95.889 77.221 28.275 1.00 76.20 C
ATOM 12 O2' A A1877 96.456 78.465 27.912 1.00 75.55 O
ATOM 13 C1' A A1877 96.426 76.072 27.419 1.00 79.29 C
ATOM 14 N9 A A1877 95.759 75.876 26.125 1.00 84.87 N
ATOM 15 C8 A A1877 94.817 74.926 25.793 1.00 85.94 C
ATOM 16 N7 A A1877 94.408 74.996 24.547 1.00 87.23 N
ATOM 17 C5 A A1877 95.124 76.064 24.020 1.00 89.26 C
ATOM 18 C6 A A1877 95.141 76.658 22.736 1.00 90.99 C
ATOM 19 N6 A A1877 94.385 76.243 21.712 1.00 90.97 N
ATOM 20 N1 A A1877 95.972 77.709 22.541 1.00 91.30 N
ATOM 21 C2 A A1877 96.726 78.130 23.566 1.00 90.41 C
ATOM 22 N3 A A1877 96.796 77.660 24.813 1.00 89.83 N
ATOM 23 C4 A A1877 95.961 76.615 24.979 1.00 88.02 C
ATOM 24 P C A1878 98.195 77.577 31.307 1.00 69.45 P
ATOM 25 OP1 C A1878 99.681 77.575 31.320 1.00 69.05 O
ATOM 26 OP2 C A1878 97.457 76.841 32.363 1.00 70.04 O
ATOM 27 O5' C A1878 97.713 79.094 31.309 1.00 68.33 O
TER
ATOM 1 O3' A B1877 97.694 77.017 29.887 1.00 71.70 O
ATOM 2 P C B1878 98.195 77.577 31.307 1.00 69.45 P
ATOM 3 OP1 C B1878 99.681 77.575 31.320 1.00 69.05 O
ATOM 4 OP2 C B1878 97.457 76.841 32.363 1.00 70.04 O
ATOM 5 O5' C B1878 97.713 79.094 31.309 1.00 68.33 O
ATOM 6 C5' C B1878 98.408 80.092 30.541 1.00 66.51 C
ATOM 7 C4' C B1878 97.680 81.411 30.624 1.00 65.30 C
ATOM 8 O4' C B1878 96.352 81.254 30.069 1.00 66.30 O
ATOM 9 C3' C B1878 97.444 81.940 32.027 1.00 63.93 C
ATOM 10 O3' C B1878 98.569 82.675 32.477 1.00 62.05 O
ATOM 11 C2' C B1878 96.229 82.836 31.842 1.00 64.77 C
ATOM 12 O2' C B1878 96.557 84.100 31.308 1.00 64.25 O
ATOM 13 C1' C B1878 95.435 82.058 30.793 1.00 66.23 C
ATOM 14 N1 C B1878 94.357 81.196 31.326 1.00 68.30 N
ATOM 15 C2 C B1878 93.195 81.799 31.833 1.00 68.35 C
ATOM 16 O2 C B1878 93.118 83.043 31.856 1.00 68.79 O
ATOM 17 N3 C B1878 92.189 81.014 32.284 1.00 68.60 N
ATOM 18 C4 C B1878 92.308 79.684 32.246 1.00 68.57 C
ATOM 19 N4 C B1878 91.280 78.951 32.685 1.00 68.59 N
ATOM 20 C5 C B1878 93.483 79.047 31.754 1.00 68.34 C
ATOM 21 C6 C B1878 94.473 79.831 31.313 1.00 68.29 C
ATOM 22 P A B1879 98.942 82.691 34.035 1.00 62.76 P
ATOM 23 OP1 A B1879 99.939 83.781 34.250 1.00 63.16 O
ATOM 24 OP2 A B1879 99.293 81.298 34.400 1.00 63.30 O
ATOM 25 O5' A B1879 97.584 83.097 34.768 1.00 61.40 O
TER
ATOM 2 P A A1877 93.793 73.974 32.396 1.00 68.96 P
ATOM 3 OP1 A A1877 92.451 73.741 31.804 1.00 69.53 O
ATOM 4 OP2 A A1877 94.695 72.823 32.643 1.00 70.87 O
ATOM 5 O5' A A1877 94.566 75.019 31.476 1.00 70.83 O
ATOM 6 C5' A A1877 94.726 74.779 30.066 1.00 73.36 C
ATOM 7 C4' A A1877 96.081 75.260 29.596 1.00 74.38 C
ATOM 8 O4' A A1877 96.248 74.902 28.196 1.00 76.63 O
ATOM 9 C3' A A1877 96.305 76.766 29.670 1.00 74.17 C
ATOM 10 O3' A A1877 97.694 77.017 29.887 1.00 71.70 O
ATOM 11 C2' A A1877 95.889 77.221 28.275 1.00 76.20 C
ATOM 12 O2' A A1877 96.456 78.465 27.912 1.00 75.55 O
ATOM 13 C1' A A1877 96.426 76.072 27.419 1.00 79.29 C
ATOM 14 N9 A A1877 95.759 75.876 26.125 1.00 84.87 N
ATOM 15 C8 A A1877 94.817 74.926 25.793 1.00 85.94 C
ATOM 16 N7 A A1877 94.408 74.996 24.547 1.00 87.23 N
ATOM 17 C5 A A1877 95.124 76.064 24.020 1.00 89.26 C
ATOM 18 C6 A A1877 95.141 76.658 22.736 1.00 90.99 C
ATOM 19 N6 A A1877 94.385 76.243 21.712 1.00 90.97 N
ATOM 20 N1 A A1877 95.972 77.709 22.541 1.00 91.30 N
ATOM 21 C2 A A1877 96.726 78.130 23.566 1.00 90.41 C
ATOM 22 N3 A A1877 96.796 77.660 24.813 1.00 89.83 N
ATOM 23 C4 A A1877 95.961 76.615 24.979 1.00 88.02 C
ATOM 24 P C A1878 98.195 77.577 31.307 1.00 69.45 P
ATOM 25 OP1 C A1878 99.681 77.575 31.320 1.00 69.05 O
ATOM 26 OP2 C A1878 97.457 76.841 32.363 1.00 70.04 O
ATOM 27 O5' C A1878 97.713 79.094 31.309 1.00 68.33 O
TER
ATOM 1 O3' A B1877 97.694 77.017 29.887 1.00 71.70 O
ATOM 2 P C B1878 98.195 77.577 31.307 1.00 69.45 P
ATOM 3 OP1 C B1878 99.681 77.575 31.320 1.00 69.05 O
ATOM 4 OP2 C B1878 97.457 76.841 32.363 1.00 70.04 O
ATOM 5 O5' C B1878 97.713 79.094 31.309 1.00 68.33 O
ATOM 6 C5' C B1878 98.408 80.092 30.541 1.00 66.51 C
ATOM 7 C4' C B1878 97.680 81.411 30.624 1.00 65.30 C
ATOM 8 O4' C B1878 96.352 81.254 30.069 1.00 66.30 O
ATOM 9 C3' C B1878 97.444 81.940 32.027 1.00 63.93 C
ATOM 10 O3' C B1878 98.569 82.675 32.477 1.00 62.05 O
ATOM 11 C2' C B1878 96.229 82.836 31.842 1.00 64.77 C
ATOM 12 O2' C B1878 96.557 84.100 31.308 1.00 64.25 O
ATOM 13 C1' C B1878 95.435 82.058 30.793 1.00 66.23 C
ATOM 14 N1 C B1878 94.357 81.196 31.326 1.00 68.30 N
ATOM 15 C2 C B1878 93.195 81.799 31.833 1.00 68.35 C
ATOM 16 O2 C B1878 93.118 83.043 31.856 1.00 68.79 O
ATOM 17 N3 C B1878 92.189 81.014 32.284 1.00 68.60 N
ATOM 18 C4 C B1878 92.308 79.684 32.246 1.00 68.57 C
ATOM 19 N4 C B1878 91.280 78.951 32.685 1.00 68.59 N
ATOM 20 C5 C B1878 93.483 79.047 31.754 1.00 68.34 C
ATOM 21 C6 C B1878 94.473 79.831 31.313 1.00 68.29 C
ATOM 22 P A B1879 98.942 82.691 34.035 1.00 62.76 P
ATOM 23 OP1 A B1879 99.939 83.781 34.250 1.00 63.16 O
ATOM 24 OP2 A B1879 99.293 81.298 34.400 1.00 63.30 O
ATOM 25 O5' A B1879 97.584 83.097 34.768 1.00 61.40 O
TER
Atoms:
OP1: (92.451,73.741,31.804)
OP2: (94.695,72.823,32.643)
C3': (96.305,76.766,29.670)
C1': (96.426,76.072,27.419)
C5': (94.726,74.779,30.066)
O4': (96.248,74.902,28.196)
C8: (94.817,74.926,25.793)
O2': (96.456,78.465,27.912)
C6: (95.141,76.658,22.736)
C5: (95.124,76.064,24.020)
C4: (95.961,76.615,24.979)
P: (93.793,73.974,32.396)
C4': (96.081,75.260,29.596)
C2': (95.889,77.221,28.275)
C2: (96.726,78.130,23.566)
N1: (95.972,77.709,22.541)
N3: (96.796,77.660,24.813)
N6: (94.385,76.243,21.712)
N7: (94.408,74.996,24.547)
N9: (95.759,75.876,26.125)
O5': (94.566,75.019,31.476)
O3': (97.694,77.017,29.887)
OP2: (94.695,72.823,32.643)
C3': (96.305,76.766,29.670)
C1': (96.426,76.072,27.419)
C5': (94.726,74.779,30.066)
O4': (96.248,74.902,28.196)
C8: (94.817,74.926,25.793)
O2': (96.456,78.465,27.912)
C6: (95.141,76.658,22.736)
C5: (95.124,76.064,24.020)
C4: (95.961,76.615,24.979)
P: (93.793,73.974,32.396)
C4': (96.081,75.260,29.596)
C2': (95.889,77.221,28.275)
C2: (96.726,78.130,23.566)
N1: (95.972,77.709,22.541)
N3: (96.796,77.660,24.813)
N6: (94.385,76.243,21.712)
N7: (94.408,74.996,24.547)
N9: (95.759,75.876,26.125)
O5': (94.566,75.019,31.476)
O3': (97.694,77.017,29.887)
C2: (93.195,81.799,31.833)
OP1: (99.681,77.575,31.320)
OP2: (97.457,76.841,32.363)
C4: (92.308,79.684,32.246)
O5': (97.713,79.094,31.309)
C3': (97.444,81.940,32.027)
C1': (95.435,82.058,30.793)
O4': (96.352,81.254,30.069)
C5': (98.408,80.092,30.541)
P: (98.195,77.577,31.307)
O2: (93.118,83.043,31.856)
C4': (97.680,81.411,30.624)
C2': (96.229,82.836,31.842)
O2': (96.557,84.100,31.308)
N1: (94.357,81.196,31.326)
N3: (92.189,81.014,32.284)
N4: (91.280,78.951,32.685)
C6: (94.473,79.831,31.313)
C5: (93.483,79.047,31.754)
O3': (98.569,82.675,32.477)
OP1: (99.681,77.575,31.320)
OP2: (97.457,76.841,32.363)
C4: (92.308,79.684,32.246)
O5': (97.713,79.094,31.309)
C3': (97.444,81.940,32.027)
C1': (95.435,82.058,30.793)
O4': (96.352,81.254,30.069)
C5': (98.408,80.092,30.541)
P: (98.195,77.577,31.307)
O2: (93.118,83.043,31.856)
C4': (97.680,81.411,30.624)
C2': (96.229,82.836,31.842)
O2': (96.557,84.100,31.308)
N1: (94.357,81.196,31.326)
N3: (92.189,81.014,32.284)
N4: (91.280,78.951,32.685)
C6: (94.473,79.831,31.313)
C5: (93.483,79.047,31.754)
O3': (98.569,82.675,32.477)
Image (generated by PyMOL):