ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2R8S:R83:R84

Extra

PDB:
ATOM 1 O3' A A 82 67.869 -37.791 23.956 1.00 38.68 O
ATOM 2 P U A 83 69.422 -38.022 23.656 1.00 36.33 P
ATOM 3 OP1 U A 83 69.764 -37.263 22.428 1.00 38.69 O
ATOM 4 OP2 U A 83 69.658 -39.474 23.769 1.00 41.66 O
ATOM 5 O5' U A 83 70.197 -37.326 24.867 1.00 37.21 O
ATOM 6 C5' U A 83 70.139 -37.844 26.182 1.00 38.54 C
ATOM 7 C4' U A 83 71.484 -37.679 26.845 1.00 39.54 C
ATOM 8 O4' U A 83 72.437 -38.495 26.128 1.00 40.89 O
ATOM 9 C3' U A 83 72.019 -36.253 26.807 1.00 39.20 C
ATOM 10 O3' U A 83 72.735 -35.932 27.970 1.00 34.04 O
ATOM 11 C2' U A 83 72.972 -36.286 25.621 1.00 41.36 C
ATOM 12 O2' U A 83 74.001 -35.330 25.747 1.00 43.25 O
ATOM 13 C1' U A 83 73.531 -37.695 25.752 1.00 47.14 C
ATOM 14 N1 U A 83 74.092 -38.357 24.526 1.00 52.26 N
ATOM 15 C2 U A 83 75.326 -38.980 24.604 1.00 55.39 C
ATOM 16 O2 U A 83 76.013 -38.999 25.613 1.00 56.91 O
ATOM 17 N3 U A 83 75.740 -39.583 23.441 1.00 55.79 N
ATOM 18 C4 U A 83 75.061 -39.630 22.236 1.00 54.06 C
ATOM 19 O4 U A 83 75.572 -40.211 21.279 1.00 55.77 O
ATOM 20 C5 U A 83 73.775 -38.973 22.234 1.00 54.66 C
ATOM 21 C6 U A 83 73.347 -38.384 23.360 1.00 53.01 C
ATOM 22 P A A 84 72.006 -35.440 29.296 1.00 31.55 P
ATOM 23 OP1 A A 84 71.144 -36.536 29.728 1.00 31.57 O
ATOM 24 OP2 A A 84 71.469 -34.113 29.062 1.00 31.53 O
ATOM 25 O5' A A 84 73.202 -35.237 30.320 1.00 30.94 O
TER

ATOM 1 O3' U B 83 72.735 -35.932 27.970 1.00 34.04 O
ATOM 2 P A B 84 72.006 -35.440 29.296 1.00 31.55 P
ATOM 3 OP1 A B 84 71.144 -36.536 29.728 1.00 31.57 O
ATOM 4 OP2 A B 84 71.469 -34.113 29.062 1.00 31.53 O
ATOM 5 O5' A B 84 73.202 -35.237 30.320 1.00 30.94 O
ATOM 6 C5' A B 84 73.831 -36.307 30.999 1.00 36.05 C
ATOM 7 C4' A B 84 73.955 -35.892 32.444 1.00 34.06 C
ATOM 8 O4' A B 84 74.492 -34.559 32.525 1.00 33.28 O
ATOM 9 C3' A B 84 72.621 -35.822 33.153 1.00 36.64 C
ATOM 10 O3' A B 84 72.445 -37.068 33.739 1.00 41.69 O
ATOM 11 C2' A B 84 72.814 -34.735 34.194 1.00 33.68 C
ATOM 12 O2' A B 84 73.292 -35.274 35.407 1.00 36.65 O
ATOM 13 C1' A B 84 73.881 -33.840 33.577 1.00 32.60 C
ATOM 14 N9 A B 84 73.423 -32.566 33.014 1.00 29.85 N
ATOM 15 C8 A B 84 72.801 -32.336 31.817 1.00 30.44 C
ATOM 16 N7 A B 84 72.572 -31.065 31.577 1.00 28.48 N
ATOM 17 C5 A B 84 73.090 -30.422 32.692 1.00 28.68 C
ATOM 18 C6 A B 84 73.138 -29.069 33.097 1.00 31.60 C
ATOM 19 N6 A B 84 72.662 -28.043 32.384 1.00 27.59 N
ATOM 20 N1 A B 84 73.722 -28.799 34.280 1.00 30.45 N
ATOM 21 C2 A B 84 74.201 -29.801 35.023 1.00 31.32 C
ATOM 22 N3 A B 84 74.200 -31.104 34.751 1.00 31.00 N
ATOM 23 C4 A B 84 73.615 -31.343 33.579 1.00 30.42 C
ATOM 24 P A B 85 71.112 -37.907 33.650 1.00 39.44 P
ATOM 25 OP1 A B 85 71.419 -39.320 33.916 1.00 45.46 O
ATOM 26 OP2 A B 85 70.374 -37.592 32.452 1.00 35.56 O
ATOM 27 O5' A B 85 70.452 -37.306 34.980 1.00 46.06 O
TER

Atoms:
C4: (75.061,-39.630,22.236)
N3: (75.740,-39.583,23.441)
OP1: (69.764,-37.263,22.428)
OP2: (69.658,-39.474,23.769)
C2: (75.326,-38.980,24.604)
C1': (73.531,-37.695,25.752)
C3': (72.019,-36.253,26.807)
O5': (70.197,-37.326,24.867)
O4': (72.437,-38.495,26.128)
C5': (70.139,-37.844,26.182)
P: (69.422,-38.022,23.656)
C4': (71.484,-37.679,26.845)
C2': (72.972,-36.286,25.621)
O2': (74.001,-35.330,25.747)
N1: (74.092,-38.357,24.526)
O4: (75.572,-40.211,21.279)
O2: (76.013,-38.999,25.613)
C6: (73.347,-38.384,23.360)
C5: (73.775,-38.973,22.234)
O3': (72.735,-35.932,27.970)
OP1: (71.144,-36.536,29.728)
OP2: (71.469,-34.113,29.062)
C3': (72.621,-35.822,33.153)
C1': (73.881,-33.840,33.577)
C5': (73.831,-36.307,30.999)
O4': (74.492,-34.559,32.525)
C8: (72.801,-32.336,31.817)
O2': (73.292,-35.274,35.407)
C6: (73.138,-29.069,33.097)
C5: (73.090,-30.422,32.692)
C4: (73.615,-31.343,33.579)
P: (72.006,-35.440,29.296)
C4': (73.955,-35.892,32.444)
C2': (72.814,-34.735,34.194)
C2: (74.201,-29.801,35.023)
N1: (73.722,-28.799,34.280)
N3: (74.200,-31.104,34.751)
N6: (72.662,-28.043,32.384)
N7: (72.572,-31.065,31.577)
N9: (73.423,-32.566,33.014)
O5': (73.202,-35.237,30.320)
O3': (72.445,-37.068,33.739)
Image (generated by PyMOL):
PyMOL image
show in jmol