Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1400:A1401
Extra
PDB:
ATOM 1 O3' G A1399 0.888 -38.327 16.292 1.00 87.53 O
ATOM 2 P A A1400 1.008 -39.729 17.053 1.00 83.28 P
ATOM 3 OP1 A A1400 2.003 -39.481 18.133 1.00 82.75 O
ATOM 4 OP2 A A1400 1.254 -40.806 16.056 1.00 70.91 O
ATOM 5 O5' A A1400 -0.437 -39.938 17.709 1.00 91.42 O
ATOM 6 C5' A A1400 -1.627 -39.429 17.070 1.00 93.32 C
ATOM 7 C4' A A1400 -2.384 -38.506 18.012 1.00 91.91 C
ATOM 8 O4' A A1400 -1.398 -37.707 18.695 1.00 98.52 O
ATOM 9 C3' A A1400 -3.322 -37.490 17.344 1.00 90.48 C
ATOM 10 O3' A A1400 -4.734 -37.789 17.380 1.00 90.58 O
ATOM 11 C2' A A1400 -3.238 -36.255 18.257 1.00 90.78 C
ATOM 12 O2' A A1400 -4.349 -36.087 19.113 1.00 95.55 O
ATOM 13 C1' A A1400 -2.007 -36.522 19.123 1.00100.56 C
ATOM 14 N9 A A1400 -1.012 -35.450 19.213 1.00108.43 N
ATOM 15 C8 A A1400 0.280 -35.534 19.674 1.00106.13 C
ATOM 16 N7 A A1400 0.910 -34.384 19.689 1.00106.94 N
ATOM 17 C5 A A1400 -0.025 -33.482 19.193 1.00114.32 C
ATOM 18 C6 A A1400 0.022 -32.088 18.967 1.00123.04 C
ATOM 19 N6 A A1400 1.087 -31.327 19.231 1.00118.12 N
ATOM 20 N1 A A1400 -1.083 -31.495 18.457 1.00121.72 N
ATOM 21 C2 A A1400 -2.156 -32.249 18.203 1.00111.45 C
ATOM 22 N3 A A1400 -2.322 -33.559 18.380 1.00117.60 N
ATOM 23 C4 A A1400 -1.207 -34.125 18.883 1.00114.14 C
ATOM 24 P C A1401 -5.307 -39.275 17.093 1.00 89.21 P
ATOM 25 OP1 C A1401 -6.365 -39.604 18.089 1.00 86.98 O
ATOM 26 OP2 C A1401 -4.209 -40.231 16.873 1.00 74.78 O
ATOM 27 O5' C A1401 -6.046 -39.099 15.699 1.00 85.66 O
TER
ATOM 1 O3' A B1400 -4.734 -37.789 17.380 1.00 90.58 O
ATOM 2 P C B1401 -5.307 -39.275 17.093 1.00 89.21 P
ATOM 3 OP1 C B1401 -6.365 -39.604 18.089 1.00 86.98 O
ATOM 4 OP2 C B1401 -4.209 -40.231 16.873 1.00 74.78 O
ATOM 5 O5' C B1401 -6.046 -39.099 15.699 1.00 85.66 O
ATOM 6 C5' C B1401 -6.841 -37.944 15.408 1.00 85.79 C
ATOM 7 C4' C B1401 -6.998 -37.793 13.912 1.00 78.16 C
ATOM 8 O4' C B1401 -5.814 -37.177 13.325 1.00 73.73 O
ATOM 9 C3' C B1401 -7.161 -39.110 13.166 1.00 76.40 C
ATOM 10 O3' C B1401 -8.519 -39.510 13.204 1.00 70.47 O
ATOM 11 C2' C B1401 -6.673 -38.753 11.771 1.00 78.01 C
ATOM 12 O2' C B1401 -7.669 -38.018 11.102 1.00 76.41 O
ATOM 13 C1' C B1401 -5.525 -37.787 12.080 1.00 75.89 C
ATOM 14 N1 C B1401 -4.153 -38.375 12.144 1.00 79.75 N
ATOM 15 C2 C B1401 -3.512 -38.803 10.946 1.00 80.42 C
ATOM 16 O2 C B1401 -4.112 -38.698 9.869 1.00 80.30 O
ATOM 17 N3 C B1401 -2.254 -39.313 11.007 1.00 78.59 N
ATOM 18 C4 C B1401 -1.633 -39.415 12.186 1.00 82.36 C
ATOM 19 N4 C B1401 -0.392 -39.930 12.201 1.00 83.65 N
ATOM 20 C5 C B1401 -2.252 -38.995 13.411 1.00 81.41 C
ATOM 21 C6 C B1401 -3.501 -38.493 13.344 1.00 78.72 C
ATOM 22 P C B1402 -8.890 -41.065 13.195 1.00 65.93 P
ATOM 23 OP1 C B1402 -10.341 -41.087 13.482 1.00 74.82 O
ATOM 24 OP2 C B1402 -7.953 -41.835 14.068 1.00 60.79 O
ATOM 25 O5' C B1402 -8.666 -41.468 11.672 1.00 65.28 O
TER
ATOM 2 P A A1400 1.008 -39.729 17.053 1.00 83.28 P
ATOM 3 OP1 A A1400 2.003 -39.481 18.133 1.00 82.75 O
ATOM 4 OP2 A A1400 1.254 -40.806 16.056 1.00 70.91 O
ATOM 5 O5' A A1400 -0.437 -39.938 17.709 1.00 91.42 O
ATOM 6 C5' A A1400 -1.627 -39.429 17.070 1.00 93.32 C
ATOM 7 C4' A A1400 -2.384 -38.506 18.012 1.00 91.91 C
ATOM 8 O4' A A1400 -1.398 -37.707 18.695 1.00 98.52 O
ATOM 9 C3' A A1400 -3.322 -37.490 17.344 1.00 90.48 C
ATOM 10 O3' A A1400 -4.734 -37.789 17.380 1.00 90.58 O
ATOM 11 C2' A A1400 -3.238 -36.255 18.257 1.00 90.78 C
ATOM 12 O2' A A1400 -4.349 -36.087 19.113 1.00 95.55 O
ATOM 13 C1' A A1400 -2.007 -36.522 19.123 1.00100.56 C
ATOM 14 N9 A A1400 -1.012 -35.450 19.213 1.00108.43 N
ATOM 15 C8 A A1400 0.280 -35.534 19.674 1.00106.13 C
ATOM 16 N7 A A1400 0.910 -34.384 19.689 1.00106.94 N
ATOM 17 C5 A A1400 -0.025 -33.482 19.193 1.00114.32 C
ATOM 18 C6 A A1400 0.022 -32.088 18.967 1.00123.04 C
ATOM 19 N6 A A1400 1.087 -31.327 19.231 1.00118.12 N
ATOM 20 N1 A A1400 -1.083 -31.495 18.457 1.00121.72 N
ATOM 21 C2 A A1400 -2.156 -32.249 18.203 1.00111.45 C
ATOM 22 N3 A A1400 -2.322 -33.559 18.380 1.00117.60 N
ATOM 23 C4 A A1400 -1.207 -34.125 18.883 1.00114.14 C
ATOM 24 P C A1401 -5.307 -39.275 17.093 1.00 89.21 P
ATOM 25 OP1 C A1401 -6.365 -39.604 18.089 1.00 86.98 O
ATOM 26 OP2 C A1401 -4.209 -40.231 16.873 1.00 74.78 O
ATOM 27 O5' C A1401 -6.046 -39.099 15.699 1.00 85.66 O
TER
ATOM 1 O3' A B1400 -4.734 -37.789 17.380 1.00 90.58 O
ATOM 2 P C B1401 -5.307 -39.275 17.093 1.00 89.21 P
ATOM 3 OP1 C B1401 -6.365 -39.604 18.089 1.00 86.98 O
ATOM 4 OP2 C B1401 -4.209 -40.231 16.873 1.00 74.78 O
ATOM 5 O5' C B1401 -6.046 -39.099 15.699 1.00 85.66 O
ATOM 6 C5' C B1401 -6.841 -37.944 15.408 1.00 85.79 C
ATOM 7 C4' C B1401 -6.998 -37.793 13.912 1.00 78.16 C
ATOM 8 O4' C B1401 -5.814 -37.177 13.325 1.00 73.73 O
ATOM 9 C3' C B1401 -7.161 -39.110 13.166 1.00 76.40 C
ATOM 10 O3' C B1401 -8.519 -39.510 13.204 1.00 70.47 O
ATOM 11 C2' C B1401 -6.673 -38.753 11.771 1.00 78.01 C
ATOM 12 O2' C B1401 -7.669 -38.018 11.102 1.00 76.41 O
ATOM 13 C1' C B1401 -5.525 -37.787 12.080 1.00 75.89 C
ATOM 14 N1 C B1401 -4.153 -38.375 12.144 1.00 79.75 N
ATOM 15 C2 C B1401 -3.512 -38.803 10.946 1.00 80.42 C
ATOM 16 O2 C B1401 -4.112 -38.698 9.869 1.00 80.30 O
ATOM 17 N3 C B1401 -2.254 -39.313 11.007 1.00 78.59 N
ATOM 18 C4 C B1401 -1.633 -39.415 12.186 1.00 82.36 C
ATOM 19 N4 C B1401 -0.392 -39.930 12.201 1.00 83.65 N
ATOM 20 C5 C B1401 -2.252 -38.995 13.411 1.00 81.41 C
ATOM 21 C6 C B1401 -3.501 -38.493 13.344 1.00 78.72 C
ATOM 22 P C B1402 -8.890 -41.065 13.195 1.00 65.93 P
ATOM 23 OP1 C B1402 -10.341 -41.087 13.482 1.00 74.82 O
ATOM 24 OP2 C B1402 -7.953 -41.835 14.068 1.00 60.79 O
ATOM 25 O5' C B1402 -8.666 -41.468 11.672 1.00 65.28 O
TER
Atoms:
OP1: (2.003,-39.481,18.133)
OP2: (1.254,-40.806,16.056)
C3': (-3.322,-37.490,17.344)
C1': (-2.007,-36.522,19.123)
C5': (-1.627,-39.429,17.070)
O4': (-1.398,-37.707,18.695)
C8: (0.280,-35.534,19.674)
O2': (-4.349,-36.087,19.113)
C6: (0.022,-32.088,18.967)
C5: (-0.025,-33.482,19.193)
C4: (-1.207,-34.125,18.883)
P: (1.008,-39.729,17.053)
C4': (-2.384,-38.506,18.012)
C2': (-3.238,-36.255,18.257)
C2: (-2.156,-32.249,18.203)
N1: (-1.083,-31.495,18.457)
N3: (-2.322,-33.559,18.380)
N6: (1.087,-31.327,19.231)
N7: (0.910,-34.384,19.689)
N9: (-1.012,-35.450,19.213)
O5': (-0.437,-39.938,17.709)
O3': (-4.734,-37.789,17.380)
OP2: (1.254,-40.806,16.056)
C3': (-3.322,-37.490,17.344)
C1': (-2.007,-36.522,19.123)
C5': (-1.627,-39.429,17.070)
O4': (-1.398,-37.707,18.695)
C8: (0.280,-35.534,19.674)
O2': (-4.349,-36.087,19.113)
C6: (0.022,-32.088,18.967)
C5: (-0.025,-33.482,19.193)
C4: (-1.207,-34.125,18.883)
P: (1.008,-39.729,17.053)
C4': (-2.384,-38.506,18.012)
C2': (-3.238,-36.255,18.257)
C2: (-2.156,-32.249,18.203)
N1: (-1.083,-31.495,18.457)
N3: (-2.322,-33.559,18.380)
N6: (1.087,-31.327,19.231)
N7: (0.910,-34.384,19.689)
N9: (-1.012,-35.450,19.213)
O5': (-0.437,-39.938,17.709)
O3': (-4.734,-37.789,17.380)
C2: (-3.512,-38.803,10.946)
OP1: (-6.365,-39.604,18.089)
OP2: (-4.209,-40.231,16.873)
C4: (-1.633,-39.415,12.186)
O5': (-6.046,-39.099,15.699)
C3': (-7.161,-39.110,13.166)
C1': (-5.525,-37.787,12.080)
O4': (-5.814,-37.177,13.325)
C5': (-6.841,-37.944,15.408)
P: (-5.307,-39.275,17.093)
O2: (-4.112,-38.698,9.869)
C4': (-6.998,-37.793,13.912)
C2': (-6.673,-38.753,11.771)
O2': (-7.669,-38.018,11.102)
N1: (-4.153,-38.375,12.144)
N3: (-2.254,-39.313,11.007)
N4: (-0.392,-39.930,12.201)
C6: (-3.501,-38.493,13.344)
C5: (-2.252,-38.995,13.411)
O3': (-8.519,-39.510,13.204)
OP1: (-6.365,-39.604,18.089)
OP2: (-4.209,-40.231,16.873)
C4: (-1.633,-39.415,12.186)
O5': (-6.046,-39.099,15.699)
C3': (-7.161,-39.110,13.166)
C1': (-5.525,-37.787,12.080)
O4': (-5.814,-37.177,13.325)
C5': (-6.841,-37.944,15.408)
P: (-5.307,-39.275,17.093)
O2: (-4.112,-38.698,9.869)
C4': (-6.998,-37.793,13.912)
C2': (-6.673,-38.753,11.771)
O2': (-7.669,-38.018,11.102)
N1: (-4.153,-38.375,12.144)
N3: (-2.254,-39.313,11.007)
N4: (-0.392,-39.930,12.201)
C6: (-3.501,-38.493,13.344)
C5: (-2.252,-38.995,13.411)
O3': (-8.519,-39.510,13.204)
Image (generated by PyMOL):