Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01611:01612
Extra
PDB:
ATOM 1 O3' C A1610 118.204 146.209 71.152 1.00 51.79 O
ATOM 2 P A A1611 117.590 147.371 70.243 1.00 53.86 P
ATOM 3 OP1 A A1611 117.359 146.779 68.899 1.00 51.64 O
ATOM 4 OP2 A A1611 118.449 148.576 70.379 1.00 54.60 O
ATOM 5 O5' A A1611 116.183 147.685 70.921 1.00 53.38 O
ATOM 6 C5' A A1611 115.006 147.005 70.482 1.00 51.24 C
ATOM 7 C4' A A1611 113.938 147.998 70.105 1.00 50.60 C
ATOM 8 O4' A A1611 113.317 148.524 71.304 1.00 50.93 O
ATOM 9 C3' A A1611 114.362 149.205 69.280 1.00 50.72 C
ATOM 10 O3' A A1611 113.299 149.503 68.384 1.00 52.78 O
ATOM 11 C2' A A1611 114.491 150.297 70.343 1.00 49.80 C
ATOM 12 O2' A A1611 114.285 151.597 69.838 1.00 49.93 O
ATOM 13 C1' A A1611 113.347 149.933 71.278 1.00 49.34 C
ATOM 14 N9 A A1611 113.440 150.392 72.662 1.00 49.82 N
ATOM 15 C8 A A1611 114.401 150.105 73.603 1.00 49.77 C
ATOM 16 N7 A A1611 114.122 150.564 74.798 1.00 49.51 N
ATOM 17 C5 A A1611 112.909 151.219 74.627 1.00 50.67 C
ATOM 18 C6 A A1611 112.061 151.894 75.526 1.00 52.43 C
ATOM 19 N6 A A1611 112.297 151.989 76.837 1.00 53.96 N
ATOM 20 N1 A A1611 110.937 152.459 75.027 1.00 53.08 N
ATOM 21 C2 A A1611 110.679 152.327 73.718 1.00 52.27 C
ATOM 22 N3 A A1611 111.385 151.696 72.781 1.00 51.16 N
ATOM 23 C4 A A1611 112.500 151.156 73.308 1.00 50.52 C
ATOM 24 P U A1612 113.567 149.525 66.800 1.00 54.94 P
ATOM 25 OP1 U A1612 112.250 149.317 66.144 1.00 53.64 O
ATOM 26 OP2 U A1612 114.694 148.616 66.474 1.00 55.37 O
ATOM 27 O5' U A1612 114.040 151.019 66.526 1.00 53.16 O
TER
ATOM 1 O3' A B1611 113.299 149.503 68.384 1.00 52.78 O
ATOM 2 P U B1612 113.567 149.525 66.800 1.00 54.94 P
ATOM 3 OP1 U B1612 112.250 149.317 66.144 1.00 53.64 O
ATOM 4 OP2 U B1612 114.694 148.616 66.474 1.00 55.37 O
ATOM 5 O5' U B1612 114.040 151.019 66.526 1.00 53.16 O
ATOM 6 C5' U B1612 113.098 152.107 66.564 1.00 54.82 C
ATOM 7 C4' U B1612 113.708 153.336 65.948 1.00 54.72 C
ATOM 8 O4' U B1612 114.806 153.792 66.780 1.00 56.20 O
ATOM 9 C3' U B1612 114.305 153.115 64.569 1.00 54.91 C
ATOM 10 O3' U B1612 114.277 154.348 63.888 1.00 56.68 O
ATOM 11 C2' U B1612 115.748 152.763 64.894 1.00 54.98 C
ATOM 12 O2' U B1612 116.625 152.992 63.819 1.00 53.55 O
ATOM 13 C1' U B1612 116.019 153.727 66.047 1.00 56.62 C
ATOM 14 N1 U B1612 117.088 153.315 66.968 1.00 57.16 N
ATOM 15 C2 U B1612 118.219 154.095 67.039 1.00 56.45 C
ATOM 16 O2 U B1612 118.388 155.089 66.353 1.00 56.58 O
ATOM 17 N3 U B1612 119.152 153.667 67.947 1.00 56.95 N
ATOM 18 C4 U B1612 119.070 152.563 68.766 1.00 56.01 C
ATOM 19 O4 U B1612 119.961 152.346 69.578 1.00 57.06 O
ATOM 20 C5 U B1612 117.887 151.803 68.618 1.00 57.13 C
ATOM 21 C6 U B1612 116.958 152.191 67.749 1.00 58.24 C
ATOM 22 P G B1613 113.640 154.442 62.428 1.00 59.72 P
ATOM 23 OP1 G B1613 113.287 153.079 61.948 1.00 60.91 O
ATOM 24 OP2 G B1613 114.598 155.255 61.645 1.00 61.18 O
ATOM 25 O5' G B1613 112.316 155.313 62.659 1.00 61.18 O
TER
ATOM 2 P A A1611 117.590 147.371 70.243 1.00 53.86 P
ATOM 3 OP1 A A1611 117.359 146.779 68.899 1.00 51.64 O
ATOM 4 OP2 A A1611 118.449 148.576 70.379 1.00 54.60 O
ATOM 5 O5' A A1611 116.183 147.685 70.921 1.00 53.38 O
ATOM 6 C5' A A1611 115.006 147.005 70.482 1.00 51.24 C
ATOM 7 C4' A A1611 113.938 147.998 70.105 1.00 50.60 C
ATOM 8 O4' A A1611 113.317 148.524 71.304 1.00 50.93 O
ATOM 9 C3' A A1611 114.362 149.205 69.280 1.00 50.72 C
ATOM 10 O3' A A1611 113.299 149.503 68.384 1.00 52.78 O
ATOM 11 C2' A A1611 114.491 150.297 70.343 1.00 49.80 C
ATOM 12 O2' A A1611 114.285 151.597 69.838 1.00 49.93 O
ATOM 13 C1' A A1611 113.347 149.933 71.278 1.00 49.34 C
ATOM 14 N9 A A1611 113.440 150.392 72.662 1.00 49.82 N
ATOM 15 C8 A A1611 114.401 150.105 73.603 1.00 49.77 C
ATOM 16 N7 A A1611 114.122 150.564 74.798 1.00 49.51 N
ATOM 17 C5 A A1611 112.909 151.219 74.627 1.00 50.67 C
ATOM 18 C6 A A1611 112.061 151.894 75.526 1.00 52.43 C
ATOM 19 N6 A A1611 112.297 151.989 76.837 1.00 53.96 N
ATOM 20 N1 A A1611 110.937 152.459 75.027 1.00 53.08 N
ATOM 21 C2 A A1611 110.679 152.327 73.718 1.00 52.27 C
ATOM 22 N3 A A1611 111.385 151.696 72.781 1.00 51.16 N
ATOM 23 C4 A A1611 112.500 151.156 73.308 1.00 50.52 C
ATOM 24 P U A1612 113.567 149.525 66.800 1.00 54.94 P
ATOM 25 OP1 U A1612 112.250 149.317 66.144 1.00 53.64 O
ATOM 26 OP2 U A1612 114.694 148.616 66.474 1.00 55.37 O
ATOM 27 O5' U A1612 114.040 151.019 66.526 1.00 53.16 O
TER
ATOM 1 O3' A B1611 113.299 149.503 68.384 1.00 52.78 O
ATOM 2 P U B1612 113.567 149.525 66.800 1.00 54.94 P
ATOM 3 OP1 U B1612 112.250 149.317 66.144 1.00 53.64 O
ATOM 4 OP2 U B1612 114.694 148.616 66.474 1.00 55.37 O
ATOM 5 O5' U B1612 114.040 151.019 66.526 1.00 53.16 O
ATOM 6 C5' U B1612 113.098 152.107 66.564 1.00 54.82 C
ATOM 7 C4' U B1612 113.708 153.336 65.948 1.00 54.72 C
ATOM 8 O4' U B1612 114.806 153.792 66.780 1.00 56.20 O
ATOM 9 C3' U B1612 114.305 153.115 64.569 1.00 54.91 C
ATOM 10 O3' U B1612 114.277 154.348 63.888 1.00 56.68 O
ATOM 11 C2' U B1612 115.748 152.763 64.894 1.00 54.98 C
ATOM 12 O2' U B1612 116.625 152.992 63.819 1.00 53.55 O
ATOM 13 C1' U B1612 116.019 153.727 66.047 1.00 56.62 C
ATOM 14 N1 U B1612 117.088 153.315 66.968 1.00 57.16 N
ATOM 15 C2 U B1612 118.219 154.095 67.039 1.00 56.45 C
ATOM 16 O2 U B1612 118.388 155.089 66.353 1.00 56.58 O
ATOM 17 N3 U B1612 119.152 153.667 67.947 1.00 56.95 N
ATOM 18 C4 U B1612 119.070 152.563 68.766 1.00 56.01 C
ATOM 19 O4 U B1612 119.961 152.346 69.578 1.00 57.06 O
ATOM 20 C5 U B1612 117.887 151.803 68.618 1.00 57.13 C
ATOM 21 C6 U B1612 116.958 152.191 67.749 1.00 58.24 C
ATOM 22 P G B1613 113.640 154.442 62.428 1.00 59.72 P
ATOM 23 OP1 G B1613 113.287 153.079 61.948 1.00 60.91 O
ATOM 24 OP2 G B1613 114.598 155.255 61.645 1.00 61.18 O
ATOM 25 O5' G B1613 112.316 155.313 62.659 1.00 61.18 O
TER
Atoms:
OP1: (117.359,146.779,68.899)
OP2: (118.449,148.576,70.379)
C3': (114.362,149.205,69.280)
C1': (113.347,149.933,71.278)
C5': (115.006,147.005,70.482)
O4': (113.317,148.524,71.304)
C8: (114.401,150.105,73.603)
O2': (114.285,151.597,69.838)
C6: (112.061,151.894,75.526)
C5: (112.909,151.219,74.627)
C4: (112.500,151.156,73.308)
P: (117.590,147.371,70.243)
C4': (113.938,147.998,70.105)
C2': (114.491,150.297,70.343)
C2: (110.679,152.327,73.718)
N1: (110.937,152.459,75.027)
N3: (111.385,151.696,72.781)
N6: (112.297,151.989,76.837)
N7: (114.122,150.564,74.798)
N9: (113.440,150.392,72.662)
O5': (116.183,147.685,70.921)
O3': (113.299,149.503,68.384)
OP2: (118.449,148.576,70.379)
C3': (114.362,149.205,69.280)
C1': (113.347,149.933,71.278)
C5': (115.006,147.005,70.482)
O4': (113.317,148.524,71.304)
C8: (114.401,150.105,73.603)
O2': (114.285,151.597,69.838)
C6: (112.061,151.894,75.526)
C5: (112.909,151.219,74.627)
C4: (112.500,151.156,73.308)
P: (117.590,147.371,70.243)
C4': (113.938,147.998,70.105)
C2': (114.491,150.297,70.343)
C2: (110.679,152.327,73.718)
N1: (110.937,152.459,75.027)
N3: (111.385,151.696,72.781)
N6: (112.297,151.989,76.837)
N7: (114.122,150.564,74.798)
N9: (113.440,150.392,72.662)
O5': (116.183,147.685,70.921)
O3': (113.299,149.503,68.384)
C4: (119.070,152.563,68.766)
N3: (119.152,153.667,67.947)
OP1: (112.250,149.317,66.144)
OP2: (114.694,148.616,66.474)
C2: (118.219,154.095,67.039)
C1': (116.019,153.727,66.047)
C3': (114.305,153.115,64.569)
O5': (114.040,151.019,66.526)
O4': (114.806,153.792,66.780)
C5': (113.098,152.107,66.564)
P: (113.567,149.525,66.800)
C4': (113.708,153.336,65.948)
C2': (115.748,152.763,64.894)
O2': (116.625,152.992,63.819)
N1: (117.088,153.315,66.968)
O4: (119.961,152.346,69.578)
O2: (118.388,155.089,66.353)
C6: (116.958,152.191,67.749)
C5: (117.887,151.803,68.618)
O3': (114.277,154.348,63.888)
N3: (119.152,153.667,67.947)
OP1: (112.250,149.317,66.144)
OP2: (114.694,148.616,66.474)
C2: (118.219,154.095,67.039)
C1': (116.019,153.727,66.047)
C3': (114.305,153.115,64.569)
O5': (114.040,151.019,66.526)
O4': (114.806,153.792,66.780)
C5': (113.098,152.107,66.564)
P: (113.567,149.525,66.800)
C4': (113.708,153.336,65.948)
C2': (115.748,152.763,64.894)
O2': (116.625,152.992,63.819)
N1: (117.088,153.315,66.968)
O4: (119.961,152.346,69.578)
O2: (118.388,155.089,66.353)
C6: (116.958,152.191,67.749)
C5: (117.887,151.803,68.618)
O3': (114.277,154.348,63.888)
Image (generated by PyMOL):