ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1250:A1582

Extra

PDB:
ATOM 1 O3' U A1249 -30.815 -43.831 0.938 1.00 33.89 O
ATOM 2 P A A1250 -31.652 -45.178 1.036 1.00 20.66 P
ATOM 3 OP1 A A1250 -32.059 -45.506 -0.356 1.00 17.64 O
ATOM 4 OP2 A A1250 -32.698 -45.027 2.075 1.00 17.64 O
ATOM 5 O5' A A1250 -30.559 -46.233 1.499 1.00 61.34 O
ATOM 6 C5' A A1250 -30.750 -47.064 2.650 1.00 61.34 C
ATOM 7 C4' A A1250 -30.493 -48.493 2.271 1.00 61.34 C
ATOM 8 O4' A A1250 -29.322 -48.533 1.424 1.00 61.34 O
ATOM 9 C3' A A1250 -30.210 -49.490 3.384 1.00 61.34 C
ATOM 10 O3' A A1250 -31.425 -49.925 4.056 1.00 61.34 O
ATOM 11 C2' A A1250 -29.391 -50.570 2.677 1.00 61.34 C
ATOM 12 O2' A A1250 -30.242 -51.463 2.009 1.00 61.34 O
ATOM 13 C1' A A1250 -28.693 -49.781 1.567 1.00 61.34 C
ATOM 14 N9 A A1250 -27.231 -49.632 1.525 1.00 24.21 N
ATOM 15 C8 A A1250 -26.362 -50.602 1.088 1.00 24.21 C
ATOM 16 N7 A A1250 -25.109 -50.221 1.053 1.00 24.21 N
ATOM 17 C5 A A1250 -25.143 -48.922 1.520 1.00 24.21 C
ATOM 18 C6 A A1250 -24.136 -47.989 1.724 1.00 24.21 C
ATOM 19 N6 A A1250 -22.857 -48.244 1.499 1.00 24.21 N
ATOM 20 N1 A A1250 -24.484 -46.773 2.181 1.00 24.21 N
ATOM 21 C2 A A1250 -25.771 -46.532 2.432 1.00 24.21 C
ATOM 22 N3 A A1250 -26.823 -47.343 2.298 1.00 24.21 N
ATOM 23 C4 A A1250 -26.438 -48.542 1.826 1.00 24.21 C
ATOM 24 P A A1251 -32.593 -50.748 3.271 1.00 26.12 P
ATOM 25 OP1 A A1251 -32.713 -50.269 1.862 1.00 29.70 O
ATOM 26 OP2 A A1251 -33.793 -50.766 4.141 1.00 29.70 O
ATOM 27 O5' A A1251 -32.086 -52.252 3.233 1.00 17.88 O
TER

ATOM 1 O3' C B1581 -16.081 -53.128 -6.027 1.00 17.02 O
ATOM 2 P A B1582 -15.941 -54.413 -5.060 1.00 50.93 P
ATOM 3 OP1 A B1582 -14.652 -55.072 -5.394 1.00 41.58 O
ATOM 4 OP2 A B1582 -17.198 -55.198 -5.120 1.00 41.58 O
ATOM 5 O5' A B1582 -15.803 -53.798 -3.600 1.00 28.71 O
ATOM 6 C5' A B1582 -14.551 -53.291 -3.133 1.00 28.71 C
ATOM 7 C4' A B1582 -14.702 -52.773 -1.734 1.00 28.71 C
ATOM 8 O4' A B1582 -15.636 -51.669 -1.748 1.00 28.71 O
ATOM 9 C3' A B1582 -15.288 -53.747 -0.724 1.00 28.71 C
ATOM 10 O3' A B1582 -14.311 -54.620 -0.160 1.00 28.71 O
ATOM 11 C2' A B1582 -15.876 -52.814 0.325 1.00 28.71 C
ATOM 12 O2' A B1582 -14.908 -52.336 1.242 1.00 28.71 O
ATOM 13 C1' A B1582 -16.364 -51.653 -0.536 1.00 28.71 C
ATOM 14 N9 A B1582 -17.792 -51.757 -0.832 1.00 22.39 N
ATOM 15 C8 A B1582 -18.409 -52.337 -1.903 1.00 22.39 C
ATOM 16 N7 A B1582 -19.717 -52.264 -1.863 1.00 22.39 N
ATOM 17 C5 A B1582 -19.976 -51.591 -0.684 1.00 22.39 C
ATOM 18 C6 A B1582 -21.171 -51.198 -0.063 1.00 22.39 C
ATOM 19 N6 A B1582 -22.380 -51.448 -0.565 1.00 22.39 N
ATOM 20 N1 A B1582 -21.086 -50.534 1.109 1.00 22.39 N
ATOM 21 C2 A B1582 -19.874 -50.293 1.618 1.00 22.39 C
ATOM 22 N3 A B1582 -18.677 -50.616 1.132 1.00 22.39 N
ATOM 23 C4 A B1582 -18.801 -51.271 -0.038 1.00 22.39 C
ATOM 24 P G B1583 -14.698 -56.154 0.155 1.00 45.58 P
ATOM 25 OP1 G B1583 -13.623 -56.694 1.025 1.00 54.22 O
ATOM 26 OP2 G B1583 -15.023 -56.846 -1.124 1.00 54.22 O
ATOM 27 O5' G B1583 -16.043 -56.048 1.005 1.00 22.39 O
TER

Atoms:
OP1: (-32.059,-45.506,-0.356)
OP2: (-32.698,-45.027,2.075)
C3': (-30.210,-49.490,3.384)
C1': (-28.693,-49.781,1.567)
C5': (-30.750,-47.064,2.650)
O4': (-29.322,-48.533,1.424)
C8: (-26.362,-50.602,1.088)
O2': (-30.242,-51.463,2.009)
C6: (-24.136,-47.989,1.724)
C5: (-25.143,-48.922,1.520)
C4: (-26.438,-48.542,1.826)
P: (-31.652,-45.178,1.036)
C4': (-30.493,-48.493,2.271)
C2': (-29.391,-50.570,2.677)
C2: (-25.771,-46.532,2.432)
N1: (-24.484,-46.773,2.181)
N3: (-26.823,-47.343,2.298)
N6: (-22.857,-48.244,1.499)
N7: (-25.109,-50.221,1.053)
N9: (-27.231,-49.632,1.525)
O5': (-30.559,-46.233,1.499)
O3': (-31.425,-49.925,4.056)
OP1: (-14.652,-55.072,-5.394)
OP2: (-17.198,-55.198,-5.120)
C3': (-15.288,-53.747,-0.724)
C1': (-16.364,-51.653,-0.536)
C5': (-14.551,-53.291,-3.133)
O4': (-15.636,-51.669,-1.748)
C8: (-18.409,-52.337,-1.903)
O2': (-14.908,-52.336,1.242)
C6: (-21.171,-51.198,-0.063)
C5: (-19.976,-51.591,-0.684)
C4: (-18.801,-51.271,-0.038)
P: (-15.941,-54.413,-5.060)
C4': (-14.702,-52.773,-1.734)
C2': (-15.876,-52.814,0.325)
C2: (-19.874,-50.293,1.618)
N1: (-21.086,-50.534,1.109)
N3: (-18.677,-50.616,1.132)
N6: (-22.380,-51.448,-0.565)
N7: (-19.717,-52.264,-1.863)
N9: (-17.792,-51.757,-0.832)
O5': (-15.803,-53.798,-3.600)
O3': (-14.311,-54.620,-0.160)
Image (generated by PyMOL):
PyMOL image
show in jmol