Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BOY:D4:D5
Extra
PDB:
ATOM 1 O3' A A 3 11.614 -14.700 23.979 1.00 25.62 O
ATOM 2 P G A 4 13.174 -14.783 24.396 1.00 29.34 P
ATOM 3 OP1 G A 4 13.808 -13.919 23.391 1.00 28.95 O
ATOM 4 OP2 G A 4 13.510 -16.194 24.644 1.00 29.65 O
ATOM 5 O5' G A 4 13.237 -13.957 25.795 1.00 26.14 O
ATOM 6 C5' G A 4 12.781 -12.572 25.877 1.00 26.45 C
ATOM 7 C4' G A 4 12.678 -12.249 27.347 1.00 26.62 C
ATOM 8 O4' G A 4 11.773 -13.201 27.933 1.00 24.46 O
ATOM 9 C3' G A 4 14.020 -12.438 28.047 1.00 28.21 C
ATOM 10 O3' G A 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 11 C2' G A 4 13.910 -13.787 28.739 1.00 25.27 C
ATOM 12 O2' G A 4 14.575 -13.847 29.985 1.00 26.49 O
ATOM 13 C1' G A 4 12.393 -13.945 28.945 1.00 23.78 C
ATOM 14 N9 G A 4 12.019 -15.345 28.924 1.00 22.76 N
ATOM 15 C8 G A 4 12.470 -16.336 28.067 1.00 21.34 C
ATOM 16 N7 G A 4 11.971 -17.502 28.349 1.00 21.96 N
ATOM 17 C5 G A 4 11.137 -17.288 29.430 1.00 21.00 C
ATOM 18 C6 G A 4 10.333 -18.192 30.179 1.00 22.37 C
ATOM 19 O6 G A 4 10.174 -19.399 30.042 1.00 21.58 O
ATOM 20 N1 G A 4 9.609 -17.549 31.208 1.00 20.98 N
ATOM 21 C2 G A 4 9.712 -16.197 31.468 1.00 21.22 C
ATOM 22 N2 G A 4 8.967 -15.727 32.500 1.00 21.03 N
ATOM 23 N3 G A 4 10.485 -15.348 30.793 1.00 19.84 N
ATOM 24 C4 G A 4 11.158 -15.967 29.785 1.00 23.54 C
ATOM 25 P U A 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 26 OP1 U A 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 27 OP2 U A 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 28 O5' U A 5 15.976 -9.848 29.912 1.00 44.56 O
TER
ATOM 1 O3' G B 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 2 P U B 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 3 OP1 U B 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 4 OP2 U B 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 5 O5' U B 5 15.976 -9.848 29.912 1.00 44.56 O
ATOM 6 C5' U B 5 15.287 -9.051 30.876 1.00 52.60 C
ATOM 7 C4' U B 5 16.123 -8.586 32.057 1.00 57.14 C
ATOM 8 O4' U B 5 16.170 -9.651 33.028 1.00 59.10 O
ATOM 9 C3' U B 5 17.558 -8.135 31.775 1.00 59.63 C
ATOM 10 O3' U B 5 17.723 -6.835 32.327 1.00 60.43 O
ATOM 11 C2' U B 5 18.464 -9.153 32.474 1.00 60.59 C
ATOM 12 O2' U B 5 19.403 -8.557 33.358 1.00 60.95 O
ATOM 13 C1' U B 5 17.507 -10.055 33.262 1.00 61.97 C
ATOM 14 N1 U B 5 17.611 -11.508 32.906 1.00 63.33 N
ATOM 15 C2 U B 5 17.806 -12.432 33.923 1.00 63.97 C
ATOM 16 O2 U B 5 17.905 -12.148 35.106 1.00 64.03 O
ATOM 17 N3 U B 5 17.883 -13.732 33.486 1.00 64.33 N
ATOM 18 C4 U B 5 17.791 -14.187 32.179 1.00 63.54 C
ATOM 19 O4 U B 5 17.883 -15.387 31.975 1.00 63.53 O
ATOM 20 C5 U B 5 17.583 -13.176 31.169 1.00 64.15 C
ATOM 21 C6 U B 5 17.498 -11.902 31.575 1.00 63.86 C
ATOM 22 P U B 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 23 OP1 U B 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 24 OP2 U B 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 25 O5' U B 6 17.539 -4.358 32.307 1.00 60.18 O
TER
ATOM 2 P G A 4 13.174 -14.783 24.396 1.00 29.34 P
ATOM 3 OP1 G A 4 13.808 -13.919 23.391 1.00 28.95 O
ATOM 4 OP2 G A 4 13.510 -16.194 24.644 1.00 29.65 O
ATOM 5 O5' G A 4 13.237 -13.957 25.795 1.00 26.14 O
ATOM 6 C5' G A 4 12.781 -12.572 25.877 1.00 26.45 C
ATOM 7 C4' G A 4 12.678 -12.249 27.347 1.00 26.62 C
ATOM 8 O4' G A 4 11.773 -13.201 27.933 1.00 24.46 O
ATOM 9 C3' G A 4 14.020 -12.438 28.047 1.00 28.21 C
ATOM 10 O3' G A 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 11 C2' G A 4 13.910 -13.787 28.739 1.00 25.27 C
ATOM 12 O2' G A 4 14.575 -13.847 29.985 1.00 26.49 O
ATOM 13 C1' G A 4 12.393 -13.945 28.945 1.00 23.78 C
ATOM 14 N9 G A 4 12.019 -15.345 28.924 1.00 22.76 N
ATOM 15 C8 G A 4 12.470 -16.336 28.067 1.00 21.34 C
ATOM 16 N7 G A 4 11.971 -17.502 28.349 1.00 21.96 N
ATOM 17 C5 G A 4 11.137 -17.288 29.430 1.00 21.00 C
ATOM 18 C6 G A 4 10.333 -18.192 30.179 1.00 22.37 C
ATOM 19 O6 G A 4 10.174 -19.399 30.042 1.00 21.58 O
ATOM 20 N1 G A 4 9.609 -17.549 31.208 1.00 20.98 N
ATOM 21 C2 G A 4 9.712 -16.197 31.468 1.00 21.22 C
ATOM 22 N2 G A 4 8.967 -15.727 32.500 1.00 21.03 N
ATOM 23 N3 G A 4 10.485 -15.348 30.793 1.00 19.84 N
ATOM 24 C4 G A 4 11.158 -15.967 29.785 1.00 23.54 C
ATOM 25 P U A 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 26 OP1 U A 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 27 OP2 U A 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 28 O5' U A 5 15.976 -9.848 29.912 1.00 44.56 O
TER
ATOM 1 O3' G B 4 14.267 -11.389 28.978 1.00 35.18 O
ATOM 2 P U B 5 15.156 -10.127 28.588 1.00 40.94 P
ATOM 3 OP1 U B 5 14.197 -9.018 28.334 1.00 46.35 O
ATOM 4 OP2 U B 5 16.056 -10.466 27.474 1.00 45.05 O
ATOM 5 O5' U B 5 15.976 -9.848 29.912 1.00 44.56 O
ATOM 6 C5' U B 5 15.287 -9.051 30.876 1.00 52.60 C
ATOM 7 C4' U B 5 16.123 -8.586 32.057 1.00 57.14 C
ATOM 8 O4' U B 5 16.170 -9.651 33.028 1.00 59.10 O
ATOM 9 C3' U B 5 17.558 -8.135 31.775 1.00 59.63 C
ATOM 10 O3' U B 5 17.723 -6.835 32.327 1.00 60.43 O
ATOM 11 C2' U B 5 18.464 -9.153 32.474 1.00 60.59 C
ATOM 12 O2' U B 5 19.403 -8.557 33.358 1.00 60.95 O
ATOM 13 C1' U B 5 17.507 -10.055 33.262 1.00 61.97 C
ATOM 14 N1 U B 5 17.611 -11.508 32.906 1.00 63.33 N
ATOM 15 C2 U B 5 17.806 -12.432 33.923 1.00 63.97 C
ATOM 16 O2 U B 5 17.905 -12.148 35.106 1.00 64.03 O
ATOM 17 N3 U B 5 17.883 -13.732 33.486 1.00 64.33 N
ATOM 18 C4 U B 5 17.791 -14.187 32.179 1.00 63.54 C
ATOM 19 O4 U B 5 17.883 -15.387 31.975 1.00 63.53 O
ATOM 20 C5 U B 5 17.583 -13.176 31.169 1.00 64.15 C
ATOM 21 C6 U B 5 17.498 -11.902 31.575 1.00 63.86 C
ATOM 22 P U B 6 18.046 -5.578 31.402 1.00 61.30 P
ATOM 23 OP1 U B 6 17.184 -5.636 30.199 1.00 61.92 O
ATOM 24 OP2 U B 6 19.518 -5.497 31.257 1.00 60.94 O
ATOM 25 O5' U B 6 17.539 -4.358 32.307 1.00 60.18 O
TER
Atoms:
OP1: (13.808,-13.919,23.391)
OP2: (13.510,-16.194,24.644)
C3': (14.020,-12.438,28.047)
C1': (12.393,-13.945,28.945)
C5': (12.781,-12.572,25.877)
O6: (10.174,-19.399,30.042)
O4': (11.773,-13.201,27.933)
C8: (12.470,-16.336,28.067)
C2: (9.712,-16.197,31.468)
C6: (10.333,-18.192,30.179)
C5: (11.137,-17.288,29.430)
C4: (11.158,-15.967,29.785)
P: (13.174,-14.783,24.396)
C4': (12.678,-12.249,27.347)
C2': (13.910,-13.787,28.739)
O2': (14.575,-13.847,29.985)
N1: (9.609,-17.549,31.208)
N2: (8.967,-15.727,32.500)
N3: (10.485,-15.348,30.793)
N7: (11.971,-17.502,28.349)
N9: (12.019,-15.345,28.924)
O5': (13.237,-13.957,25.795)
O3': (14.267,-11.389,28.978)
OP2: (13.510,-16.194,24.644)
C3': (14.020,-12.438,28.047)
C1': (12.393,-13.945,28.945)
C5': (12.781,-12.572,25.877)
O6: (10.174,-19.399,30.042)
O4': (11.773,-13.201,27.933)
C8: (12.470,-16.336,28.067)
C2: (9.712,-16.197,31.468)
C6: (10.333,-18.192,30.179)
C5: (11.137,-17.288,29.430)
C4: (11.158,-15.967,29.785)
P: (13.174,-14.783,24.396)
C4': (12.678,-12.249,27.347)
C2': (13.910,-13.787,28.739)
O2': (14.575,-13.847,29.985)
N1: (9.609,-17.549,31.208)
N2: (8.967,-15.727,32.500)
N3: (10.485,-15.348,30.793)
N7: (11.971,-17.502,28.349)
N9: (12.019,-15.345,28.924)
O5': (13.237,-13.957,25.795)
O3': (14.267,-11.389,28.978)
C4: (17.791,-14.187,32.179)
N3: (17.883,-13.732,33.486)
OP1: (14.197,-9.018,28.334)
OP2: (16.056,-10.466,27.474)
C2: (17.806,-12.432,33.923)
C1': (17.507,-10.055,33.262)
C3': (17.558,-8.135,31.775)
O5': (15.976,-9.848,29.912)
O4': (16.170,-9.651,33.028)
C5': (15.287,-9.051,30.876)
P: (15.156,-10.127,28.588)
C4': (16.123,-8.586,32.057)
C2': (18.464,-9.153,32.474)
O2': (19.403,-8.557,33.358)
N1: (17.611,-11.508,32.906)
O4: (17.883,-15.387,31.975)
O2: (17.905,-12.148,35.106)
C6: (17.498,-11.902,31.575)
C5: (17.583,-13.176,31.169)
O3': (17.723,-6.835,32.327)
N3: (17.883,-13.732,33.486)
OP1: (14.197,-9.018,28.334)
OP2: (16.056,-10.466,27.474)
C2: (17.806,-12.432,33.923)
C1': (17.507,-10.055,33.262)
C3': (17.558,-8.135,31.775)
O5': (15.976,-9.848,29.912)
O4': (16.170,-9.651,33.028)
C5': (15.287,-9.051,30.876)
P: (15.156,-10.127,28.588)
C4': (16.123,-8.586,32.057)
C2': (18.464,-9.153,32.474)
O2': (19.403,-8.557,33.358)
N1: (17.611,-11.508,32.906)
O4: (17.883,-15.387,31.975)
O2: (17.905,-12.148,35.106)
C6: (17.498,-11.902,31.575)
C5: (17.583,-13.176,31.169)
O3': (17.723,-6.835,32.327)
Image (generated by PyMOL):