Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3BOY:D18:D19
Extra
PDB:
ATOM 1 O3' A A 17 2.939 3.399 6.412 1.00 26.15 O
ATOM 2 P G A 18 3.815 2.533 5.340 1.00 29.60 P
ATOM 3 OP1 G A 18 5.176 2.681 5.856 1.00 28.93 O
ATOM 4 OP2 G A 18 3.348 2.886 3.997 1.00 27.53 O
ATOM 5 O5' G A 18 3.374 1.014 5.663 1.00 27.77 O
ATOM 6 C5' G A 18 3.458 0.496 7.006 1.00 26.42 C
ATOM 7 C4' G A 18 2.635 -0.769 7.008 1.00 26.71 C
ATOM 8 O4' G A 18 1.308 -0.388 6.660 1.00 24.60 O
ATOM 9 C3' G A 18 3.084 -1.759 5.936 1.00 28.75 C
ATOM 10 O3' G A 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 11 C2' G A 18 2.088 -1.578 4.796 1.00 26.05 C
ATOM 12 O2' G A 18 1.806 -2.755 4.054 1.00 27.90 O
ATOM 13 C1' G A 18 0.837 -1.068 5.536 1.00 22.82 C
ATOM 14 N9 G A 18 0.033 -0.223 4.663 1.00 22.47 N
ATOM 15 C8 G A 18 0.484 0.750 3.795 1.00 19.87 C
ATOM 16 N7 G A 18 -0.464 1.297 3.096 1.00 20.95 N
ATOM 17 C5 G A 18 -1.632 0.680 3.541 1.00 20.62 C
ATOM 18 C6 G A 18 -2.989 0.862 3.168 1.00 20.23 C
ATOM 19 O6 G A 18 -3.502 1.601 2.342 1.00 20.66 O
ATOM 20 N1 G A 18 -3.879 0.037 3.886 1.00 20.18 N
ATOM 21 C2 G A 18 -3.451 -0.870 4.826 1.00 19.83 C
ATOM 22 N2 G A 18 -4.452 -1.582 5.417 1.00 19.70 N
ATOM 23 N3 G A 18 -2.176 -1.067 5.178 1.00 19.06 N
ATOM 24 C4 G A 18 -1.325 -0.249 4.503 1.00 22.64 C
ATOM 25 P U A 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 26 OP1 U A 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 27 OP2 U A 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 28 O5' U A 19 4.168 -5.317 6.509 1.00 44.57 O
TER
ATOM 1 O3' G B 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 2 P U B 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 3 OP1 U B 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 4 OP2 U B 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 5 O5' U B 19 4.168 -5.317 6.509 1.00 44.57 O
ATOM 6 C5' U B 19 3.656 -6.084 7.587 1.00 52.33 C
ATOM 7 C4' U B 19 3.525 -7.538 7.159 1.00 57.28 C
ATOM 8 O4' U B 19 2.605 -7.638 6.042 1.00 58.35 O
ATOM 9 C3' U B 19 4.830 -8.229 6.755 1.00 59.33 C
ATOM 10 O3' U B 19 5.084 -9.375 7.587 1.00 60.14 O
ATOM 11 C2' U B 19 4.684 -8.558 5.262 1.00 60.60 C
ATOM 12 O2' U B 19 5.036 -9.896 4.948 1.00 61.69 O
ATOM 13 C1' U B 19 3.205 -8.301 4.943 1.00 61.83 C
ATOM 14 N1 U B 19 2.953 -7.445 3.722 1.00 63.66 N
ATOM 15 C2 U B 19 2.287 -7.977 2.619 1.00 64.28 C
ATOM 16 O2 U B 19 1.881 -9.125 2.542 1.00 64.51 O
ATOM 17 N3 U B 19 2.109 -7.096 1.576 1.00 64.44 N
ATOM 18 C4 U B 19 2.516 -5.769 1.522 1.00 63.88 C
ATOM 19 O4 U B 19 2.276 -5.113 0.517 1.00 64.03 O
ATOM 20 C5 U B 19 3.198 -5.276 2.697 1.00 64.55 C
ATOM 21 C6 U B 19 3.380 -6.118 3.727 1.00 64.35 C
ATOM 22 P U B 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 23 OP1 U B 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 24 OP2 U B 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 25 O5' U B 20 6.594 -10.925 8.949 1.00 60.41 O
TER
ATOM 2 P G A 18 3.815 2.533 5.340 1.00 29.60 P
ATOM 3 OP1 G A 18 5.176 2.681 5.856 1.00 28.93 O
ATOM 4 OP2 G A 18 3.348 2.886 3.997 1.00 27.53 O
ATOM 5 O5' G A 18 3.374 1.014 5.663 1.00 27.77 O
ATOM 6 C5' G A 18 3.458 0.496 7.006 1.00 26.42 C
ATOM 7 C4' G A 18 2.635 -0.769 7.008 1.00 26.71 C
ATOM 8 O4' G A 18 1.308 -0.388 6.660 1.00 24.60 O
ATOM 9 C3' G A 18 3.084 -1.759 5.936 1.00 28.75 C
ATOM 10 O3' G A 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 11 C2' G A 18 2.088 -1.578 4.796 1.00 26.05 C
ATOM 12 O2' G A 18 1.806 -2.755 4.054 1.00 27.90 O
ATOM 13 C1' G A 18 0.837 -1.068 5.536 1.00 22.82 C
ATOM 14 N9 G A 18 0.033 -0.223 4.663 1.00 22.47 N
ATOM 15 C8 G A 18 0.484 0.750 3.795 1.00 19.87 C
ATOM 16 N7 G A 18 -0.464 1.297 3.096 1.00 20.95 N
ATOM 17 C5 G A 18 -1.632 0.680 3.541 1.00 20.62 C
ATOM 18 C6 G A 18 -2.989 0.862 3.168 1.00 20.23 C
ATOM 19 O6 G A 18 -3.502 1.601 2.342 1.00 20.66 O
ATOM 20 N1 G A 18 -3.879 0.037 3.886 1.00 20.18 N
ATOM 21 C2 G A 18 -3.451 -0.870 4.826 1.00 19.83 C
ATOM 22 N2 G A 18 -4.452 -1.582 5.417 1.00 19.70 N
ATOM 23 N3 G A 18 -2.176 -1.067 5.178 1.00 19.06 N
ATOM 24 C4 G A 18 -1.325 -0.249 4.503 1.00 22.64 C
ATOM 25 P U A 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 26 OP1 U A 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 27 OP2 U A 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 28 O5' U A 19 4.168 -5.317 6.509 1.00 44.57 O
TER
ATOM 1 O3' G B 18 3.097 -3.067 6.465 1.00 34.96 O
ATOM 2 P U B 19 4.501 -3.780 6.691 1.00 39.69 P
ATOM 3 OP1 U B 19 5.022 -3.444 8.030 1.00 43.11 O
ATOM 4 OP2 U B 19 5.305 -3.422 5.503 1.00 44.10 O
ATOM 5 O5' U B 19 4.168 -5.317 6.509 1.00 44.57 O
ATOM 6 C5' U B 19 3.656 -6.084 7.587 1.00 52.33 C
ATOM 7 C4' U B 19 3.525 -7.538 7.159 1.00 57.28 C
ATOM 8 O4' U B 19 2.605 -7.638 6.042 1.00 58.35 O
ATOM 9 C3' U B 19 4.830 -8.229 6.755 1.00 59.33 C
ATOM 10 O3' U B 19 5.084 -9.375 7.587 1.00 60.14 O
ATOM 11 C2' U B 19 4.684 -8.558 5.262 1.00 60.60 C
ATOM 12 O2' U B 19 5.036 -9.896 4.948 1.00 61.69 O
ATOM 13 C1' U B 19 3.205 -8.301 4.943 1.00 61.83 C
ATOM 14 N1 U B 19 2.953 -7.445 3.722 1.00 63.66 N
ATOM 15 C2 U B 19 2.287 -7.977 2.619 1.00 64.28 C
ATOM 16 O2 U B 19 1.881 -9.125 2.542 1.00 64.51 O
ATOM 17 N3 U B 19 2.109 -7.096 1.576 1.00 64.44 N
ATOM 18 C4 U B 19 2.516 -5.769 1.522 1.00 63.88 C
ATOM 19 O4 U B 19 2.276 -5.113 0.517 1.00 64.03 O
ATOM 20 C5 U B 19 3.198 -5.276 2.697 1.00 64.55 C
ATOM 21 C6 U B 19 3.380 -6.118 3.727 1.00 64.35 C
ATOM 22 P U B 20 6.467 -9.428 8.389 1.00 61.13 P
ATOM 23 OP1 U B 20 6.403 -8.473 9.520 1.00 60.82 O
ATOM 24 OP2 U B 20 7.530 -9.292 7.364 1.00 61.59 O
ATOM 25 O5' U B 20 6.594 -10.925 8.949 1.00 60.41 O
TER
Atoms:
OP1: (5.176,2.681,5.856)
OP2: (3.348,2.886,3.997)
C3': (3.084,-1.759,5.936)
C1': (0.837,-1.068,5.536)
C5': (3.458,0.496,7.006)
O6: (-3.502,1.601,2.342)
O4': (1.308,-0.388,6.660)
C8: (0.484,0.750,3.795)
C2: (-3.451,-0.870,4.826)
C6: (-2.989,0.862,3.168)
C5: (-1.632,0.680,3.541)
C4: (-1.325,-0.249,4.503)
P: (3.815,2.533,5.340)
C4': (2.635,-0.769,7.008)
C2': (2.088,-1.578,4.796)
O2': (1.806,-2.755,4.054)
N1: (-3.879,0.037,3.886)
N2: (-4.452,-1.582,5.417)
N3: (-2.176,-1.067,5.178)
N7: (-0.464,1.297,3.096)
N9: (0.033,-0.223,4.663)
O5': (3.374,1.014,5.663)
O3': (3.097,-3.067,6.465)
OP2: (3.348,2.886,3.997)
C3': (3.084,-1.759,5.936)
C1': (0.837,-1.068,5.536)
C5': (3.458,0.496,7.006)
O6: (-3.502,1.601,2.342)
O4': (1.308,-0.388,6.660)
C8: (0.484,0.750,3.795)
C2: (-3.451,-0.870,4.826)
C6: (-2.989,0.862,3.168)
C5: (-1.632,0.680,3.541)
C4: (-1.325,-0.249,4.503)
P: (3.815,2.533,5.340)
C4': (2.635,-0.769,7.008)
C2': (2.088,-1.578,4.796)
O2': (1.806,-2.755,4.054)
N1: (-3.879,0.037,3.886)
N2: (-4.452,-1.582,5.417)
N3: (-2.176,-1.067,5.178)
N7: (-0.464,1.297,3.096)
N9: (0.033,-0.223,4.663)
O5': (3.374,1.014,5.663)
O3': (3.097,-3.067,6.465)
C4: (2.516,-5.769,1.522)
N3: (2.109,-7.096,1.576)
OP1: (5.022,-3.444,8.030)
OP2: (5.305,-3.422,5.503)
C2: (2.287,-7.977,2.619)
C1': (3.205,-8.301,4.943)
C3': (4.830,-8.229,6.755)
O5': (4.168,-5.317,6.509)
O4': (2.605,-7.638,6.042)
C5': (3.656,-6.084,7.587)
P: (4.501,-3.780,6.691)
C4': (3.525,-7.538,7.159)
C2': (4.684,-8.558,5.262)
O2': (5.036,-9.896,4.948)
N1: (2.953,-7.445,3.722)
O4: (2.276,-5.113,0.517)
O2: (1.881,-9.125,2.542)
C6: (3.380,-6.118,3.727)
C5: (3.198,-5.276,2.697)
O3': (5.084,-9.375,7.587)
N3: (2.109,-7.096,1.576)
OP1: (5.022,-3.444,8.030)
OP2: (5.305,-3.422,5.503)
C2: (2.287,-7.977,2.619)
C1': (3.205,-8.301,4.943)
C3': (4.830,-8.229,6.755)
O5': (4.168,-5.317,6.509)
O4': (2.605,-7.638,6.042)
C5': (3.656,-6.084,7.587)
P: (4.501,-3.780,6.691)
C4': (3.525,-7.538,7.159)
C2': (4.684,-8.558,5.262)
O2': (5.036,-9.896,4.948)
N1: (2.953,-7.445,3.722)
O4: (2.276,-5.113,0.517)
O2: (1.881,-9.125,2.542)
C6: (3.380,-6.118,3.727)
C5: (3.198,-5.276,2.697)
O3': (5.084,-9.375,7.587)
Image (generated by PyMOL):