ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0448:0443

Extra

PDB:
ATOM 1 O3' A A 447 45.968 139.162 53.296 1.00 40.13 O
ATOM 2 P A A 448 44.521 138.483 53.246 1.00 43.16 P
ATOM 3 OP1 A A 448 43.898 138.686 54.567 1.00 43.27 O
ATOM 4 OP2 A A 448 44.630 137.110 52.687 1.00 41.84 O
ATOM 5 O5' A A 448 43.714 139.398 52.224 1.00 42.92 O
ATOM 6 C5' A A 448 44.065 139.441 50.828 1.00 42.24 C
ATOM 7 C4' A A 448 42.891 139.932 50.014 1.00 43.35 C
ATOM 8 O4' A A 448 41.865 138.908 49.955 1.00 42.64 O
ATOM 9 C3' A A 448 42.198 141.189 50.529 1.00 43.57 C
ATOM 10 O3' A A 448 41.713 141.921 49.415 1.00 44.45 O
ATOM 11 C2' A A 448 41.026 140.618 51.318 1.00 43.10 C
ATOM 12 O2' A A 448 39.938 141.507 51.435 1.00 42.65 O
ATOM 13 C1' A A 448 40.645 139.425 50.450 1.00 43.07 C
ATOM 14 N9 A A 448 39.968 138.349 51.162 1.00 44.83 N
ATOM 15 C8 A A 448 40.235 137.860 52.412 1.00 46.71 C
ATOM 16 N7 A A 448 39.490 136.841 52.748 1.00 48.91 N
ATOM 17 C5 A A 448 38.669 136.652 51.647 1.00 48.60 C
ATOM 18 C6 A A 448 37.664 135.710 51.366 1.00 49.67 C
ATOM 19 N6 A A 448 37.298 134.742 52.207 1.00 50.19 N
ATOM 20 N1 A A 448 37.042 135.797 50.176 1.00 49.56 N
ATOM 21 C2 A A 448 37.408 136.767 49.334 1.00 49.30 C
ATOM 22 N3 A A 448 38.335 137.706 49.482 1.00 48.98 N
ATOM 23 C4 A A 448 38.940 137.588 50.673 1.00 47.08 C
ATOM 24 P C A 449 42.546 143.172 48.868 1.00 46.49 P
ATOM 25 OP1 C A 449 41.758 143.731 47.739 1.00 48.14 O
ATOM 26 OP2 C A 449 43.953 142.749 48.646 1.00 45.40 O
ATOM 27 O5' C A 449 42.477 144.207 50.070 1.00 46.71 O
TER

ATOM 1 O3' U B 442 43.110 131.637 62.345 1.00 36.58 O
ATOM 2 P A B 443 43.931 131.038 61.103 1.00 39.24 P
ATOM 3 OP1 A B 443 44.871 130.000 61.596 1.00 35.40 O
ATOM 4 OP2 A B 443 44.448 132.174 60.318 1.00 37.97 O
ATOM 5 O5' A B 443 42.818 130.335 60.213 1.00 40.21 O
ATOM 6 C5' A B 443 41.989 129.279 60.739 1.00 40.37 C
ATOM 7 C4' A B 443 41.039 128.792 59.670 1.00 40.11 C
ATOM 8 O4' A B 443 40.037 129.801 59.382 1.00 40.41 O
ATOM 9 C3' A B 443 41.700 128.538 58.334 1.00 38.73 C
ATOM 10 O3' A B 443 42.266 127.255 58.302 1.00 36.01 O
ATOM 11 C2' A B 443 40.548 128.670 57.360 1.00 39.56 C
ATOM 12 O2' A B 443 39.767 127.497 57.357 1.00 42.69 O
ATOM 13 C1' A B 443 39.751 129.807 57.996 1.00 40.01 C
ATOM 14 N9 A B 443 40.057 131.141 57.481 1.00 42.89 N
ATOM 15 C8 A B 443 40.522 132.210 58.203 1.00 44.87 C
ATOM 16 N7 A B 443 40.649 133.308 57.504 1.00 45.50 N
ATOM 17 C5 A B 443 40.254 132.939 56.231 1.00 44.74 C
ATOM 18 C6 A B 443 40.155 133.660 55.040 1.00 44.84 C
ATOM 19 N6 A B 443 40.450 134.956 54.942 1.00 44.33 N
ATOM 20 N1 A B 443 39.734 133.001 53.942 1.00 45.14 N
ATOM 21 C2 A B 443 39.434 131.698 54.053 1.00 46.23 C
ATOM 22 N3 A B 443 39.486 130.908 55.122 1.00 44.56 N
ATOM 23 C4 A B 443 39.905 131.600 56.195 1.00 44.75 C
ATOM 24 P G B 444 43.698 127.055 57.640 1.00 37.60 P
ATOM 25 OP1 G B 444 43.963 125.591 57.630 1.00 39.00 O
ATOM 26 OP2 G B 444 44.634 127.965 58.332 1.00 38.13 O
ATOM 27 O5' G B 444 43.507 127.560 56.142 1.00 36.34 O
TER

Atoms:
OP1: (43.898,138.686,54.567)
OP2: (44.630,137.110,52.687)
C3': (42.198,141.189,50.529)
C1': (40.645,139.425,50.450)
C5': (44.065,139.441,50.828)
O4': (41.865,138.908,49.955)
C8: (40.235,137.860,52.412)
O2': (39.938,141.507,51.435)
C6: (37.664,135.710,51.366)
C5: (38.669,136.652,51.647)
C4: (38.940,137.588,50.673)
P: (44.521,138.483,53.246)
C4': (42.891,139.932,50.014)
C2': (41.026,140.618,51.318)
C2: (37.408,136.767,49.334)
N1: (37.042,135.797,50.176)
N3: (38.335,137.706,49.482)
N6: (37.298,134.742,52.207)
N7: (39.490,136.841,52.748)
N9: (39.968,138.349,51.162)
O5': (43.714,139.398,52.224)
O3': (41.713,141.921,49.415)
OP1: (44.871,130.000,61.596)
OP2: (44.448,132.174,60.318)
C3': (41.700,128.538,58.334)
C1': (39.751,129.807,57.996)
C5': (41.989,129.279,60.739)
O4': (40.037,129.801,59.382)
C8: (40.522,132.210,58.203)
O2': (39.767,127.497,57.357)
C6: (40.155,133.660,55.040)
C5: (40.254,132.939,56.231)
C4: (39.905,131.600,56.195)
P: (43.931,131.038,61.103)
C4': (41.039,128.792,59.670)
C2': (40.548,128.670,57.360)
C2: (39.434,131.698,54.053)
N1: (39.734,133.001,53.942)
N3: (39.486,130.908,55.122)
N6: (40.450,134.956,54.942)
N7: (40.649,133.308,57.504)
N9: (40.057,131.141,57.481)
O5': (42.818,130.335,60.213)
O3': (42.266,127.255,58.302)
Image (generated by PyMOL):
PyMOL image
show in jmol