Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1867:1868
Extra
PDB:
ATOM 1 O3' U A 866 30.434 4.873 92.041 1.00 36.01 O
ATOM 2 P C A 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 3 OP1 C A 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 4 OP2 C A 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 5 O5' C A 867 28.055 4.275 91.536 1.00 35.93 O
ATOM 6 C5' C A 867 28.388 3.059 90.912 1.00 35.71 C
ATOM 7 C4' C A 867 27.633 1.923 91.518 1.00 35.74 C
ATOM 8 O4' C A 867 28.214 1.613 92.790 1.00 35.90 O
ATOM 9 C3' C A 867 26.175 2.196 91.801 1.00 35.89 C
ATOM 10 O3' C A 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 11 C2' C A 867 26.228 2.622 93.247 1.00 36.16 C
ATOM 12 O2' C A 867 25.020 2.544 93.952 1.00 36.35 O
ATOM 13 C1' C A 867 27.240 1.668 93.777 1.00 36.12 C
ATOM 14 N1 C A 867 27.857 2.134 94.996 1.00 36.34 N
ATOM 15 C2 C A 867 27.797 1.269 96.026 1.00 36.46 C
ATOM 16 O2 C A 867 27.278 0.172 95.768 1.00 36.35 O
ATOM 17 N3 C A 867 28.310 1.655 97.211 1.00 36.69 N
ATOM 18 C4 C A 867 28.842 2.858 97.369 1.00 36.80 C
ATOM 19 N4 C A 867 29.327 3.185 98.570 1.00 37.05 N
ATOM 20 C5 C A 867 28.897 3.775 96.281 1.00 36.67 C
ATOM 21 C6 C A 867 28.392 3.373 95.124 1.00 36.44 C
ATOM 22 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 23 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 24 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 25 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
TER
ATOM 1 O3' C B 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 2 P G B 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 3 OP1 G B 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 4 OP2 G B 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 5 O5' G B 868 23.777 -0.623 90.696 1.00 38.53 O
ATOM 6 C5' G B 868 24.023 -1.424 91.831 1.00 38.63 C
ATOM 7 C4' G B 868 24.130 -2.854 91.450 1.00 38.48 C
ATOM 8 O4' G B 868 22.850 -3.278 90.908 1.00 38.47 O
ATOM 9 C3' G B 868 25.156 -3.127 90.386 1.00 38.24 C
ATOM 10 O3' G B 868 25.702 -4.419 90.591 1.00 38.18 O
ATOM 11 C2' G B 868 24.336 -3.091 89.100 1.00 38.12 C
ATOM 12 O2' G B 868 24.862 -3.840 88.022 1.00 37.90 O
ATOM 13 C1' G B 868 22.992 -3.645 89.551 1.00 38.25 C
ATOM 14 N9 G B 868 21.867 -3.078 88.810 1.00 38.26 N
ATOM 15 C8 G B 868 21.672 -1.747 88.598 1.00 38.32 C
ATOM 16 N7 G B 868 20.632 -1.453 87.895 1.00 38.33 N
ATOM 17 C5 G B 868 20.080 -2.692 87.658 1.00 38.28 C
ATOM 18 C6 G B 868 18.912 -3.025 86.963 1.00 38.28 C
ATOM 19 O6 G B 868 18.123 -2.225 86.419 1.00 38.34 O
ATOM 20 N1 G B 868 18.726 -4.395 86.939 1.00 38.23 N
ATOM 21 C2 G B 868 19.537 -5.322 87.498 1.00 38.19 C
ATOM 22 N2 G B 868 19.243 -6.627 87.385 1.00 38.16 N
ATOM 23 N3 G B 868 20.607 -5.000 88.140 1.00 38.19 N
ATOM 24 C4 G B 868 20.830 -3.691 88.184 1.00 38.23 C
ATOM 25 P A B 869 27.205 -4.582 91.159 1.00 41.47 P
ATOM 26 OP1 A B 869 28.099 -3.637 90.369 1.00 41.34 O
ATOM 27 OP2 A B 869 27.497 -6.001 91.158 1.00 41.40 O
ATOM 28 O5' A B 869 27.074 -4.087 92.635 1.00 41.73 O
TER
ATOM 2 P C A 867 29.050 5.505 91.523 1.00 36.00 P
ATOM 3 OP1 C A 867 29.278 5.986 90.113 1.00 35.82 O
ATOM 4 OP2 C A 867 28.635 6.477 92.551 1.00 36.29 O
ATOM 5 O5' C A 867 28.055 4.275 91.536 1.00 35.93 O
ATOM 6 C5' C A 867 28.388 3.059 90.912 1.00 35.71 C
ATOM 7 C4' C A 867 27.633 1.923 91.518 1.00 35.74 C
ATOM 8 O4' C A 867 28.214 1.613 92.790 1.00 35.90 O
ATOM 9 C3' C A 867 26.175 2.196 91.801 1.00 35.89 C
ATOM 10 O3' C A 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 11 C2' C A 867 26.228 2.622 93.247 1.00 36.16 C
ATOM 12 O2' C A 867 25.020 2.544 93.952 1.00 36.35 O
ATOM 13 C1' C A 867 27.240 1.668 93.777 1.00 36.12 C
ATOM 14 N1 C A 867 27.857 2.134 94.996 1.00 36.34 N
ATOM 15 C2 C A 867 27.797 1.269 96.026 1.00 36.46 C
ATOM 16 O2 C A 867 27.278 0.172 95.768 1.00 36.35 O
ATOM 17 N3 C A 867 28.310 1.655 97.211 1.00 36.69 N
ATOM 18 C4 C A 867 28.842 2.858 97.369 1.00 36.80 C
ATOM 19 N4 C A 867 29.327 3.185 98.570 1.00 37.05 N
ATOM 20 C5 C A 867 28.897 3.775 96.281 1.00 36.67 C
ATOM 21 C6 C A 867 28.392 3.373 95.124 1.00 36.44 C
ATOM 22 P G A 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 23 OP1 G A 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 24 OP2 G A 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 25 O5' G A 868 23.777 -0.623 90.696 1.00 38.53 O
TER
ATOM 1 O3' C B 867 25.441 0.979 91.675 1.00 35.82 O
ATOM 2 P G B 868 24.150 0.910 90.695 1.00 38.61 P
ATOM 3 OP1 G B 868 24.597 1.301 89.346 1.00 38.41 O
ATOM 4 OP2 G B 868 23.074 1.692 91.366 1.00 38.85 O
ATOM 5 O5' G B 868 23.777 -0.623 90.696 1.00 38.53 O
ATOM 6 C5' G B 868 24.023 -1.424 91.831 1.00 38.63 C
ATOM 7 C4' G B 868 24.130 -2.854 91.450 1.00 38.48 C
ATOM 8 O4' G B 868 22.850 -3.278 90.908 1.00 38.47 O
ATOM 9 C3' G B 868 25.156 -3.127 90.386 1.00 38.24 C
ATOM 10 O3' G B 868 25.702 -4.419 90.591 1.00 38.18 O
ATOM 11 C2' G B 868 24.336 -3.091 89.100 1.00 38.12 C
ATOM 12 O2' G B 868 24.862 -3.840 88.022 1.00 37.90 O
ATOM 13 C1' G B 868 22.992 -3.645 89.551 1.00 38.25 C
ATOM 14 N9 G B 868 21.867 -3.078 88.810 1.00 38.26 N
ATOM 15 C8 G B 868 21.672 -1.747 88.598 1.00 38.32 C
ATOM 16 N7 G B 868 20.632 -1.453 87.895 1.00 38.33 N
ATOM 17 C5 G B 868 20.080 -2.692 87.658 1.00 38.28 C
ATOM 18 C6 G B 868 18.912 -3.025 86.963 1.00 38.28 C
ATOM 19 O6 G B 868 18.123 -2.225 86.419 1.00 38.34 O
ATOM 20 N1 G B 868 18.726 -4.395 86.939 1.00 38.23 N
ATOM 21 C2 G B 868 19.537 -5.322 87.498 1.00 38.19 C
ATOM 22 N2 G B 868 19.243 -6.627 87.385 1.00 38.16 N
ATOM 23 N3 G B 868 20.607 -5.000 88.140 1.00 38.19 N
ATOM 24 C4 G B 868 20.830 -3.691 88.184 1.00 38.23 C
ATOM 25 P A B 869 27.205 -4.582 91.159 1.00 41.47 P
ATOM 26 OP1 A B 869 28.099 -3.637 90.369 1.00 41.34 O
ATOM 27 OP2 A B 869 27.497 -6.001 91.158 1.00 41.40 O
ATOM 28 O5' A B 869 27.074 -4.087 92.635 1.00 41.73 O
TER
Atoms:
C2: (27.797,1.269,96.026)
OP1: (29.278,5.986,90.113)
OP2: (28.635,6.477,92.551)
C4: (28.842,2.858,97.369)
O5': (28.055,4.275,91.536)
C3': (26.175,2.196,91.801)
C1': (27.240,1.668,93.777)
O4': (28.214,1.613,92.790)
C5': (28.388,3.059,90.912)
P: (29.050,5.505,91.523)
O2: (27.278,0.172,95.768)
C4': (27.633,1.923,91.518)
C2': (26.228,2.622,93.247)
O2': (25.020,2.544,93.952)
N1: (27.857,2.134,94.996)
N3: (28.310,1.655,97.211)
N4: (29.327,3.185,98.570)
C6: (28.392,3.373,95.124)
C5: (28.897,3.775,96.281)
O3': (25.441,0.979,91.675)
OP1: (29.278,5.986,90.113)
OP2: (28.635,6.477,92.551)
C4: (28.842,2.858,97.369)
O5': (28.055,4.275,91.536)
C3': (26.175,2.196,91.801)
C1': (27.240,1.668,93.777)
O4': (28.214,1.613,92.790)
C5': (28.388,3.059,90.912)
P: (29.050,5.505,91.523)
O2: (27.278,0.172,95.768)
C4': (27.633,1.923,91.518)
C2': (26.228,2.622,93.247)
O2': (25.020,2.544,93.952)
N1: (27.857,2.134,94.996)
N3: (28.310,1.655,97.211)
N4: (29.327,3.185,98.570)
C6: (28.392,3.373,95.124)
C5: (28.897,3.775,96.281)
O3': (25.441,0.979,91.675)
OP1: (24.597,1.301,89.346)
OP2: (23.074,1.692,91.366)
C3': (25.156,-3.127,90.386)
C1': (22.992,-3.645,89.551)
C5': (24.023,-1.424,91.831)
O6: (18.123,-2.225,86.419)
O4': (22.850,-3.278,90.908)
C8: (21.672,-1.747,88.598)
C2: (19.537,-5.322,87.498)
C6: (18.912,-3.025,86.963)
C5: (20.080,-2.692,87.658)
C4: (20.830,-3.691,88.184)
P: (24.150,0.910,90.695)
C4': (24.130,-2.854,91.450)
C2': (24.336,-3.091,89.100)
O2': (24.862,-3.840,88.022)
N1: (18.726,-4.395,86.939)
N2: (19.243,-6.627,87.385)
N3: (20.607,-5.000,88.140)
N7: (20.632,-1.453,87.895)
N9: (21.867,-3.078,88.810)
O5': (23.777,-0.623,90.696)
O3': (25.702,-4.419,90.591)
OP2: (23.074,1.692,91.366)
C3': (25.156,-3.127,90.386)
C1': (22.992,-3.645,89.551)
C5': (24.023,-1.424,91.831)
O6: (18.123,-2.225,86.419)
O4': (22.850,-3.278,90.908)
C8: (21.672,-1.747,88.598)
C2: (19.537,-5.322,87.498)
C6: (18.912,-3.025,86.963)
C5: (20.080,-2.692,87.658)
C4: (20.830,-3.691,88.184)
P: (24.150,0.910,90.695)
C4': (24.130,-2.854,91.450)
C2': (24.336,-3.091,89.100)
O2': (24.862,-3.840,88.022)
N1: (18.726,-4.395,86.939)
N2: (19.243,-6.627,87.385)
N3: (20.607,-5.000,88.140)
N7: (20.632,-1.453,87.895)
N9: (21.867,-3.078,88.810)
O5': (23.777,-0.623,90.696)
O3': (25.702,-4.419,90.591)
Image (generated by PyMOL):