Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A428:A409
Extra
PDB:
ATOM 1 O3' U A 427 -60.261 36.168 66.461 1.00 17.82 O
ATOM 2 P A A 428 -59.777 37.245 67.547 1.00 4.50 P
ATOM 3 OP1 A A 428 -59.422 38.485 66.814 1.00 4.50 O
ATOM 4 OP2 A A 428 -58.735 36.576 68.355 1.00 4.50 O
ATOM 5 O5' A A 428 -61.086 37.490 68.446 1.00 4.50 O
ATOM 6 C5' A A 428 -61.393 36.639 69.552 1.00 4.50 C
ATOM 7 C4' A A 428 -62.083 37.384 70.677 1.00 4.50 C
ATOM 8 O4' A A 428 -62.902 38.454 70.142 1.00 4.50 O
ATOM 9 C3' A A 428 -63.066 36.583 71.525 1.00 4.50 C
ATOM 10 O3' A A 428 -62.432 35.756 72.490 1.00 4.50 O
ATOM 11 C2' A A 428 -63.927 37.678 72.141 1.00 4.50 C
ATOM 12 O2' A A 428 -63.268 38.261 73.245 1.00 4.50 O
ATOM 13 C1' A A 428 -63.984 38.711 71.016 1.00 4.50 C
ATOM 14 N9 A A 428 -65.235 38.631 70.257 1.00 4.98 N
ATOM 15 C8 A A 428 -65.350 38.595 68.902 1.00 4.98 C
ATOM 16 N7 A A 428 -66.581 38.515 68.454 1.00 4.98 N
ATOM 17 C5 A A 428 -67.334 38.483 69.623 1.00 4.98 C
ATOM 18 C6 A A 428 -68.733 38.392 69.846 1.00 4.98 C
ATOM 19 N6 A A 428 -69.594 38.308 68.831 1.00 4.98 N
ATOM 20 N1 A A 428 -69.208 38.387 71.119 1.00 4.98 N
ATOM 21 C2 A A 428 -68.296 38.461 72.090 1.00 4.98 C
ATOM 22 N3 A A 428 -66.960 38.535 72.001 1.00 4.98 N
ATOM 23 C4 A A 428 -66.517 38.555 70.732 1.00 4.98 C
ATOM 24 P A A 429 -62.805 34.190 72.601 1.00 19.43 P
ATOM 25 OP1 A A 429 -61.810 33.562 73.517 1.00 19.43 O
ATOM 26 OP2 A A 429 -62.931 33.670 71.221 1.00 19.43 O
ATOM 27 O5' A A 429 -64.223 34.201 73.288 1.00 19.43 O
TER
ATOM 1 O3' G B 408 -67.680 30.939 62.238 1.00 16.71 O
ATOM 2 P A B 409 -67.612 32.060 61.072 1.00 29.14 P
ATOM 3 OP1 A B 409 -66.832 31.470 59.959 1.00 29.14 O
ATOM 4 OP2 A B 409 -67.115 33.299 61.689 1.00 29.14 O
ATOM 5 O5' A B 409 -69.157 32.254 60.638 1.00 29.14 O
ATOM 6 C5' A B 409 -70.231 32.221 61.596 1.00 29.14 C
ATOM 7 C4' A B 409 -71.271 33.308 61.345 1.00 29.14 C
ATOM 8 O4' A B 409 -71.054 34.399 62.283 1.00 29.14 O
ATOM 9 C3' A B 409 -71.234 33.952 59.962 1.00 29.14 C
ATOM 10 O3' A B 409 -72.518 34.522 59.640 1.00 29.14 O
ATOM 11 C2' A B 409 -70.239 35.086 60.168 1.00 29.14 C
ATOM 12 O2' A B 409 -70.338 36.125 59.219 1.00 29.14 O
ATOM 13 C1' A B 409 -70.597 35.561 61.589 1.00 29.14 C
ATOM 14 N9 A B 409 -69.448 36.094 62.340 1.00 29.16 N
ATOM 15 C8 A B 409 -68.211 36.432 61.846 1.00 29.16 C
ATOM 16 N7 A B 409 -67.341 36.829 62.743 1.00 29.16 N
ATOM 17 C5 A B 409 -68.046 36.723 63.922 1.00 29.16 C
ATOM 18 C6 A B 409 -67.661 36.999 65.241 1.00 29.16 C
ATOM 19 N6 A B 409 -66.441 37.446 65.565 1.00 29.16 N
ATOM 20 N1 A B 409 -68.590 36.806 66.204 1.00 29.16 N
ATOM 21 C2 A B 409 -69.807 36.361 65.840 1.00 29.16 C
ATOM 22 N3 A B 409 -70.277 36.069 64.630 1.00 29.16 N
ATOM 23 C4 A B 409 -69.335 36.270 63.700 1.00 29.16 C
ATOM 24 P A B 410 -73.840 33.601 59.480 1.00 30.94 P
ATOM 25 OP1 A B 410 -73.407 32.323 58.848 1.00 30.94 O
ATOM 26 OP2 A B 410 -74.869 34.442 58.792 1.00 30.94 O
ATOM 27 O5' A B 410 -74.273 33.334 61.003 1.00 30.94 O
TER
ATOM 2 P A A 428 -59.777 37.245 67.547 1.00 4.50 P
ATOM 3 OP1 A A 428 -59.422 38.485 66.814 1.00 4.50 O
ATOM 4 OP2 A A 428 -58.735 36.576 68.355 1.00 4.50 O
ATOM 5 O5' A A 428 -61.086 37.490 68.446 1.00 4.50 O
ATOM 6 C5' A A 428 -61.393 36.639 69.552 1.00 4.50 C
ATOM 7 C4' A A 428 -62.083 37.384 70.677 1.00 4.50 C
ATOM 8 O4' A A 428 -62.902 38.454 70.142 1.00 4.50 O
ATOM 9 C3' A A 428 -63.066 36.583 71.525 1.00 4.50 C
ATOM 10 O3' A A 428 -62.432 35.756 72.490 1.00 4.50 O
ATOM 11 C2' A A 428 -63.927 37.678 72.141 1.00 4.50 C
ATOM 12 O2' A A 428 -63.268 38.261 73.245 1.00 4.50 O
ATOM 13 C1' A A 428 -63.984 38.711 71.016 1.00 4.50 C
ATOM 14 N9 A A 428 -65.235 38.631 70.257 1.00 4.98 N
ATOM 15 C8 A A 428 -65.350 38.595 68.902 1.00 4.98 C
ATOM 16 N7 A A 428 -66.581 38.515 68.454 1.00 4.98 N
ATOM 17 C5 A A 428 -67.334 38.483 69.623 1.00 4.98 C
ATOM 18 C6 A A 428 -68.733 38.392 69.846 1.00 4.98 C
ATOM 19 N6 A A 428 -69.594 38.308 68.831 1.00 4.98 N
ATOM 20 N1 A A 428 -69.208 38.387 71.119 1.00 4.98 N
ATOM 21 C2 A A 428 -68.296 38.461 72.090 1.00 4.98 C
ATOM 22 N3 A A 428 -66.960 38.535 72.001 1.00 4.98 N
ATOM 23 C4 A A 428 -66.517 38.555 70.732 1.00 4.98 C
ATOM 24 P A A 429 -62.805 34.190 72.601 1.00 19.43 P
ATOM 25 OP1 A A 429 -61.810 33.562 73.517 1.00 19.43 O
ATOM 26 OP2 A A 429 -62.931 33.670 71.221 1.00 19.43 O
ATOM 27 O5' A A 429 -64.223 34.201 73.288 1.00 19.43 O
TER
ATOM 1 O3' G B 408 -67.680 30.939 62.238 1.00 16.71 O
ATOM 2 P A B 409 -67.612 32.060 61.072 1.00 29.14 P
ATOM 3 OP1 A B 409 -66.832 31.470 59.959 1.00 29.14 O
ATOM 4 OP2 A B 409 -67.115 33.299 61.689 1.00 29.14 O
ATOM 5 O5' A B 409 -69.157 32.254 60.638 1.00 29.14 O
ATOM 6 C5' A B 409 -70.231 32.221 61.596 1.00 29.14 C
ATOM 7 C4' A B 409 -71.271 33.308 61.345 1.00 29.14 C
ATOM 8 O4' A B 409 -71.054 34.399 62.283 1.00 29.14 O
ATOM 9 C3' A B 409 -71.234 33.952 59.962 1.00 29.14 C
ATOM 10 O3' A B 409 -72.518 34.522 59.640 1.00 29.14 O
ATOM 11 C2' A B 409 -70.239 35.086 60.168 1.00 29.14 C
ATOM 12 O2' A B 409 -70.338 36.125 59.219 1.00 29.14 O
ATOM 13 C1' A B 409 -70.597 35.561 61.589 1.00 29.14 C
ATOM 14 N9 A B 409 -69.448 36.094 62.340 1.00 29.16 N
ATOM 15 C8 A B 409 -68.211 36.432 61.846 1.00 29.16 C
ATOM 16 N7 A B 409 -67.341 36.829 62.743 1.00 29.16 N
ATOM 17 C5 A B 409 -68.046 36.723 63.922 1.00 29.16 C
ATOM 18 C6 A B 409 -67.661 36.999 65.241 1.00 29.16 C
ATOM 19 N6 A B 409 -66.441 37.446 65.565 1.00 29.16 N
ATOM 20 N1 A B 409 -68.590 36.806 66.204 1.00 29.16 N
ATOM 21 C2 A B 409 -69.807 36.361 65.840 1.00 29.16 C
ATOM 22 N3 A B 409 -70.277 36.069 64.630 1.00 29.16 N
ATOM 23 C4 A B 409 -69.335 36.270 63.700 1.00 29.16 C
ATOM 24 P A B 410 -73.840 33.601 59.480 1.00 30.94 P
ATOM 25 OP1 A B 410 -73.407 32.323 58.848 1.00 30.94 O
ATOM 26 OP2 A B 410 -74.869 34.442 58.792 1.00 30.94 O
ATOM 27 O5' A B 410 -74.273 33.334 61.003 1.00 30.94 O
TER
Atoms:
OP1: (-59.422,38.485,66.814)
OP2: (-58.735,36.576,68.355)
C3': (-63.066,36.583,71.525)
C1': (-63.984,38.711,71.016)
C5': (-61.393,36.639,69.552)
O4': (-62.902,38.454,70.142)
C8: (-65.350,38.595,68.902)
O2': (-63.268,38.261,73.245)
C6: (-68.733,38.392,69.846)
C5: (-67.334,38.483,69.623)
C4: (-66.517,38.555,70.732)
P: (-59.777,37.245,67.547)
C4': (-62.083,37.384,70.677)
C2': (-63.927,37.678,72.141)
C2: (-68.296,38.461,72.090)
N1: (-69.208,38.387,71.119)
N3: (-66.960,38.535,72.001)
N6: (-69.594,38.308,68.831)
N7: (-66.581,38.515,68.454)
N9: (-65.235,38.631,70.257)
O5': (-61.086,37.490,68.446)
O3': (-62.432,35.756,72.490)
OP2: (-58.735,36.576,68.355)
C3': (-63.066,36.583,71.525)
C1': (-63.984,38.711,71.016)
C5': (-61.393,36.639,69.552)
O4': (-62.902,38.454,70.142)
C8: (-65.350,38.595,68.902)
O2': (-63.268,38.261,73.245)
C6: (-68.733,38.392,69.846)
C5: (-67.334,38.483,69.623)
C4: (-66.517,38.555,70.732)
P: (-59.777,37.245,67.547)
C4': (-62.083,37.384,70.677)
C2': (-63.927,37.678,72.141)
C2: (-68.296,38.461,72.090)
N1: (-69.208,38.387,71.119)
N3: (-66.960,38.535,72.001)
N6: (-69.594,38.308,68.831)
N7: (-66.581,38.515,68.454)
N9: (-65.235,38.631,70.257)
O5': (-61.086,37.490,68.446)
O3': (-62.432,35.756,72.490)
OP1: (-66.832,31.470,59.959)
OP2: (-67.115,33.299,61.689)
C3': (-71.234,33.952,59.962)
C1': (-70.597,35.561,61.589)
C5': (-70.231,32.221,61.596)
O4': (-71.054,34.399,62.283)
C8: (-68.211,36.432,61.846)
O2': (-70.338,36.125,59.219)
C6: (-67.661,36.999,65.241)
C5: (-68.046,36.723,63.922)
C4: (-69.335,36.270,63.700)
P: (-67.612,32.060,61.072)
C4': (-71.271,33.308,61.345)
C2': (-70.239,35.086,60.168)
C2: (-69.807,36.361,65.840)
N1: (-68.590,36.806,66.204)
N3: (-70.277,36.069,64.630)
N6: (-66.441,37.446,65.565)
N7: (-67.341,36.829,62.743)
N9: (-69.448,36.094,62.340)
O5': (-69.157,32.254,60.638)
O3': (-72.518,34.522,59.640)
OP2: (-67.115,33.299,61.689)
C3': (-71.234,33.952,59.962)
C1': (-70.597,35.561,61.589)
C5': (-70.231,32.221,61.596)
O4': (-71.054,34.399,62.283)
C8: (-68.211,36.432,61.846)
O2': (-70.338,36.125,59.219)
C6: (-67.661,36.999,65.241)
C5: (-68.046,36.723,63.922)
C4: (-69.335,36.270,63.700)
P: (-67.612,32.060,61.072)
C4': (-71.271,33.308,61.345)
C2': (-70.239,35.086,60.168)
C2: (-69.807,36.361,65.840)
N1: (-68.590,36.806,66.204)
N3: (-70.277,36.069,64.630)
N6: (-66.441,37.446,65.565)
N7: (-67.341,36.829,62.743)
N9: (-69.448,36.094,62.340)
O5': (-69.157,32.254,60.638)
O3': (-72.518,34.522,59.640)
Image (generated by PyMOL):