Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0871:0872
Extra
PDB:
ATOM 1 O3' U A 870 75.878 132.914 74.586 1.00 32.12 O
ATOM 2 P C A 871 76.875 133.072 75.837 1.00 32.93 P
ATOM 3 OP1 C A 871 76.158 132.768 77.099 1.00 28.03 O
ATOM 4 OP2 C A 871 77.577 134.370 75.687 1.00 33.38 O
ATOM 5 O5' C A 871 77.932 131.906 75.612 1.00 31.17 O
ATOM 6 C5' C A 871 77.511 130.548 75.462 1.00 27.50 C
ATOM 7 C4' C A 871 78.641 129.716 74.919 1.00 27.74 C
ATOM 8 O4' C A 871 78.871 130.072 73.531 1.00 26.77 O
ATOM 9 C3' C A 871 79.979 129.886 75.632 1.00 28.66 C
ATOM 10 O3' C A 871 80.692 128.655 75.633 1.00 29.32 O
ATOM 11 C2' C A 871 80.695 130.894 74.747 1.00 29.46 C
ATOM 12 O2' C A 871 82.095 130.781 74.837 1.00 33.12 O
ATOM 13 C1' C A 871 80.216 130.466 73.363 1.00 28.76 C
ATOM 14 N1 C A 871 80.278 131.505 72.314 1.00 30.11 N
ATOM 15 C2 C A 871 81.023 131.244 71.157 1.00 31.00 C
ATOM 16 O2 C A 871 81.644 130.173 71.068 1.00 35.09 O
ATOM 17 N3 C A 871 81.058 132.165 70.168 1.00 28.29 N
ATOM 18 C4 C A 871 80.409 133.314 70.306 1.00 27.52 C
ATOM 19 N4 C A 871 80.480 134.186 69.304 1.00 27.33 N
ATOM 20 C5 C A 871 79.660 133.620 71.479 1.00 28.87 C
ATOM 21 C6 C A 871 79.619 132.697 72.449 1.00 29.44 C
ATOM 22 P G A 872 80.962 127.891 77.021 1.00 30.73 P
ATOM 23 OP1 G A 872 79.656 127.392 77.524 1.00 30.49 O
ATOM 24 OP2 G A 872 81.777 128.779 77.872 1.00 30.25 O
ATOM 25 O5' G A 872 81.852 126.636 76.619 1.00 30.11 O
TER
ATOM 1 O3' C B 871 80.692 128.655 75.633 1.00 29.32 O
ATOM 2 P G B 872 80.962 127.891 77.021 1.00 30.73 P
ATOM 3 OP1 G B 872 79.656 127.392 77.524 1.00 30.49 O
ATOM 4 OP2 G B 872 81.777 128.779 77.872 1.00 30.25 O
ATOM 5 O5' G B 872 81.852 126.636 76.619 1.00 30.11 O
ATOM 6 C5' G B 872 82.375 126.493 75.289 1.00 31.83 C
ATOM 7 C4' G B 872 82.515 125.036 74.947 1.00 33.97 C
ATOM 8 O4' G B 872 83.563 124.438 75.757 1.00 34.51 O
ATOM 9 C3' G B 872 81.264 124.218 75.209 1.00 34.97 C
ATOM 10 O3' G B 872 81.185 123.174 74.270 1.00 36.11 O
ATOM 11 C2' G B 872 81.523 123.642 76.592 1.00 35.48 C
ATOM 12 O2' G B 872 80.837 122.432 76.814 1.00 38.39 O
ATOM 13 C1' G B 872 83.028 123.396 76.552 1.00 35.09 C
ATOM 14 N9 G B 872 83.603 123.506 77.887 1.00 34.55 N
ATOM 15 C8 G B 872 83.585 124.622 78.683 1.00 35.37 C
ATOM 16 N7 G B 872 84.145 124.435 79.841 1.00 35.48 N
ATOM 17 C5 G B 872 84.566 123.119 79.807 1.00 35.47 C
ATOM 18 C6 G B 872 85.231 122.361 80.786 1.00 37.84 C
ATOM 19 O6 G B 872 85.609 122.719 81.907 1.00 40.79 O
ATOM 20 N1 G B 872 85.460 121.059 80.358 1.00 38.46 N
ATOM 21 C2 G B 872 85.101 120.560 79.137 1.00 38.09 C
ATOM 22 N2 G B 872 85.410 119.272 78.925 1.00 38.19 N
ATOM 23 N3 G B 872 84.484 121.269 78.200 1.00 36.86 N
ATOM 24 C4 G B 872 84.245 122.531 78.605 1.00 34.65 C
ATOM 25 P A B 873 79.978 123.147 73.232 1.00 36.83 P
ATOM 26 OP1 A B 873 78.777 123.687 73.925 1.00 35.20 O
ATOM 27 OP2 A B 873 79.936 121.792 72.643 1.00 38.88 O
ATOM 28 O5' A B 873 80.432 124.162 72.099 1.00 34.44 O
TER
ATOM 2 P C A 871 76.875 133.072 75.837 1.00 32.93 P
ATOM 3 OP1 C A 871 76.158 132.768 77.099 1.00 28.03 O
ATOM 4 OP2 C A 871 77.577 134.370 75.687 1.00 33.38 O
ATOM 5 O5' C A 871 77.932 131.906 75.612 1.00 31.17 O
ATOM 6 C5' C A 871 77.511 130.548 75.462 1.00 27.50 C
ATOM 7 C4' C A 871 78.641 129.716 74.919 1.00 27.74 C
ATOM 8 O4' C A 871 78.871 130.072 73.531 1.00 26.77 O
ATOM 9 C3' C A 871 79.979 129.886 75.632 1.00 28.66 C
ATOM 10 O3' C A 871 80.692 128.655 75.633 1.00 29.32 O
ATOM 11 C2' C A 871 80.695 130.894 74.747 1.00 29.46 C
ATOM 12 O2' C A 871 82.095 130.781 74.837 1.00 33.12 O
ATOM 13 C1' C A 871 80.216 130.466 73.363 1.00 28.76 C
ATOM 14 N1 C A 871 80.278 131.505 72.314 1.00 30.11 N
ATOM 15 C2 C A 871 81.023 131.244 71.157 1.00 31.00 C
ATOM 16 O2 C A 871 81.644 130.173 71.068 1.00 35.09 O
ATOM 17 N3 C A 871 81.058 132.165 70.168 1.00 28.29 N
ATOM 18 C4 C A 871 80.409 133.314 70.306 1.00 27.52 C
ATOM 19 N4 C A 871 80.480 134.186 69.304 1.00 27.33 N
ATOM 20 C5 C A 871 79.660 133.620 71.479 1.00 28.87 C
ATOM 21 C6 C A 871 79.619 132.697 72.449 1.00 29.44 C
ATOM 22 P G A 872 80.962 127.891 77.021 1.00 30.73 P
ATOM 23 OP1 G A 872 79.656 127.392 77.524 1.00 30.49 O
ATOM 24 OP2 G A 872 81.777 128.779 77.872 1.00 30.25 O
ATOM 25 O5' G A 872 81.852 126.636 76.619 1.00 30.11 O
TER
ATOM 1 O3' C B 871 80.692 128.655 75.633 1.00 29.32 O
ATOM 2 P G B 872 80.962 127.891 77.021 1.00 30.73 P
ATOM 3 OP1 G B 872 79.656 127.392 77.524 1.00 30.49 O
ATOM 4 OP2 G B 872 81.777 128.779 77.872 1.00 30.25 O
ATOM 5 O5' G B 872 81.852 126.636 76.619 1.00 30.11 O
ATOM 6 C5' G B 872 82.375 126.493 75.289 1.00 31.83 C
ATOM 7 C4' G B 872 82.515 125.036 74.947 1.00 33.97 C
ATOM 8 O4' G B 872 83.563 124.438 75.757 1.00 34.51 O
ATOM 9 C3' G B 872 81.264 124.218 75.209 1.00 34.97 C
ATOM 10 O3' G B 872 81.185 123.174 74.270 1.00 36.11 O
ATOM 11 C2' G B 872 81.523 123.642 76.592 1.00 35.48 C
ATOM 12 O2' G B 872 80.837 122.432 76.814 1.00 38.39 O
ATOM 13 C1' G B 872 83.028 123.396 76.552 1.00 35.09 C
ATOM 14 N9 G B 872 83.603 123.506 77.887 1.00 34.55 N
ATOM 15 C8 G B 872 83.585 124.622 78.683 1.00 35.37 C
ATOM 16 N7 G B 872 84.145 124.435 79.841 1.00 35.48 N
ATOM 17 C5 G B 872 84.566 123.119 79.807 1.00 35.47 C
ATOM 18 C6 G B 872 85.231 122.361 80.786 1.00 37.84 C
ATOM 19 O6 G B 872 85.609 122.719 81.907 1.00 40.79 O
ATOM 20 N1 G B 872 85.460 121.059 80.358 1.00 38.46 N
ATOM 21 C2 G B 872 85.101 120.560 79.137 1.00 38.09 C
ATOM 22 N2 G B 872 85.410 119.272 78.925 1.00 38.19 N
ATOM 23 N3 G B 872 84.484 121.269 78.200 1.00 36.86 N
ATOM 24 C4 G B 872 84.245 122.531 78.605 1.00 34.65 C
ATOM 25 P A B 873 79.978 123.147 73.232 1.00 36.83 P
ATOM 26 OP1 A B 873 78.777 123.687 73.925 1.00 35.20 O
ATOM 27 OP2 A B 873 79.936 121.792 72.643 1.00 38.88 O
ATOM 28 O5' A B 873 80.432 124.162 72.099 1.00 34.44 O
TER
Atoms:
C2: (81.023,131.244,71.157)
OP1: (76.158,132.768,77.099)
OP2: (77.577,134.370,75.687)
C4: (80.409,133.314,70.306)
O5': (77.932,131.906,75.612)
C3': (79.979,129.886,75.632)
C1': (80.216,130.466,73.363)
O4': (78.871,130.072,73.531)
C5': (77.511,130.548,75.462)
P: (76.875,133.072,75.837)
O2: (81.644,130.173,71.068)
C4': (78.641,129.716,74.919)
C2': (80.695,130.894,74.747)
O2': (82.095,130.781,74.837)
N1: (80.278,131.505,72.314)
N3: (81.058,132.165,70.168)
N4: (80.480,134.186,69.304)
C6: (79.619,132.697,72.449)
C5: (79.660,133.620,71.479)
O3': (80.692,128.655,75.633)
OP1: (76.158,132.768,77.099)
OP2: (77.577,134.370,75.687)
C4: (80.409,133.314,70.306)
O5': (77.932,131.906,75.612)
C3': (79.979,129.886,75.632)
C1': (80.216,130.466,73.363)
O4': (78.871,130.072,73.531)
C5': (77.511,130.548,75.462)
P: (76.875,133.072,75.837)
O2: (81.644,130.173,71.068)
C4': (78.641,129.716,74.919)
C2': (80.695,130.894,74.747)
O2': (82.095,130.781,74.837)
N1: (80.278,131.505,72.314)
N3: (81.058,132.165,70.168)
N4: (80.480,134.186,69.304)
C6: (79.619,132.697,72.449)
C5: (79.660,133.620,71.479)
O3': (80.692,128.655,75.633)
OP1: (79.656,127.392,77.524)
OP2: (81.777,128.779,77.872)
C3': (81.264,124.218,75.209)
C1': (83.028,123.396,76.552)
C5': (82.375,126.493,75.289)
O6: (85.609,122.719,81.907)
O4': (83.563,124.438,75.757)
C8: (83.585,124.622,78.683)
C2: (85.101,120.560,79.137)
C6: (85.231,122.361,80.786)
C5: (84.566,123.119,79.807)
C4: (84.245,122.531,78.605)
P: (80.962,127.891,77.021)
C4': (82.515,125.036,74.947)
C2': (81.523,123.642,76.592)
O2': (80.837,122.432,76.814)
N1: (85.460,121.059,80.358)
N2: (85.410,119.272,78.925)
N3: (84.484,121.269,78.200)
N7: (84.145,124.435,79.841)
N9: (83.603,123.506,77.887)
O5': (81.852,126.636,76.619)
O3': (81.185,123.174,74.270)
OP2: (81.777,128.779,77.872)
C3': (81.264,124.218,75.209)
C1': (83.028,123.396,76.552)
C5': (82.375,126.493,75.289)
O6: (85.609,122.719,81.907)
O4': (83.563,124.438,75.757)
C8: (83.585,124.622,78.683)
C2: (85.101,120.560,79.137)
C6: (85.231,122.361,80.786)
C5: (84.566,123.119,79.807)
C4: (84.245,122.531,78.605)
P: (80.962,127.891,77.021)
C4': (82.515,125.036,74.947)
C2': (81.523,123.642,76.592)
O2': (80.837,122.432,76.814)
N1: (85.460,121.059,80.358)
N2: (85.410,119.272,78.925)
N3: (84.484,121.269,78.200)
N7: (84.145,124.435,79.841)
N9: (83.603,123.506,77.887)
O5': (81.852,126.636,76.619)
O3': (81.185,123.174,74.270)
Image (generated by PyMOL):