ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:S40:S41

Extra

PDB:
ATOM 1 O3' U A 39 7.991 19.316 100.369 1.00 52.13 O
ATOM 2 P U A 40 8.372 20.716 99.717 1.00 52.31 P
ATOM 3 OP1 U A 40 8.188 21.746 100.754 1.00 52.38 O
ATOM 4 OP2 U A 40 7.647 20.828 98.436 1.00 52.37 O
ATOM 5 O5' U A 40 9.940 20.608 99.418 1.00 53.33 O
ATOM 6 C5' U A 40 10.633 21.767 98.948 1.00 54.92 C
ATOM 7 C4' U A 40 12.031 21.902 99.531 1.00 55.62 C
ATOM 8 O4' U A 40 12.001 22.601 100.806 1.00 57.47 O
ATOM 9 C3' U A 40 12.755 20.590 99.814 1.00 56.12 C
ATOM 10 O3' U A 40 14.170 20.705 99.534 1.00 54.28 O
ATOM 11 C2' U A 40 12.423 20.386 101.293 1.00 56.71 C
ATOM 12 O2' U A 40 13.280 19.463 101.926 1.00 56.51 O
ATOM 13 C1' U A 40 12.564 21.813 101.844 1.00 58.74 C
ATOM 14 N1 U A 40 11.800 22.170 103.110 1.00 60.04 N
ATOM 15 C2 U A 40 11.431 21.197 104.042 1.00 61.09 C
ATOM 16 O2 U A 40 11.695 20.005 103.954 1.00 60.80 O
ATOM 17 N3 U A 40 10.719 21.675 105.126 1.00 61.20 N
ATOM 18 C4 U A 40 10.335 22.986 105.383 1.00 60.70 C
ATOM 19 O4 U A 40 9.690 23.237 106.404 1.00 60.56 O
ATOM 20 C5 U A 40 10.743 23.942 104.378 1.00 60.57 C
ATOM 21 C6 U A 40 11.440 23.504 103.312 1.00 60.86 C
ATOM 22 P A A 41 14.723 20.845 98.025 1.00 53.05 P
ATOM 23 OP1 A A 41 15.940 21.687 98.112 1.00 51.33 O
ATOM 24 OP2 A A 41 13.611 21.174 97.096 1.00 52.52 O
ATOM 25 O5' A A 41 15.093 19.352 97.615 1.00 49.47 O
TER

ATOM 1 O3' U B 40 14.170 20.705 99.534 1.00 54.28 O
ATOM 2 P A B 41 14.723 20.845 98.025 1.00 53.05 P
ATOM 3 OP1 A B 41 15.940 21.687 98.112 1.00 51.33 O
ATOM 4 OP2 A B 41 13.611 21.174 97.096 1.00 52.52 O
ATOM 5 O5' A B 41 15.093 19.352 97.615 1.00 49.47 O
ATOM 6 C5' A B 41 15.989 18.582 98.372 1.00 46.81 C
ATOM 7 C4' A B 41 16.926 17.900 97.407 1.00 45.23 C
ATOM 8 O4' A B 41 16.137 17.288 96.354 1.00 44.08 O
ATOM 9 C3' A B 41 17.895 18.844 96.713 1.00 43.73 C
ATOM 10 O3' A B 41 19.132 18.198 96.620 1.00 43.02 O
ATOM 11 C2' A B 41 17.261 19.057 95.341 1.00 43.99 C
ATOM 12 O2' A B 41 18.196 19.383 94.328 1.00 42.96 O
ATOM 13 C1' A B 41 16.645 17.681 95.101 1.00 42.85 C
ATOM 14 N9 A B 41 15.573 17.638 94.110 1.00 42.31 N
ATOM 15 C8 A B 41 14.247 17.969 94.250 1.00 42.23 C
ATOM 16 N7 A B 41 13.533 17.814 93.154 1.00 41.58 N
ATOM 17 C5 A B 41 14.458 17.351 92.229 1.00 41.92 C
ATOM 18 C6 A B 41 14.371 16.985 90.867 1.00 41.97 C
ATOM 19 N6 A B 41 13.251 17.022 90.149 1.00 41.81 N
ATOM 20 N1 A B 41 15.496 16.560 90.249 1.00 42.27 N
ATOM 21 C2 A B 41 16.641 16.511 90.943 1.00 42.04 C
ATOM 22 N3 A B 41 16.853 16.821 92.217 1.00 41.94 N
ATOM 23 C4 A B 41 15.717 17.239 92.805 1.00 42.36 C
ATOM 24 P U B 42 20.303 18.567 97.629 1.00 43.11 P
ATOM 25 OP1 U B 42 19.820 18.393 99.018 1.00 41.93 O
ATOM 26 OP2 U B 42 20.880 19.840 97.157 1.00 41.02 O
ATOM 27 O5' U B 42 21.368 17.415 97.352 1.00 43.03 O
TER

Atoms:
C4: (10.335,22.986,105.383)
N3: (10.719,21.675,105.126)
OP1: (8.188,21.746,100.754)
OP2: (7.647,20.828,98.436)
C2: (11.431,21.197,104.042)
C1': (12.564,21.813,101.844)
C3': (12.755,20.590,99.814)
O5': (9.940,20.608,99.418)
O4': (12.001,22.601,100.806)
C5': (10.633,21.767,98.948)
P: (8.372,20.716,99.717)
C4': (12.031,21.902,99.531)
C2': (12.423,20.386,101.293)
O2': (13.280,19.463,101.926)
N1: (11.800,22.170,103.110)
O4: (9.690,23.237,106.404)
O2: (11.695,20.005,103.954)
C6: (11.440,23.504,103.312)
C5: (10.743,23.942,104.378)
O3': (14.170,20.705,99.534)
OP1: (15.940,21.687,98.112)
OP2: (13.611,21.174,97.096)
C3': (17.895,18.844,96.713)
C1': (16.645,17.681,95.101)
C5': (15.989,18.582,98.372)
O4': (16.137,17.288,96.354)
C8: (14.247,17.969,94.250)
O2': (18.196,19.383,94.328)
C6: (14.371,16.985,90.867)
C5: (14.458,17.351,92.229)
C4: (15.717,17.239,92.805)
P: (14.723,20.845,98.025)
C4': (16.926,17.900,97.407)
C2': (17.261,19.057,95.341)
C2: (16.641,16.511,90.943)
N1: (15.496,16.560,90.249)
N3: (16.853,16.821,92.217)
N6: (13.251,17.022,90.149)
N7: (13.533,17.814,93.154)
N9: (15.573,17.638,94.110)
O5': (15.093,19.352,97.615)
O3': (19.132,18.198,96.620)
Image (generated by PyMOL):
PyMOL image
show in jmol