Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D51:D18
Extra
PDB:
ATOM 1 O3' A A 50 12.600 -9.881 -53.076 1.00 47.09 O
ATOM 2 P A A 51 14.197 -10.023 -53.082 1.00 39.44 P
ATOM 3 OP1 A A 51 14.519 -11.344 -52.495 1.00 44.66 O
ATOM 4 OP2 A A 51 14.747 -8.804 -52.439 1.00 48.91 O
ATOM 5 O5' A A 51 14.544 -10.020 -54.636 1.00 41.44 O
ATOM 6 C5' A A 51 13.844 -9.176 -55.539 1.00 40.34 C
ATOM 7 C4' A A 51 13.172 -9.971 -56.630 1.00 41.32 C
ATOM 8 O4' A A 51 11.733 -9.981 -56.423 1.00 43.69 O
ATOM 9 C3' A A 51 13.320 -9.428 -58.041 1.00 40.21 C
ATOM 10 O3' A A 51 14.574 -9.713 -58.627 1.00 41.45 O
ATOM 11 C2' A A 51 12.145 -10.074 -58.756 1.00 42.05 C
ATOM 12 O2' A A 51 12.405 -11.447 -59.012 1.00 45.10 O
ATOM 13 C1' A A 51 11.072 -9.980 -57.675 1.00 39.60 C
ATOM 14 N9 A A 51 10.296 -8.733 -57.797 1.00 34.52 N
ATOM 15 C8 A A 51 10.475 -7.547 -57.131 1.00 35.53 C
ATOM 16 N7 A A 51 9.621 -6.616 -57.481 1.00 38.35 N
ATOM 17 C5 A A 51 8.833 -7.229 -58.447 1.00 37.46 C
ATOM 18 C6 A A 51 7.743 -6.776 -59.214 1.00 33.27 C
ATOM 19 N6 A A 51 7.234 -5.545 -59.128 1.00 33.38 N
ATOM 20 N1 A A 51 7.185 -7.642 -60.087 1.00 31.62 N
ATOM 21 C2 A A 51 7.694 -8.877 -60.177 1.00 32.17 C
ATOM 22 N3 A A 51 8.711 -9.421 -59.514 1.00 34.62 N
ATOM 23 C4 A A 51 9.242 -8.534 -58.654 1.00 37.40 C
ATOM 24 P U A 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 25 OP1 U A 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 26 OP2 U A 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 27 O5' U A 52 13.807 -8.176 -60.439 1.00 34.64 O
TER
ATOM 1 O3' G B 17 11.983 4.316 -51.541 1.00 51.81 O
ATOM 2 P A B 18 10.544 3.760 -51.086 1.00 58.87 P
ATOM 3 OP1 A B 18 9.831 4.880 -50.425 1.00 66.50 O
ATOM 4 OP2 A B 18 10.781 2.515 -50.318 1.00 60.78 O
ATOM 5 O5' A B 18 9.844 3.416 -52.475 1.00 55.57 O
ATOM 6 C5' A B 18 9.714 4.404 -53.485 1.00 52.31 C
ATOM 7 C4' A B 18 8.921 3.898 -54.663 1.00 51.45 C
ATOM 8 O4' A B 18 9.738 3.015 -55.472 1.00 55.76 O
ATOM 9 C3' A B 18 7.700 3.058 -54.339 1.00 52.31 C
ATOM 10 O3' A B 18 6.587 3.834 -53.932 1.00 51.02 O
ATOM 11 C2' A B 18 7.474 2.298 -55.640 1.00 54.82 C
ATOM 12 O2' A B 18 6.823 3.122 -56.595 1.00 53.29 O
ATOM 13 C1' A B 18 8.911 2.060 -56.109 1.00 52.07 C
ATOM 14 N9 A B 18 9.388 0.706 -55.772 1.00 46.53 N
ATOM 15 C8 A B 18 10.270 0.307 -54.800 1.00 51.19 C
ATOM 16 N7 A B 18 10.473 -0.991 -54.780 1.00 56.05 N
ATOM 17 C5 A B 18 9.673 -1.476 -55.807 1.00 49.77 C
ATOM 18 C6 A B 18 9.434 -2.771 -56.307 1.00 44.36 C
ATOM 19 N6 A B 18 10.000 -3.879 -55.826 1.00 38.24 N
ATOM 20 N1 A B 18 8.576 -2.893 -57.343 1.00 39.68 N
ATOM 21 C2 A B 18 7.998 -1.794 -57.839 1.00 42.16 C
ATOM 22 N3 A B 18 8.143 -0.530 -57.455 1.00 47.30 N
ATOM 23 C4 A B 18 9.003 -0.439 -56.426 1.00 45.90 C
ATOM 24 P U B 19 5.497 3.218 -52.924 1.00 49.63 P
ATOM 25 OP1 U B 19 4.493 4.279 -52.664 1.00 52.10 O
ATOM 26 OP2 U B 19 6.238 2.643 -51.776 1.00 51.72 O
ATOM 27 O5' U B 19 4.843 2.050 -53.784 1.00 50.20 O
TER
ATOM 2 P A A 51 14.197 -10.023 -53.082 1.00 39.44 P
ATOM 3 OP1 A A 51 14.519 -11.344 -52.495 1.00 44.66 O
ATOM 4 OP2 A A 51 14.747 -8.804 -52.439 1.00 48.91 O
ATOM 5 O5' A A 51 14.544 -10.020 -54.636 1.00 41.44 O
ATOM 6 C5' A A 51 13.844 -9.176 -55.539 1.00 40.34 C
ATOM 7 C4' A A 51 13.172 -9.971 -56.630 1.00 41.32 C
ATOM 8 O4' A A 51 11.733 -9.981 -56.423 1.00 43.69 O
ATOM 9 C3' A A 51 13.320 -9.428 -58.041 1.00 40.21 C
ATOM 10 O3' A A 51 14.574 -9.713 -58.627 1.00 41.45 O
ATOM 11 C2' A A 51 12.145 -10.074 -58.756 1.00 42.05 C
ATOM 12 O2' A A 51 12.405 -11.447 -59.012 1.00 45.10 O
ATOM 13 C1' A A 51 11.072 -9.980 -57.675 1.00 39.60 C
ATOM 14 N9 A A 51 10.296 -8.733 -57.797 1.00 34.52 N
ATOM 15 C8 A A 51 10.475 -7.547 -57.131 1.00 35.53 C
ATOM 16 N7 A A 51 9.621 -6.616 -57.481 1.00 38.35 N
ATOM 17 C5 A A 51 8.833 -7.229 -58.447 1.00 37.46 C
ATOM 18 C6 A A 51 7.743 -6.776 -59.214 1.00 33.27 C
ATOM 19 N6 A A 51 7.234 -5.545 -59.128 1.00 33.38 N
ATOM 20 N1 A A 51 7.185 -7.642 -60.087 1.00 31.62 N
ATOM 21 C2 A A 51 7.694 -8.877 -60.177 1.00 32.17 C
ATOM 22 N3 A A 51 8.711 -9.421 -59.514 1.00 34.62 N
ATOM 23 C4 A A 51 9.242 -8.534 -58.654 1.00 37.40 C
ATOM 24 P U A 52 15.138 -8.771 -59.798 1.00 42.42 P
ATOM 25 OP1 U A 52 15.821 -9.651 -60.777 1.00 48.85 O
ATOM 26 OP2 U A 52 15.914 -7.686 -59.150 1.00 41.97 O
ATOM 27 O5' U A 52 13.807 -8.176 -60.439 1.00 34.64 O
TER
ATOM 1 O3' G B 17 11.983 4.316 -51.541 1.00 51.81 O
ATOM 2 P A B 18 10.544 3.760 -51.086 1.00 58.87 P
ATOM 3 OP1 A B 18 9.831 4.880 -50.425 1.00 66.50 O
ATOM 4 OP2 A B 18 10.781 2.515 -50.318 1.00 60.78 O
ATOM 5 O5' A B 18 9.844 3.416 -52.475 1.00 55.57 O
ATOM 6 C5' A B 18 9.714 4.404 -53.485 1.00 52.31 C
ATOM 7 C4' A B 18 8.921 3.898 -54.663 1.00 51.45 C
ATOM 8 O4' A B 18 9.738 3.015 -55.472 1.00 55.76 O
ATOM 9 C3' A B 18 7.700 3.058 -54.339 1.00 52.31 C
ATOM 10 O3' A B 18 6.587 3.834 -53.932 1.00 51.02 O
ATOM 11 C2' A B 18 7.474 2.298 -55.640 1.00 54.82 C
ATOM 12 O2' A B 18 6.823 3.122 -56.595 1.00 53.29 O
ATOM 13 C1' A B 18 8.911 2.060 -56.109 1.00 52.07 C
ATOM 14 N9 A B 18 9.388 0.706 -55.772 1.00 46.53 N
ATOM 15 C8 A B 18 10.270 0.307 -54.800 1.00 51.19 C
ATOM 16 N7 A B 18 10.473 -0.991 -54.780 1.00 56.05 N
ATOM 17 C5 A B 18 9.673 -1.476 -55.807 1.00 49.77 C
ATOM 18 C6 A B 18 9.434 -2.771 -56.307 1.00 44.36 C
ATOM 19 N6 A B 18 10.000 -3.879 -55.826 1.00 38.24 N
ATOM 20 N1 A B 18 8.576 -2.893 -57.343 1.00 39.68 N
ATOM 21 C2 A B 18 7.998 -1.794 -57.839 1.00 42.16 C
ATOM 22 N3 A B 18 8.143 -0.530 -57.455 1.00 47.30 N
ATOM 23 C4 A B 18 9.003 -0.439 -56.426 1.00 45.90 C
ATOM 24 P U B 19 5.497 3.218 -52.924 1.00 49.63 P
ATOM 25 OP1 U B 19 4.493 4.279 -52.664 1.00 52.10 O
ATOM 26 OP2 U B 19 6.238 2.643 -51.776 1.00 51.72 O
ATOM 27 O5' U B 19 4.843 2.050 -53.784 1.00 50.20 O
TER
Atoms:
OP1: (14.519,-11.344,-52.495)
OP2: (14.747,-8.804,-52.439)
C3': (13.320,-9.428,-58.041)
C1': (11.072,-9.980,-57.675)
C5': (13.844,-9.176,-55.539)
O4': (11.733,-9.981,-56.423)
C8: (10.475,-7.547,-57.131)
O2': (12.405,-11.447,-59.012)
C6: (7.743,-6.776,-59.214)
C5: (8.833,-7.229,-58.447)
C4: (9.242,-8.534,-58.654)
P: (14.197,-10.023,-53.082)
C4': (13.172,-9.971,-56.630)
C2': (12.145,-10.074,-58.756)
C2: (7.694,-8.877,-60.177)
N1: (7.185,-7.642,-60.087)
N3: (8.711,-9.421,-59.514)
N6: (7.234,-5.545,-59.128)
N7: (9.621,-6.616,-57.481)
N9: (10.296,-8.733,-57.797)
O5': (14.544,-10.020,-54.636)
O3': (14.574,-9.713,-58.627)
OP2: (14.747,-8.804,-52.439)
C3': (13.320,-9.428,-58.041)
C1': (11.072,-9.980,-57.675)
C5': (13.844,-9.176,-55.539)
O4': (11.733,-9.981,-56.423)
C8: (10.475,-7.547,-57.131)
O2': (12.405,-11.447,-59.012)
C6: (7.743,-6.776,-59.214)
C5: (8.833,-7.229,-58.447)
C4: (9.242,-8.534,-58.654)
P: (14.197,-10.023,-53.082)
C4': (13.172,-9.971,-56.630)
C2': (12.145,-10.074,-58.756)
C2: (7.694,-8.877,-60.177)
N1: (7.185,-7.642,-60.087)
N3: (8.711,-9.421,-59.514)
N6: (7.234,-5.545,-59.128)
N7: (9.621,-6.616,-57.481)
N9: (10.296,-8.733,-57.797)
O5': (14.544,-10.020,-54.636)
O3': (14.574,-9.713,-58.627)
OP1: (9.831,4.880,-50.425)
OP2: (10.781,2.515,-50.318)
C3': (7.700,3.058,-54.339)
C1': (8.911,2.060,-56.109)
C5': (9.714,4.404,-53.485)
O4': (9.738,3.015,-55.472)
C8: (10.270,0.307,-54.800)
O2': (6.823,3.122,-56.595)
C6: (9.434,-2.771,-56.307)
C5: (9.673,-1.476,-55.807)
C4: (9.003,-0.439,-56.426)
P: (10.544,3.760,-51.086)
C4': (8.921,3.898,-54.663)
C2': (7.474,2.298,-55.640)
C2: (7.998,-1.794,-57.839)
N1: (8.576,-2.893,-57.343)
N3: (8.143,-0.530,-57.455)
N6: (10.000,-3.879,-55.826)
N7: (10.473,-0.991,-54.780)
N9: (9.388,0.706,-55.772)
O5': (9.844,3.416,-52.475)
O3': (6.587,3.834,-53.932)
OP2: (10.781,2.515,-50.318)
C3': (7.700,3.058,-54.339)
C1': (8.911,2.060,-56.109)
C5': (9.714,4.404,-53.485)
O4': (9.738,3.015,-55.472)
C8: (10.270,0.307,-54.800)
O2': (6.823,3.122,-56.595)
C6: (9.434,-2.771,-56.307)
C5: (9.673,-1.476,-55.807)
C4: (9.003,-0.439,-56.426)
P: (10.544,3.760,-51.086)
C4': (8.921,3.898,-54.663)
C2': (7.474,2.298,-55.640)
C2: (7.998,-1.794,-57.839)
N1: (8.576,-2.893,-57.343)
N3: (8.143,-0.530,-57.455)
N6: (10.000,-3.879,-55.826)
N7: (10.473,-0.991,-54.780)
N9: (9.388,0.706,-55.772)
O5': (9.844,3.416,-52.475)
O3': (6.587,3.834,-53.932)
Image (generated by PyMOL):