Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A701:A700
Extra
PDB:
ATOM 1 O3' C A 700 5.747 54.841 55.477 1.00 82.86 O
ATOM 2 P U A 701 4.309 55.189 56.119 1.00 85.45 P
ATOM 3 OP1 U A 701 3.277 54.467 55.327 1.00 84.63 O
ATOM 4 OP2 U A 701 4.244 56.676 56.220 1.00 85.23 O
ATOM 5 O5' U A 701 4.397 54.546 57.587 1.00 87.53 O
ATOM 6 C5' U A 701 3.239 54.480 58.478 1.00 89.97 C
ATOM 7 C4' U A 701 3.350 53.296 59.443 1.00 91.57 C
ATOM 8 O4' U A 701 3.270 52.048 58.703 1.00 91.99 O
ATOM 9 C3' U A 701 4.602 53.173 60.315 1.00 92.65 C
ATOM 10 O3' U A 701 4.229 52.547 61.547 1.00 94.77 O
ATOM 11 C2' U A 701 5.498 52.249 59.493 1.00 91.93 C
ATOM 12 O2' U A 701 6.481 51.544 60.239 1.00 90.00 O
ATOM 13 C1' U A 701 4.460 51.295 58.898 1.00 92.26 C
ATOM 14 N1 U A 701 4.858 50.735 57.596 1.00 93.48 N
ATOM 15 C2 U A 701 4.889 49.347 57.452 1.00 94.11 C
ATOM 16 O2 U A 701 4.626 48.574 58.354 1.00 95.59 O
ATOM 17 N3 U A 701 5.254 48.898 56.207 1.00 93.82 N
ATOM 18 C4 U A 701 5.604 49.672 55.117 1.00 93.67 C
ATOM 19 O4 U A 701 6.007 49.123 54.088 1.00 93.20 O
ATOM 20 C5 U A 701 5.550 51.089 55.347 1.00 93.78 C
ATOM 21 C6 U A 701 5.187 51.558 56.543 1.00 93.51 C
ATOM 22 P U A 702 3.944 53.461 62.838 1.00 97.36 P
ATOM 23 OP1 U A 702 3.401 52.610 63.945 1.00 97.88 O
ATOM 24 OP2 U A 702 3.130 54.597 62.338 1.00 96.74 O
ATOM 25 O5' U A 702 5.381 54.045 63.247 1.00 97.03 O
TER
ATOM 1 O3' G B 699 8.772 59.302 52.950 1.00 71.20 O
ATOM 2 P C B 700 7.323 59.025 53.595 1.00 71.28 P
ATOM 3 OP1 C B 700 6.510 58.548 52.447 1.00 71.49 O
ATOM 4 OP2 C B 700 6.831 60.166 54.414 1.00 70.19 O
ATOM 5 O5' C B 700 7.603 57.783 54.544 1.00 72.67 O
ATOM 6 C5' C B 700 8.024 56.534 53.971 1.00 76.37 C
ATOM 7 C4' C B 700 8.077 55.466 55.025 1.00 79.12 C
ATOM 8 O4' C B 700 9.250 55.658 55.856 1.00 79.95 O
ATOM 9 C3' C B 700 6.923 55.448 56.013 1.00 80.63 C
ATOM 10 O3' C B 700 5.747 54.841 55.477 1.00 82.86 O
ATOM 11 C2' C B 700 7.530 54.671 57.173 1.00 80.36 C
ATOM 12 O2' C B 700 7.553 53.281 56.901 1.00 79.40 O
ATOM 13 C1' C B 700 8.966 55.223 57.180 1.00 80.22 C
ATOM 14 N1 C B 700 9.181 56.355 58.121 1.00 80.53 N
ATOM 15 C2 C B 700 9.775 56.093 59.365 1.00 80.66 C
ATOM 16 O2 C B 700 10.174 54.948 59.614 1.00 81.82 O
ATOM 17 N3 C B 700 9.910 57.095 60.262 1.00 81.19 N
ATOM 18 C4 C B 700 9.500 58.329 59.954 1.00 81.78 C
ATOM 19 N4 C B 700 9.628 59.285 60.887 1.00 81.75 N
ATOM 20 C5 C B 700 8.935 58.640 58.681 1.00 81.28 C
ATOM 21 C6 C B 700 8.794 57.631 57.803 1.00 80.75 C
ATOM 22 P U B 701 4.309 55.189 56.119 1.00 85.45 P
ATOM 23 OP1 U B 701 3.277 54.467 55.327 1.00 84.63 O
ATOM 24 OP2 U B 701 4.244 56.676 56.220 1.00 85.23 O
ATOM 25 O5' U B 701 4.397 54.546 57.587 1.00 87.53 O
TER
ATOM 2 P U A 701 4.309 55.189 56.119 1.00 85.45 P
ATOM 3 OP1 U A 701 3.277 54.467 55.327 1.00 84.63 O
ATOM 4 OP2 U A 701 4.244 56.676 56.220 1.00 85.23 O
ATOM 5 O5' U A 701 4.397 54.546 57.587 1.00 87.53 O
ATOM 6 C5' U A 701 3.239 54.480 58.478 1.00 89.97 C
ATOM 7 C4' U A 701 3.350 53.296 59.443 1.00 91.57 C
ATOM 8 O4' U A 701 3.270 52.048 58.703 1.00 91.99 O
ATOM 9 C3' U A 701 4.602 53.173 60.315 1.00 92.65 C
ATOM 10 O3' U A 701 4.229 52.547 61.547 1.00 94.77 O
ATOM 11 C2' U A 701 5.498 52.249 59.493 1.00 91.93 C
ATOM 12 O2' U A 701 6.481 51.544 60.239 1.00 90.00 O
ATOM 13 C1' U A 701 4.460 51.295 58.898 1.00 92.26 C
ATOM 14 N1 U A 701 4.858 50.735 57.596 1.00 93.48 N
ATOM 15 C2 U A 701 4.889 49.347 57.452 1.00 94.11 C
ATOM 16 O2 U A 701 4.626 48.574 58.354 1.00 95.59 O
ATOM 17 N3 U A 701 5.254 48.898 56.207 1.00 93.82 N
ATOM 18 C4 U A 701 5.604 49.672 55.117 1.00 93.67 C
ATOM 19 O4 U A 701 6.007 49.123 54.088 1.00 93.20 O
ATOM 20 C5 U A 701 5.550 51.089 55.347 1.00 93.78 C
ATOM 21 C6 U A 701 5.187 51.558 56.543 1.00 93.51 C
ATOM 22 P U A 702 3.944 53.461 62.838 1.00 97.36 P
ATOM 23 OP1 U A 702 3.401 52.610 63.945 1.00 97.88 O
ATOM 24 OP2 U A 702 3.130 54.597 62.338 1.00 96.74 O
ATOM 25 O5' U A 702 5.381 54.045 63.247 1.00 97.03 O
TER
ATOM 1 O3' G B 699 8.772 59.302 52.950 1.00 71.20 O
ATOM 2 P C B 700 7.323 59.025 53.595 1.00 71.28 P
ATOM 3 OP1 C B 700 6.510 58.548 52.447 1.00 71.49 O
ATOM 4 OP2 C B 700 6.831 60.166 54.414 1.00 70.19 O
ATOM 5 O5' C B 700 7.603 57.783 54.544 1.00 72.67 O
ATOM 6 C5' C B 700 8.024 56.534 53.971 1.00 76.37 C
ATOM 7 C4' C B 700 8.077 55.466 55.025 1.00 79.12 C
ATOM 8 O4' C B 700 9.250 55.658 55.856 1.00 79.95 O
ATOM 9 C3' C B 700 6.923 55.448 56.013 1.00 80.63 C
ATOM 10 O3' C B 700 5.747 54.841 55.477 1.00 82.86 O
ATOM 11 C2' C B 700 7.530 54.671 57.173 1.00 80.36 C
ATOM 12 O2' C B 700 7.553 53.281 56.901 1.00 79.40 O
ATOM 13 C1' C B 700 8.966 55.223 57.180 1.00 80.22 C
ATOM 14 N1 C B 700 9.181 56.355 58.121 1.00 80.53 N
ATOM 15 C2 C B 700 9.775 56.093 59.365 1.00 80.66 C
ATOM 16 O2 C B 700 10.174 54.948 59.614 1.00 81.82 O
ATOM 17 N3 C B 700 9.910 57.095 60.262 1.00 81.19 N
ATOM 18 C4 C B 700 9.500 58.329 59.954 1.00 81.78 C
ATOM 19 N4 C B 700 9.628 59.285 60.887 1.00 81.75 N
ATOM 20 C5 C B 700 8.935 58.640 58.681 1.00 81.28 C
ATOM 21 C6 C B 700 8.794 57.631 57.803 1.00 80.75 C
ATOM 22 P U B 701 4.309 55.189 56.119 1.00 85.45 P
ATOM 23 OP1 U B 701 3.277 54.467 55.327 1.00 84.63 O
ATOM 24 OP2 U B 701 4.244 56.676 56.220 1.00 85.23 O
ATOM 25 O5' U B 701 4.397 54.546 57.587 1.00 87.53 O
TER
Atoms:
C4: (5.604,49.672,55.117)
N3: (5.254,48.898,56.207)
OP1: (3.277,54.467,55.327)
OP2: (4.244,56.676,56.220)
C2: (4.889,49.347,57.452)
C1': (4.460,51.295,58.898)
C3': (4.602,53.173,60.315)
O5': (4.397,54.546,57.587)
O4': (3.270,52.048,58.703)
C5': (3.239,54.480,58.478)
P: (4.309,55.189,56.119)
C4': (3.350,53.296,59.443)
C2': (5.498,52.249,59.493)
O2': (6.481,51.544,60.239)
N1: (4.858,50.735,57.596)
O4: (6.007,49.123,54.088)
O2: (4.626,48.574,58.354)
C6: (5.187,51.558,56.543)
C5: (5.550,51.089,55.347)
O3': (4.229,52.547,61.547)
N3: (5.254,48.898,56.207)
OP1: (3.277,54.467,55.327)
OP2: (4.244,56.676,56.220)
C2: (4.889,49.347,57.452)
C1': (4.460,51.295,58.898)
C3': (4.602,53.173,60.315)
O5': (4.397,54.546,57.587)
O4': (3.270,52.048,58.703)
C5': (3.239,54.480,58.478)
P: (4.309,55.189,56.119)
C4': (3.350,53.296,59.443)
C2': (5.498,52.249,59.493)
O2': (6.481,51.544,60.239)
N1: (4.858,50.735,57.596)
O4: (6.007,49.123,54.088)
O2: (4.626,48.574,58.354)
C6: (5.187,51.558,56.543)
C5: (5.550,51.089,55.347)
O3': (4.229,52.547,61.547)
C2: (9.775,56.093,59.365)
OP1: (6.510,58.548,52.447)
OP2: (6.831,60.166,54.414)
C4: (9.500,58.329,59.954)
O5': (7.603,57.783,54.544)
C3': (6.923,55.448,56.013)
C1': (8.966,55.223,57.180)
O4': (9.250,55.658,55.856)
C5': (8.024,56.534,53.971)
P: (7.323,59.025,53.595)
O2: (10.174,54.948,59.614)
C4': (8.077,55.466,55.025)
C2': (7.530,54.671,57.173)
O2': (7.553,53.281,56.901)
N1: (9.181,56.355,58.121)
N3: (9.910,57.095,60.262)
N4: (9.628,59.285,60.887)
C6: (8.794,57.631,57.803)
C5: (8.935,58.640,58.681)
O3': (5.747,54.841,55.477)
OP1: (6.510,58.548,52.447)
OP2: (6.831,60.166,54.414)
C4: (9.500,58.329,59.954)
O5': (7.603,57.783,54.544)
C3': (6.923,55.448,56.013)
C1': (8.966,55.223,57.180)
O4': (9.250,55.658,55.856)
C5': (8.024,56.534,53.971)
P: (7.323,59.025,53.595)
O2: (10.174,54.948,59.614)
C4': (8.077,55.466,55.025)
C2': (7.530,54.671,57.173)
O2': (7.553,53.281,56.901)
N1: (9.181,56.355,58.121)
N3: (9.910,57.095,60.262)
N4: (9.628,59.285,60.887)
C6: (8.794,57.631,57.803)
C5: (8.935,58.640,58.681)
O3': (5.747,54.841,55.477)
Image (generated by PyMOL):