Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:B79:B78
Extra
PDB:
ATOM 1 O3' C A 78 117.927 3.217 28.600 1.00166.02 O
ATOM 2 P U A 79 116.789 4.093 29.324 1.00166.82 P
ATOM 3 OP1 U A 79 115.683 3.186 29.725 1.00167.11 O
ATOM 4 OP2 U A 79 116.501 5.261 28.452 1.00165.95 O
ATOM 5 O5' U A 79 117.502 4.625 30.644 1.00163.37 O
ATOM 6 C5' U A 79 118.135 3.721 31.544 1.00158.51 C
ATOM 7 C4' U A 79 119.041 4.473 32.486 1.00155.43 C
ATOM 8 O4' U A 79 120.093 5.122 31.725 1.00154.38 O
ATOM 9 C3' U A 79 118.379 5.609 33.247 1.00155.23 C
ATOM 10 O3' U A 79 117.727 5.116 34.412 1.00156.80 O
ATOM 11 C2' U A 79 119.567 6.498 33.591 1.00154.09 C
ATOM 12 O2' U A 79 120.294 6.025 34.707 1.00152.82 O
ATOM 13 C1' U A 79 120.423 6.361 32.329 1.00153.04 C
ATOM 14 N1 U A 79 120.206 7.430 31.343 1.00152.05 N
ATOM 15 C2 U A 79 120.761 8.668 31.604 1.00151.56 C
ATOM 16 O2 U A 79 121.406 8.904 32.610 1.00150.91 O
ATOM 17 N3 U A 79 120.534 9.620 30.641 1.00151.75 N
ATOM 18 C4 U A 79 119.822 9.464 29.469 1.00151.69 C
ATOM 19 O4 U A 79 119.706 10.419 28.699 1.00151.61 O
ATOM 20 C5 U A 79 119.276 8.156 29.274 1.00151.78 C
ATOM 21 C6 U A 79 119.481 7.208 30.195 1.00151.93 C
ATOM 22 P U A 80 116.527 5.960 35.069 1.00156.64 P
ATOM 23 OP1 U A 80 115.567 5.013 35.690 1.00157.81 O
ATOM 24 OP2 U A 80 116.048 6.927 34.048 1.00156.93 O
ATOM 25 O5' U A 80 117.233 6.787 36.230 1.00153.10 O
TER
ATOM 1 O3' A B 77 119.848 2.576 22.807 1.00171.11 O
ATOM 2 P C B 78 118.794 3.729 23.200 1.00167.40 P
ATOM 3 OP1 C B 78 117.437 3.262 22.823 1.00168.84 O
ATOM 4 OP2 C B 78 119.307 5.011 22.653 1.00168.33 O
ATOM 5 O5' C B 78 118.867 3.809 24.790 1.00164.88 O
ATOM 6 C5' C B 78 118.880 2.625 25.578 1.00163.09 C
ATOM 7 C4' C B 78 119.597 2.876 26.881 1.00162.90 C
ATOM 8 O4' C B 78 120.885 3.487 26.598 1.00161.39 O
ATOM 9 C3' C B 78 118.928 3.865 27.821 1.00163.67 C
ATOM 10 O3' C B 78 117.927 3.217 28.600 1.00166.02 O
ATOM 11 C2' C B 78 120.102 4.329 28.672 1.00162.12 C
ATOM 12 O2' C B 78 120.458 3.394 29.671 1.00161.01 O
ATOM 13 C1' C B 78 121.215 4.409 27.626 1.00159.76 C
ATOM 14 N1 C B 78 121.339 5.749 27.027 1.00157.33 N
ATOM 15 C2 C B 78 122.065 6.729 27.714 1.00156.36 C
ATOM 16 O2 C B 78 122.589 6.437 28.800 1.00155.44 O
ATOM 17 N3 C B 78 122.177 7.966 27.178 1.00155.77 N
ATOM 18 C4 C B 78 121.599 8.240 26.006 1.00156.00 C
ATOM 19 N4 C B 78 121.735 9.474 25.515 1.00155.85 N
ATOM 20 C5 C B 78 120.856 7.260 25.285 1.00156.17 C
ATOM 21 C6 C B 78 120.753 6.039 25.827 1.00156.55 C
ATOM 22 P U B 79 116.789 4.093 29.324 1.00166.82 P
ATOM 23 OP1 U B 79 115.683 3.186 29.725 1.00167.11 O
ATOM 24 OP2 U B 79 116.501 5.261 28.452 1.00165.95 O
ATOM 25 O5' U B 79 117.502 4.625 30.644 1.00163.37 O
TER
ATOM 2 P U A 79 116.789 4.093 29.324 1.00166.82 P
ATOM 3 OP1 U A 79 115.683 3.186 29.725 1.00167.11 O
ATOM 4 OP2 U A 79 116.501 5.261 28.452 1.00165.95 O
ATOM 5 O5' U A 79 117.502 4.625 30.644 1.00163.37 O
ATOM 6 C5' U A 79 118.135 3.721 31.544 1.00158.51 C
ATOM 7 C4' U A 79 119.041 4.473 32.486 1.00155.43 C
ATOM 8 O4' U A 79 120.093 5.122 31.725 1.00154.38 O
ATOM 9 C3' U A 79 118.379 5.609 33.247 1.00155.23 C
ATOM 10 O3' U A 79 117.727 5.116 34.412 1.00156.80 O
ATOM 11 C2' U A 79 119.567 6.498 33.591 1.00154.09 C
ATOM 12 O2' U A 79 120.294 6.025 34.707 1.00152.82 O
ATOM 13 C1' U A 79 120.423 6.361 32.329 1.00153.04 C
ATOM 14 N1 U A 79 120.206 7.430 31.343 1.00152.05 N
ATOM 15 C2 U A 79 120.761 8.668 31.604 1.00151.56 C
ATOM 16 O2 U A 79 121.406 8.904 32.610 1.00150.91 O
ATOM 17 N3 U A 79 120.534 9.620 30.641 1.00151.75 N
ATOM 18 C4 U A 79 119.822 9.464 29.469 1.00151.69 C
ATOM 19 O4 U A 79 119.706 10.419 28.699 1.00151.61 O
ATOM 20 C5 U A 79 119.276 8.156 29.274 1.00151.78 C
ATOM 21 C6 U A 79 119.481 7.208 30.195 1.00151.93 C
ATOM 22 P U A 80 116.527 5.960 35.069 1.00156.64 P
ATOM 23 OP1 U A 80 115.567 5.013 35.690 1.00157.81 O
ATOM 24 OP2 U A 80 116.048 6.927 34.048 1.00156.93 O
ATOM 25 O5' U A 80 117.233 6.787 36.230 1.00153.10 O
TER
ATOM 1 O3' A B 77 119.848 2.576 22.807 1.00171.11 O
ATOM 2 P C B 78 118.794 3.729 23.200 1.00167.40 P
ATOM 3 OP1 C B 78 117.437 3.262 22.823 1.00168.84 O
ATOM 4 OP2 C B 78 119.307 5.011 22.653 1.00168.33 O
ATOM 5 O5' C B 78 118.867 3.809 24.790 1.00164.88 O
ATOM 6 C5' C B 78 118.880 2.625 25.578 1.00163.09 C
ATOM 7 C4' C B 78 119.597 2.876 26.881 1.00162.90 C
ATOM 8 O4' C B 78 120.885 3.487 26.598 1.00161.39 O
ATOM 9 C3' C B 78 118.928 3.865 27.821 1.00163.67 C
ATOM 10 O3' C B 78 117.927 3.217 28.600 1.00166.02 O
ATOM 11 C2' C B 78 120.102 4.329 28.672 1.00162.12 C
ATOM 12 O2' C B 78 120.458 3.394 29.671 1.00161.01 O
ATOM 13 C1' C B 78 121.215 4.409 27.626 1.00159.76 C
ATOM 14 N1 C B 78 121.339 5.749 27.027 1.00157.33 N
ATOM 15 C2 C B 78 122.065 6.729 27.714 1.00156.36 C
ATOM 16 O2 C B 78 122.589 6.437 28.800 1.00155.44 O
ATOM 17 N3 C B 78 122.177 7.966 27.178 1.00155.77 N
ATOM 18 C4 C B 78 121.599 8.240 26.006 1.00156.00 C
ATOM 19 N4 C B 78 121.735 9.474 25.515 1.00155.85 N
ATOM 20 C5 C B 78 120.856 7.260 25.285 1.00156.17 C
ATOM 21 C6 C B 78 120.753 6.039 25.827 1.00156.55 C
ATOM 22 P U B 79 116.789 4.093 29.324 1.00166.82 P
ATOM 23 OP1 U B 79 115.683 3.186 29.725 1.00167.11 O
ATOM 24 OP2 U B 79 116.501 5.261 28.452 1.00165.95 O
ATOM 25 O5' U B 79 117.502 4.625 30.644 1.00163.37 O
TER
Atoms:
C4: (119.822,9.464,29.469)
N3: (120.534,9.620,30.641)
OP1: (115.683,3.186,29.725)
OP2: (116.501,5.261,28.452)
C2: (120.761,8.668,31.604)
C1': (120.423,6.361,32.329)
C3': (118.379,5.609,33.247)
O5': (117.502,4.625,30.644)
O4': (120.093,5.122,31.725)
C5': (118.135,3.721,31.544)
P: (116.789,4.093,29.324)
C4': (119.041,4.473,32.486)
C2': (119.567,6.498,33.591)
O2': (120.294,6.025,34.707)
N1: (120.206,7.430,31.343)
O4: (119.706,10.419,28.699)
O2: (121.406,8.904,32.610)
C6: (119.481,7.208,30.195)
C5: (119.276,8.156,29.274)
O3': (117.727,5.116,34.412)
N3: (120.534,9.620,30.641)
OP1: (115.683,3.186,29.725)
OP2: (116.501,5.261,28.452)
C2: (120.761,8.668,31.604)
C1': (120.423,6.361,32.329)
C3': (118.379,5.609,33.247)
O5': (117.502,4.625,30.644)
O4': (120.093,5.122,31.725)
C5': (118.135,3.721,31.544)
P: (116.789,4.093,29.324)
C4': (119.041,4.473,32.486)
C2': (119.567,6.498,33.591)
O2': (120.294,6.025,34.707)
N1: (120.206,7.430,31.343)
O4: (119.706,10.419,28.699)
O2: (121.406,8.904,32.610)
C6: (119.481,7.208,30.195)
C5: (119.276,8.156,29.274)
O3': (117.727,5.116,34.412)
C2: (122.065,6.729,27.714)
OP1: (117.437,3.262,22.823)
OP2: (119.307,5.011,22.653)
C4: (121.599,8.240,26.006)
O5': (118.867,3.809,24.790)
C3': (118.928,3.865,27.821)
C1': (121.215,4.409,27.626)
O4': (120.885,3.487,26.598)
C5': (118.880,2.625,25.578)
P: (118.794,3.729,23.200)
O2: (122.589,6.437,28.800)
C4': (119.597,2.876,26.881)
C2': (120.102,4.329,28.672)
O2': (120.458,3.394,29.671)
N1: (121.339,5.749,27.027)
N3: (122.177,7.966,27.178)
N4: (121.735,9.474,25.515)
C6: (120.753,6.039,25.827)
C5: (120.856,7.260,25.285)
O3': (117.927,3.217,28.600)
OP1: (117.437,3.262,22.823)
OP2: (119.307,5.011,22.653)
C4: (121.599,8.240,26.006)
O5': (118.867,3.809,24.790)
C3': (118.928,3.865,27.821)
C1': (121.215,4.409,27.626)
O4': (120.885,3.487,26.598)
C5': (118.880,2.625,25.578)
P: (118.794,3.729,23.200)
O2: (122.589,6.437,28.800)
C4': (119.597,2.876,26.881)
C2': (120.102,4.329,28.672)
O2': (120.458,3.394,29.671)
N1: (121.339,5.749,27.027)
N3: (122.177,7.966,27.178)
N4: (121.735,9.474,25.515)
C6: (120.753,6.039,25.827)
C5: (120.856,7.260,25.285)
O3': (117.927,3.217,28.600)
Image (generated by PyMOL):