ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A448:A443

Extra

PDB:
ATOM 1 O3' A A 447 45.898 138.808 53.494 1.00 36.77 O
ATOM 2 P A A 448 44.472 138.092 53.373 1.00 39.51 P
ATOM 3 OP1 A A 448 43.858 138.124 54.709 1.00 39.15 O
ATOM 4 OP2 A A 448 44.690 136.781 52.696 1.00 38.32 O
ATOM 5 O5' A A 448 43.651 139.070 52.425 1.00 38.99 O
ATOM 6 C5' A A 448 44.075 139.318 51.072 1.00 38.41 C
ATOM 7 C4' A A 448 42.903 139.724 50.227 1.00 37.92 C
ATOM 8 O4' A A 448 41.962 138.626 50.186 1.00 38.08 O
ATOM 9 C3' A A 448 42.114 140.944 50.691 1.00 37.80 C
ATOM 10 O3' A A 448 41.645 141.612 49.538 1.00 37.13 O
ATOM 11 C2' A A 448 40.941 140.326 51.442 1.00 38.86 C
ATOM 12 O2' A A 448 39.780 141.146 51.481 1.00 38.13 O
ATOM 13 C1' A A 448 40.692 139.085 50.594 1.00 39.31 C
ATOM 14 N9 A A 448 40.056 137.992 51.301 1.00 39.71 N
ATOM 15 C8 A A 448 40.440 137.397 52.462 1.00 39.74 C
ATOM 16 N7 A A 448 39.731 136.348 52.770 1.00 41.55 N
ATOM 17 C5 A A 448 38.802 136.266 51.750 1.00 41.38 C
ATOM 18 C6 A A 448 37.791 135.357 51.482 1.00 42.11 C
ATOM 19 N6 A A 448 37.555 134.286 52.235 1.00 43.42 N
ATOM 20 N1 A A 448 37.027 135.574 50.397 1.00 42.99 N
ATOM 21 C2 A A 448 37.289 136.638 49.633 1.00 42.92 C
ATOM 22 N3 A A 448 38.232 137.554 49.772 1.00 41.70 N
ATOM 23 C4 A A 448 38.965 137.300 50.864 1.00 41.09 C
ATOM 24 P C A 449 42.519 142.793 48.913 1.00 37.44 P
ATOM 25 OP1 C A 449 41.851 143.259 47.671 1.00 37.88 O
ATOM 26 OP2 C A 449 43.923 142.312 48.861 1.00 37.38 O
ATOM 27 O5' C A 449 42.405 143.941 50.003 1.00 37.68 O
TER

ATOM 1 O3' U B 442 42.995 131.236 62.546 1.00 25.91 O
ATOM 2 P A B 443 43.863 130.561 61.358 1.00 29.01 P
ATOM 3 OP1 A B 443 44.695 129.519 61.973 1.00 28.05 O
ATOM 4 OP2 A B 443 44.504 131.584 60.517 1.00 28.64 O
ATOM 5 O5' A B 443 42.807 129.856 60.405 1.00 30.09 O
ATOM 6 C5' A B 443 41.923 128.822 60.878 1.00 33.38 C
ATOM 7 C4' A B 443 41.004 128.379 59.764 1.00 33.64 C
ATOM 8 O4' A B 443 40.024 129.400 59.462 1.00 34.35 O
ATOM 9 C3' A B 443 41.722 128.153 58.456 1.00 32.92 C
ATOM 10 O3' A B 443 42.284 126.861 58.441 1.00 30.79 O
ATOM 11 C2' A B 443 40.610 128.299 57.438 1.00 34.56 C
ATOM 12 O2' A B 443 39.883 127.092 57.358 1.00 35.32 O
ATOM 13 C1' A B 443 39.766 129.416 58.068 1.00 36.23 C
ATOM 14 N9 A B 443 40.017 130.780 57.575 1.00 38.60 N
ATOM 15 C8 A B 443 40.571 131.812 58.295 1.00 40.28 C
ATOM 16 N7 A B 443 40.672 132.936 57.629 1.00 41.61 N
ATOM 17 C5 A B 443 40.159 132.631 56.377 1.00 42.06 C
ATOM 18 C6 A B 443 39.997 133.405 55.202 1.00 42.46 C
ATOM 19 N6 A B 443 40.369 134.687 55.094 1.00 41.11 N
ATOM 20 N1 A B 443 39.437 132.804 54.132 1.00 42.72 N
ATOM 21 C2 A B 443 39.080 131.519 54.234 1.00 43.24 C
ATOM 22 N3 A B 443 39.191 130.685 55.271 1.00 41.94 N
ATOM 23 C4 A B 443 39.744 131.307 56.328 1.00 40.93 C
ATOM 24 P G B 444 43.698 126.635 57.757 1.00 30.70 P
ATOM 25 OP1 G B 444 43.940 125.177 57.776 1.00 30.35 O
ATOM 26 OP2 G B 444 44.658 127.529 58.413 1.00 30.66 O
ATOM 27 O5' G B 444 43.467 127.167 56.274 1.00 30.98 O
TER

Atoms:
OP1: (43.858,138.124,54.709)
OP2: (44.690,136.781,52.696)
C3': (42.114,140.944,50.691)
C1': (40.692,139.085,50.594)
C5': (44.075,139.318,51.072)
O4': (41.962,138.626,50.186)
C8: (40.440,137.397,52.462)
O2': (39.780,141.146,51.481)
C6: (37.791,135.357,51.482)
C5: (38.802,136.266,51.750)
C4: (38.965,137.300,50.864)
P: (44.472,138.092,53.373)
C4': (42.903,139.724,50.227)
C2': (40.941,140.326,51.442)
C2: (37.289,136.638,49.633)
N1: (37.027,135.574,50.397)
N3: (38.232,137.554,49.772)
N6: (37.555,134.286,52.235)
N7: (39.731,136.348,52.770)
N9: (40.056,137.992,51.301)
O5': (43.651,139.070,52.425)
O3': (41.645,141.612,49.538)
OP1: (44.695,129.519,61.973)
OP2: (44.504,131.584,60.517)
C3': (41.722,128.153,58.456)
C1': (39.766,129.416,58.068)
C5': (41.923,128.822,60.878)
O4': (40.024,129.400,59.462)
C8: (40.571,131.812,58.295)
O2': (39.883,127.092,57.358)
C6: (39.997,133.405,55.202)
C5: (40.159,132.631,56.377)
C4: (39.744,131.307,56.328)
P: (43.863,130.561,61.358)
C4': (41.004,128.379,59.764)
C2': (40.610,128.299,57.438)
C2: (39.080,131.519,54.234)
N1: (39.437,132.804,54.132)
N3: (39.191,130.685,55.271)
N6: (40.369,134.687,55.094)
N7: (40.672,132.936,57.629)
N9: (40.017,130.780,57.575)
O5': (42.807,129.856,60.405)
O3': (42.284,126.861,58.441)
Image (generated by PyMOL):
PyMOL image
show in jmol