Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A41:A49
Extra
PDB:
ATOM 1 O3' C A 40 -3.693 55.528 1.611 1.00 43.33 O
ATOM 2 P A A 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A A 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A A 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A A 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A A 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A A 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A A 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A A 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A A 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A A 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A A 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A A 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A A 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A A 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A A 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A A 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A A 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A A 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A A 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A A 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A A 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A A 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
TER
ATOM 1 O3' G B 48 -15.772 48.206 0.548 1.00 39.57 O
ATOM 2 P A B 49 -15.993 49.802 0.588 1.00 40.85 P
ATOM 3 OP1 A B 49 -16.780 50.148 -0.618 1.00 40.60 O
ATOM 4 OP2 A B 49 -14.699 50.495 0.803 1.00 40.38 O
ATOM 5 O5' A B 49 -16.861 50.022 1.921 1.00 40.24 O
ATOM 6 C5' A B 49 -17.386 48.911 2.651 1.00 41.04 C
ATOM 7 C4' A B 49 -17.210 49.041 4.159 1.00 41.47 C
ATOM 8 O4' A B 49 -15.907 48.546 4.571 1.00 41.34 O
ATOM 9 C3' A B 49 -17.264 50.451 4.727 1.00 41.69 C
ATOM 10 O3' A B 49 -18.606 50.857 4.911 1.00 42.57 O
ATOM 11 C2' A B 49 -16.524 50.299 6.052 1.00 41.08 C
ATOM 12 O2' A B 49 -17.333 49.779 7.092 1.00 41.55 O
ATOM 13 C1' A B 49 -15.429 49.305 5.674 1.00 39.84 C
ATOM 14 N9 A B 49 -14.163 49.947 5.317 1.00 38.39 N
ATOM 15 C8 A B 49 -13.616 50.067 4.068 1.00 37.93 C
ATOM 16 N7 A B 49 -12.461 50.691 4.048 1.00 37.60 N
ATOM 17 C5 A B 49 -12.235 51.005 5.378 1.00 37.40 C
ATOM 18 C6 A B 49 -11.179 51.672 6.034 1.00 37.04 C
ATOM 19 N6 A B 49 -10.115 52.158 5.393 1.00 37.55 N
ATOM 20 N1 A B 49 -11.256 51.821 7.375 1.00 37.00 N
ATOM 21 C2 A B 49 -12.327 51.331 8.014 1.00 37.02 C
ATOM 22 N3 A B 49 -13.379 50.684 7.507 1.00 37.03 N
ATOM 23 C4 A B 49 -13.273 50.552 6.174 1.00 37.52 C
ATOM 24 P A B 50 -19.023 52.354 4.530 1.00 43.67 P
ATOM 25 OP1 A B 50 -20.472 52.460 4.819 1.00 43.95 O
ATOM 26 OP2 A B 50 -18.515 52.670 3.172 1.00 43.00 O
ATOM 27 O5' A B 50 -18.202 53.251 5.576 1.00 43.37 O
TER
ATOM 2 P A A 41 -3.564 54.116 2.350 1.00 41.41 P
ATOM 3 OP1 A A 41 -2.158 53.677 2.179 1.00 41.44 O
ATOM 4 OP2 A A 41 -4.673 53.237 1.899 1.00 40.59 O
ATOM 5 O5' A A 41 -3.818 54.506 3.884 1.00 38.61 O
ATOM 6 C5' A A 41 -2.732 54.874 4.731 1.00 35.18 C
ATOM 7 C4' A A 41 -2.773 54.088 6.029 1.00 32.74 C
ATOM 8 O4' A A 41 -4.069 54.247 6.666 1.00 31.93 O
ATOM 9 C3' A A 41 -2.561 52.582 5.876 1.00 31.74 C
ATOM 10 O3' A A 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 11 C2' A A 41 -3.872 51.974 6.372 1.00 31.28 C
ATOM 12 O2' A A 41 -3.693 50.746 7.047 1.00 31.78 O
ATOM 13 C1' A A 41 -4.350 53.045 7.346 1.00 30.77 C
ATOM 14 N9 A A 41 -5.771 52.936 7.687 1.00 29.93 N
ATOM 15 C8 A A 41 -6.825 52.909 6.816 1.00 29.44 C
ATOM 16 N7 A A 41 -7.993 52.790 7.403 1.00 29.42 N
ATOM 17 C5 A A 41 -7.691 52.738 8.753 1.00 29.23 C
ATOM 18 C6 A A 41 -8.498 52.612 9.910 1.00 29.19 C
ATOM 19 N6 A A 41 -9.832 52.515 9.863 1.00 29.47 N
ATOM 20 N1 A A 41 -7.882 52.588 11.117 1.00 28.67 N
ATOM 21 C2 A A 41 -6.546 52.684 11.159 1.00 28.40 C
ATOM 22 N3 A A 41 -5.688 52.804 10.140 1.00 28.73 N
ATOM 23 C4 A A 41 -6.323 52.826 8.951 1.00 29.26 C
ATOM 24 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 25 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 26 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 27 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
TER
ATOM 1 O3' G B 48 -15.772 48.206 0.548 1.00 39.57 O
ATOM 2 P A B 49 -15.993 49.802 0.588 1.00 40.85 P
ATOM 3 OP1 A B 49 -16.780 50.148 -0.618 1.00 40.60 O
ATOM 4 OP2 A B 49 -14.699 50.495 0.803 1.00 40.38 O
ATOM 5 O5' A B 49 -16.861 50.022 1.921 1.00 40.24 O
ATOM 6 C5' A B 49 -17.386 48.911 2.651 1.00 41.04 C
ATOM 7 C4' A B 49 -17.210 49.041 4.159 1.00 41.47 C
ATOM 8 O4' A B 49 -15.907 48.546 4.571 1.00 41.34 O
ATOM 9 C3' A B 49 -17.264 50.451 4.727 1.00 41.69 C
ATOM 10 O3' A B 49 -18.606 50.857 4.911 1.00 42.57 O
ATOM 11 C2' A B 49 -16.524 50.299 6.052 1.00 41.08 C
ATOM 12 O2' A B 49 -17.333 49.779 7.092 1.00 41.55 O
ATOM 13 C1' A B 49 -15.429 49.305 5.674 1.00 39.84 C
ATOM 14 N9 A B 49 -14.163 49.947 5.317 1.00 38.39 N
ATOM 15 C8 A B 49 -13.616 50.067 4.068 1.00 37.93 C
ATOM 16 N7 A B 49 -12.461 50.691 4.048 1.00 37.60 N
ATOM 17 C5 A B 49 -12.235 51.005 5.378 1.00 37.40 C
ATOM 18 C6 A B 49 -11.179 51.672 6.034 1.00 37.04 C
ATOM 19 N6 A B 49 -10.115 52.158 5.393 1.00 37.55 N
ATOM 20 N1 A B 49 -11.256 51.821 7.375 1.00 37.00 N
ATOM 21 C2 A B 49 -12.327 51.331 8.014 1.00 37.02 C
ATOM 22 N3 A B 49 -13.379 50.684 7.507 1.00 37.03 N
ATOM 23 C4 A B 49 -13.273 50.552 6.174 1.00 37.52 C
ATOM 24 P A B 50 -19.023 52.354 4.530 1.00 43.67 P
ATOM 25 OP1 A B 50 -20.472 52.460 4.819 1.00 43.95 O
ATOM 26 OP2 A B 50 -18.515 52.670 3.172 1.00 43.00 O
ATOM 27 O5' A B 50 -18.202 53.251 5.576 1.00 43.37 O
TER
Atoms:
OP1: (-2.158,53.677,2.179)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
OP2: (-4.673,53.237,1.899)
C3': (-2.561,52.582,5.876)
C1': (-4.350,53.045,7.346)
C5': (-2.732,54.874,4.731)
O4': (-4.069,54.247,6.666)
C8: (-6.825,52.909,6.816)
O2': (-3.693,50.746,7.047)
C6: (-8.498,52.612,9.910)
C5: (-7.691,52.738,8.753)
C4: (-6.323,52.826,8.951)
P: (-3.564,54.116,2.350)
C4': (-2.773,54.088,6.029)
C2': (-3.872,51.974,6.372)
C2: (-6.546,52.684,11.159)
N1: (-7.882,52.588,11.117)
N3: (-5.688,52.804,10.140)
N6: (-9.832,52.515,9.863)
N7: (-7.993,52.790,7.403)
N9: (-5.771,52.936,7.687)
O5': (-3.818,54.506,3.884)
O3': (-1.447,52.164,6.661)
OP1: (-16.780,50.148,-0.618)
OP2: (-14.699,50.495,0.803)
C3': (-17.264,50.451,4.727)
C1': (-15.429,49.305,5.674)
C5': (-17.386,48.911,2.651)
O4': (-15.907,48.546,4.571)
C8: (-13.616,50.067,4.068)
O2': (-17.333,49.779,7.092)
C6: (-11.179,51.672,6.034)
C5: (-12.235,51.005,5.378)
C4: (-13.273,50.552,6.174)
P: (-15.993,49.802,0.588)
C4': (-17.210,49.041,4.159)
C2': (-16.524,50.299,6.052)
C2: (-12.327,51.331,8.014)
N1: (-11.256,51.821,7.375)
N3: (-13.379,50.684,7.507)
N6: (-10.115,52.158,5.393)
N7: (-12.461,50.691,4.048)
N9: (-14.163,49.947,5.317)
O5': (-16.861,50.022,1.921)
O3': (-18.606,50.857,4.911)
OP2: (-14.699,50.495,0.803)
C3': (-17.264,50.451,4.727)
C1': (-15.429,49.305,5.674)
C5': (-17.386,48.911,2.651)
O4': (-15.907,48.546,4.571)
C8: (-13.616,50.067,4.068)
O2': (-17.333,49.779,7.092)
C6: (-11.179,51.672,6.034)
C5: (-12.235,51.005,5.378)
C4: (-13.273,50.552,6.174)
P: (-15.993,49.802,0.588)
C4': (-17.210,49.041,4.159)
C2': (-16.524,50.299,6.052)
C2: (-12.327,51.331,8.014)
N1: (-11.256,51.821,7.375)
N3: (-13.379,50.684,7.507)
N6: (-10.115,52.158,5.393)
N7: (-12.461,50.691,4.048)
N9: (-14.163,49.947,5.317)
O5': (-16.861,50.022,1.921)
O3': (-18.606,50.857,4.911)
Image (generated by PyMOL):