Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.251 54.624 55.175 1.00 80.86 O
ATOM 2 P U A 701 3.821 54.984 55.824 1.00 82.91 P
ATOM 3 OP1 U A 701 2.784 54.216 55.088 1.00 83.08 O
ATOM 4 OP2 U A 701 3.698 56.464 55.928 1.00 82.31 O
ATOM 5 O5' U A 701 3.925 54.402 57.303 1.00 81.85 O
ATOM 6 C5' U A 701 2.781 54.377 58.177 1.00 81.10 C
ATOM 7 C4' U A 701 2.849 53.171 59.090 1.00 81.00 C
ATOM 8 O4' U A 701 2.792 51.965 58.279 1.00 80.37 O
ATOM 9 C3' U A 701 4.108 53.046 59.946 1.00 80.77 C
ATOM 10 O3' U A 701 3.778 52.414 61.176 1.00 82.93 O
ATOM 11 C2' U A 701 4.995 52.134 59.101 1.00 79.87 C
ATOM 12 O2' U A 701 5.946 51.414 59.859 1.00 77.98 O
ATOM 13 C1' U A 701 3.961 51.194 58.482 1.00 79.04 C
ATOM 14 N1 U A 701 4.364 50.625 57.186 1.00 78.35 N
ATOM 15 C2 U A 701 4.472 49.245 57.088 1.00 78.27 C
ATOM 16 O2 U A 701 4.244 48.488 58.020 1.00 78.17 O
ATOM 17 N3 U A 701 4.859 48.782 55.853 1.00 77.82 N
ATOM 18 C4 U A 701 5.142 49.534 54.731 1.00 77.28 C
ATOM 19 O4 U A 701 5.484 48.966 53.692 1.00 76.62 O
ATOM 20 C5 U A 701 5.001 50.945 54.908 1.00 77.27 C
ATOM 21 C6 U A 701 4.627 51.431 56.097 1.00 78.02 C
ATOM 22 P U A 702 3.506 53.308 62.486 1.00 85.66 P
ATOM 23 OP1 U A 702 3.127 52.388 63.583 1.00 87.46 O
ATOM 24 OP2 U A 702 2.584 54.420 62.114 1.00 84.40 O
ATOM 25 O5' U A 702 4.930 53.932 62.842 1.00 88.12 O
TER
ATOM 1 O3' G B 699 8.241 59.168 52.621 1.00 73.42 O
ATOM 2 P C B 700 6.812 58.906 53.313 1.00 74.49 P
ATOM 3 OP1 C B 700 5.911 58.519 52.200 1.00 75.95 O
ATOM 4 OP2 C B 700 6.428 60.031 54.204 1.00 72.55 O
ATOM 5 O5' C B 700 7.078 57.627 54.222 1.00 75.90 O
ATOM 6 C5' C B 700 7.476 56.378 53.630 1.00 76.98 C
ATOM 7 C4' C B 700 7.566 55.297 54.681 1.00 79.52 C
ATOM 8 O4' C B 700 8.749 55.490 55.504 1.00 79.26 O
ATOM 9 C3' C B 700 6.431 55.230 55.692 1.00 80.06 C
ATOM 10 O3' C B 700 5.251 54.624 55.175 1.00 80.86 O
ATOM 11 C2' C B 700 7.068 54.429 56.821 1.00 80.04 C
ATOM 12 O2' C B 700 7.099 53.037 56.575 1.00 79.17 O
ATOM 13 C1' C B 700 8.496 54.987 56.809 1.00 79.95 C
ATOM 14 N1 C B 700 8.679 56.075 57.790 1.00 79.97 N
ATOM 15 C2 C B 700 9.384 55.803 58.970 1.00 79.18 C
ATOM 16 O2 C B 700 9.886 54.681 59.125 1.00 78.92 O
ATOM 17 N3 C B 700 9.507 56.771 59.905 1.00 78.96 N
ATOM 18 C4 C B 700 8.978 57.978 59.690 1.00 78.96 C
ATOM 19 N4 C B 700 9.121 58.899 60.642 1.00 77.66 N
ATOM 20 C5 C B 700 8.278 58.293 58.486 1.00 79.03 C
ATOM 21 C6 C B 700 8.155 57.322 57.572 1.00 79.54 C
ATOM 22 P U B 701 3.821 54.984 55.824 1.00 82.91 P
ATOM 23 OP1 U B 701 2.784 54.216 55.088 1.00 83.08 O
ATOM 24 OP2 U B 701 3.698 56.464 55.928 1.00 82.31 O
ATOM 25 O5' U B 701 3.925 54.402 57.303 1.00 81.85 O
TER
ATOM 2 P U A 701 3.821 54.984 55.824 1.00 82.91 P
ATOM 3 OP1 U A 701 2.784 54.216 55.088 1.00 83.08 O
ATOM 4 OP2 U A 701 3.698 56.464 55.928 1.00 82.31 O
ATOM 5 O5' U A 701 3.925 54.402 57.303 1.00 81.85 O
ATOM 6 C5' U A 701 2.781 54.377 58.177 1.00 81.10 C
ATOM 7 C4' U A 701 2.849 53.171 59.090 1.00 81.00 C
ATOM 8 O4' U A 701 2.792 51.965 58.279 1.00 80.37 O
ATOM 9 C3' U A 701 4.108 53.046 59.946 1.00 80.77 C
ATOM 10 O3' U A 701 3.778 52.414 61.176 1.00 82.93 O
ATOM 11 C2' U A 701 4.995 52.134 59.101 1.00 79.87 C
ATOM 12 O2' U A 701 5.946 51.414 59.859 1.00 77.98 O
ATOM 13 C1' U A 701 3.961 51.194 58.482 1.00 79.04 C
ATOM 14 N1 U A 701 4.364 50.625 57.186 1.00 78.35 N
ATOM 15 C2 U A 701 4.472 49.245 57.088 1.00 78.27 C
ATOM 16 O2 U A 701 4.244 48.488 58.020 1.00 78.17 O
ATOM 17 N3 U A 701 4.859 48.782 55.853 1.00 77.82 N
ATOM 18 C4 U A 701 5.142 49.534 54.731 1.00 77.28 C
ATOM 19 O4 U A 701 5.484 48.966 53.692 1.00 76.62 O
ATOM 20 C5 U A 701 5.001 50.945 54.908 1.00 77.27 C
ATOM 21 C6 U A 701 4.627 51.431 56.097 1.00 78.02 C
ATOM 22 P U A 702 3.506 53.308 62.486 1.00 85.66 P
ATOM 23 OP1 U A 702 3.127 52.388 63.583 1.00 87.46 O
ATOM 24 OP2 U A 702 2.584 54.420 62.114 1.00 84.40 O
ATOM 25 O5' U A 702 4.930 53.932 62.842 1.00 88.12 O
TER
ATOM 1 O3' G B 699 8.241 59.168 52.621 1.00 73.42 O
ATOM 2 P C B 700 6.812 58.906 53.313 1.00 74.49 P
ATOM 3 OP1 C B 700 5.911 58.519 52.200 1.00 75.95 O
ATOM 4 OP2 C B 700 6.428 60.031 54.204 1.00 72.55 O
ATOM 5 O5' C B 700 7.078 57.627 54.222 1.00 75.90 O
ATOM 6 C5' C B 700 7.476 56.378 53.630 1.00 76.98 C
ATOM 7 C4' C B 700 7.566 55.297 54.681 1.00 79.52 C
ATOM 8 O4' C B 700 8.749 55.490 55.504 1.00 79.26 O
ATOM 9 C3' C B 700 6.431 55.230 55.692 1.00 80.06 C
ATOM 10 O3' C B 700 5.251 54.624 55.175 1.00 80.86 O
ATOM 11 C2' C B 700 7.068 54.429 56.821 1.00 80.04 C
ATOM 12 O2' C B 700 7.099 53.037 56.575 1.00 79.17 O
ATOM 13 C1' C B 700 8.496 54.987 56.809 1.00 79.95 C
ATOM 14 N1 C B 700 8.679 56.075 57.790 1.00 79.97 N
ATOM 15 C2 C B 700 9.384 55.803 58.970 1.00 79.18 C
ATOM 16 O2 C B 700 9.886 54.681 59.125 1.00 78.92 O
ATOM 17 N3 C B 700 9.507 56.771 59.905 1.00 78.96 N
ATOM 18 C4 C B 700 8.978 57.978 59.690 1.00 78.96 C
ATOM 19 N4 C B 700 9.121 58.899 60.642 1.00 77.66 N
ATOM 20 C5 C B 700 8.278 58.293 58.486 1.00 79.03 C
ATOM 21 C6 C B 700 8.155 57.322 57.572 1.00 79.54 C
ATOM 22 P U B 701 3.821 54.984 55.824 1.00 82.91 P
ATOM 23 OP1 U B 701 2.784 54.216 55.088 1.00 83.08 O
ATOM 24 OP2 U B 701 3.698 56.464 55.928 1.00 82.31 O
ATOM 25 O5' U B 701 3.925 54.402 57.303 1.00 81.85 O
TER
Atoms:
C4: (5.142,49.534,54.731)
N3: (4.859,48.782,55.853)
OP1: (2.784,54.216,55.088)
OP2: (3.698,56.464,55.928)
C2: (4.472,49.245,57.088)
C1': (3.961,51.194,58.482)
C3': (4.108,53.046,59.946)
O5': (3.925,54.402,57.303)
O4': (2.792,51.965,58.279)
C5': (2.781,54.377,58.177)
P: (3.821,54.984,55.824)
C4': (2.849,53.171,59.090)
C2': (4.995,52.134,59.101)
O2': (5.946,51.414,59.859)
N1: (4.364,50.625,57.186)
O4: (5.484,48.966,53.692)
O2: (4.244,48.488,58.020)
C6: (4.627,51.431,56.097)
C5: (5.001,50.945,54.908)
O3': (3.778,52.414,61.176)
N3: (4.859,48.782,55.853)
OP1: (2.784,54.216,55.088)
OP2: (3.698,56.464,55.928)
C2: (4.472,49.245,57.088)
C1': (3.961,51.194,58.482)
C3': (4.108,53.046,59.946)
O5': (3.925,54.402,57.303)
O4': (2.792,51.965,58.279)
C5': (2.781,54.377,58.177)
P: (3.821,54.984,55.824)
C4': (2.849,53.171,59.090)
C2': (4.995,52.134,59.101)
O2': (5.946,51.414,59.859)
N1: (4.364,50.625,57.186)
O4: (5.484,48.966,53.692)
O2: (4.244,48.488,58.020)
C6: (4.627,51.431,56.097)
C5: (5.001,50.945,54.908)
O3': (3.778,52.414,61.176)
C2: (9.384,55.803,58.970)
OP1: (5.911,58.519,52.200)
OP2: (6.428,60.031,54.204)
C4: (8.978,57.978,59.690)
O5': (7.078,57.627,54.222)
C3': (6.431,55.230,55.692)
C1': (8.496,54.987,56.809)
O4': (8.749,55.490,55.504)
C5': (7.476,56.378,53.630)
P: (6.812,58.906,53.313)
O2: (9.886,54.681,59.125)
C4': (7.566,55.297,54.681)
C2': (7.068,54.429,56.821)
O2': (7.099,53.037,56.575)
N1: (8.679,56.075,57.790)
N3: (9.507,56.771,59.905)
N4: (9.121,58.899,60.642)
C6: (8.155,57.322,57.572)
C5: (8.278,58.293,58.486)
O3': (5.251,54.624,55.175)
OP1: (5.911,58.519,52.200)
OP2: (6.428,60.031,54.204)
C4: (8.978,57.978,59.690)
O5': (7.078,57.627,54.222)
C3': (6.431,55.230,55.692)
C1': (8.496,54.987,56.809)
O4': (8.749,55.490,55.504)
C5': (7.476,56.378,53.630)
P: (6.812,58.906,53.313)
O2: (9.886,54.681,59.125)
C4': (7.566,55.297,54.681)
C2': (7.068,54.429,56.821)
O2': (7.099,53.037,56.575)
N1: (8.679,56.075,57.790)
N3: (9.507,56.771,59.905)
N4: (9.121,58.899,60.642)
C6: (8.155,57.322,57.572)
C5: (8.278,58.293,58.486)
O3': (5.251,54.624,55.175)
Image (generated by PyMOL):