Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C20:C49
Extra
PDB:
ATOM 1 O3' U A 19 1.966 -28.548 -81.053 1.00 70.41 O
ATOM 2 P A A 20 0.557 -29.309 -80.899 1.00 66.95 P
ATOM 3 OP1 A A 20 0.851 -30.760 -80.829 1.00 61.16 O
ATOM 4 OP2 A A 20 -0.326 -28.815 -81.980 1.00 70.77 O
ATOM 5 O5' A A 20 0.027 -28.796 -79.489 1.00 66.65 O
ATOM 6 C5' A A 20 0.247 -29.554 -78.303 1.00 64.89 C
ATOM 7 C4' A A 20 -0.548 -29.011 -77.140 1.00 69.30 C
ATOM 8 O4' A A 20 -0.082 -27.670 -76.832 1.00 70.38 O
ATOM 9 C3' A A 20 -2.051 -28.894 -77.379 1.00 68.19 C
ATOM 10 O3' A A 20 -2.747 -29.119 -76.155 1.00 72.88 O
ATOM 11 C2' A A 20 -2.212 -27.437 -77.793 1.00 68.17 C
ATOM 12 O2' A A 20 -3.498 -26.901 -77.567 1.00 72.04 O
ATOM 13 C1' A A 20 -1.155 -26.753 -76.933 1.00 66.15 C
ATOM 14 N9 A A 20 -0.640 -25.513 -77.513 1.00 64.79 N
ATOM 15 C8 A A 20 0.379 -25.381 -78.423 1.00 66.11 C
ATOM 16 N7 A A 20 0.611 -24.141 -78.770 1.00 65.48 N
ATOM 17 C5 A A 20 -0.319 -23.413 -78.042 1.00 60.52 C
ATOM 18 C6 A A 20 -0.585 -22.037 -77.969 1.00 60.40 C
ATOM 19 N6 A A 20 0.092 -21.121 -78.664 1.00 61.34 N
ATOM 20 N1 A A 20 -1.579 -21.634 -77.147 1.00 62.69 N
ATOM 21 C2 A A 20 -2.252 -22.560 -76.451 1.00 63.16 C
ATOM 22 N3 A A 20 -2.094 -23.881 -76.437 1.00 62.74 N
ATOM 23 C4 A A 20 -1.099 -24.245 -77.263 1.00 61.61 C
ATOM 24 P U A 21 -3.685 -30.413 -75.991 1.00 88.85 P
ATOM 25 OP1 U A 21 -4.268 -30.703 -77.323 1.00 82.79 O
ATOM 26 OP2 U A 21 -4.601 -30.147 -74.854 1.00 81.38 O
ATOM 27 O5' U A 21 -2.646 -31.551 -75.595 1.00 76.70 O
TER
ATOM 1 O3' U B 48 1.958 -23.448 -88.059 1.00 77.96 O
ATOM 2 P A B 49 3.556 -23.377 -87.852 1.00 89.06 P
ATOM 3 OP1 A B 49 4.158 -24.351 -88.794 1.00 92.30 O
ATOM 4 OP2 A B 49 3.823 -23.538 -86.400 1.00 83.83 O
ATOM 5 O5' A B 49 3.914 -21.896 -88.312 1.00 79.04 O
ATOM 6 C5' A B 49 5.266 -21.504 -88.512 1.00 73.72 C
ATOM 7 C4' A B 49 5.694 -20.460 -87.510 1.00 69.96 C
ATOM 8 O4' A B 49 4.684 -20.331 -86.478 1.00 73.29 O
ATOM 9 C3' A B 49 6.979 -20.755 -86.747 1.00 68.08 C
ATOM 10 O3' A B 49 8.144 -20.401 -87.472 1.00 72.62 O
ATOM 11 C2' A B 49 6.799 -19.962 -85.458 1.00 66.28 C
ATOM 12 O2' A B 49 7.107 -18.591 -85.665 1.00 68.62 O
ATOM 13 C1' A B 49 5.292 -20.089 -85.229 1.00 69.15 C
ATOM 14 N9 A B 49 4.955 -21.204 -84.325 1.00 75.04 N
ATOM 15 C8 A B 49 5.428 -22.493 -84.330 1.00 71.07 C
ATOM 16 N7 A B 49 4.912 -23.248 -83.388 1.00 64.64 N
ATOM 17 C5 A B 49 4.038 -22.400 -82.720 1.00 66.41 C
ATOM 18 C6 A B 49 3.180 -22.588 -81.621 1.00 65.17 C
ATOM 19 N6 A B 49 3.053 -23.740 -80.961 1.00 67.30 N
ATOM 20 N1 A B 49 2.447 -21.532 -81.209 1.00 65.79 N
ATOM 21 C2 A B 49 2.575 -20.375 -81.867 1.00 67.67 C
ATOM 22 N3 A B 49 3.339 -20.071 -82.911 1.00 70.43 N
ATOM 23 C4 A B 49 4.055 -21.141 -83.292 1.00 73.13 C
ATOM 24 P A B 50 9.591 -20.893 -86.974 1.00 65.11 P
ATOM 25 OP1 A B 50 10.526 -20.719 -88.113 1.00 51.11 O
ATOM 26 OP2 A B 50 9.417 -22.248 -86.396 1.00 74.74 O
ATOM 27 O5' A B 50 9.943 -19.853 -85.821 1.00 70.95 O
TER
ATOM 2 P A A 20 0.557 -29.309 -80.899 1.00 66.95 P
ATOM 3 OP1 A A 20 0.851 -30.760 -80.829 1.00 61.16 O
ATOM 4 OP2 A A 20 -0.326 -28.815 -81.980 1.00 70.77 O
ATOM 5 O5' A A 20 0.027 -28.796 -79.489 1.00 66.65 O
ATOM 6 C5' A A 20 0.247 -29.554 -78.303 1.00 64.89 C
ATOM 7 C4' A A 20 -0.548 -29.011 -77.140 1.00 69.30 C
ATOM 8 O4' A A 20 -0.082 -27.670 -76.832 1.00 70.38 O
ATOM 9 C3' A A 20 -2.051 -28.894 -77.379 1.00 68.19 C
ATOM 10 O3' A A 20 -2.747 -29.119 -76.155 1.00 72.88 O
ATOM 11 C2' A A 20 -2.212 -27.437 -77.793 1.00 68.17 C
ATOM 12 O2' A A 20 -3.498 -26.901 -77.567 1.00 72.04 O
ATOM 13 C1' A A 20 -1.155 -26.753 -76.933 1.00 66.15 C
ATOM 14 N9 A A 20 -0.640 -25.513 -77.513 1.00 64.79 N
ATOM 15 C8 A A 20 0.379 -25.381 -78.423 1.00 66.11 C
ATOM 16 N7 A A 20 0.611 -24.141 -78.770 1.00 65.48 N
ATOM 17 C5 A A 20 -0.319 -23.413 -78.042 1.00 60.52 C
ATOM 18 C6 A A 20 -0.585 -22.037 -77.969 1.00 60.40 C
ATOM 19 N6 A A 20 0.092 -21.121 -78.664 1.00 61.34 N
ATOM 20 N1 A A 20 -1.579 -21.634 -77.147 1.00 62.69 N
ATOM 21 C2 A A 20 -2.252 -22.560 -76.451 1.00 63.16 C
ATOM 22 N3 A A 20 -2.094 -23.881 -76.437 1.00 62.74 N
ATOM 23 C4 A A 20 -1.099 -24.245 -77.263 1.00 61.61 C
ATOM 24 P U A 21 -3.685 -30.413 -75.991 1.00 88.85 P
ATOM 25 OP1 U A 21 -4.268 -30.703 -77.323 1.00 82.79 O
ATOM 26 OP2 U A 21 -4.601 -30.147 -74.854 1.00 81.38 O
ATOM 27 O5' U A 21 -2.646 -31.551 -75.595 1.00 76.70 O
TER
ATOM 1 O3' U B 48 1.958 -23.448 -88.059 1.00 77.96 O
ATOM 2 P A B 49 3.556 -23.377 -87.852 1.00 89.06 P
ATOM 3 OP1 A B 49 4.158 -24.351 -88.794 1.00 92.30 O
ATOM 4 OP2 A B 49 3.823 -23.538 -86.400 1.00 83.83 O
ATOM 5 O5' A B 49 3.914 -21.896 -88.312 1.00 79.04 O
ATOM 6 C5' A B 49 5.266 -21.504 -88.512 1.00 73.72 C
ATOM 7 C4' A B 49 5.694 -20.460 -87.510 1.00 69.96 C
ATOM 8 O4' A B 49 4.684 -20.331 -86.478 1.00 73.29 O
ATOM 9 C3' A B 49 6.979 -20.755 -86.747 1.00 68.08 C
ATOM 10 O3' A B 49 8.144 -20.401 -87.472 1.00 72.62 O
ATOM 11 C2' A B 49 6.799 -19.962 -85.458 1.00 66.28 C
ATOM 12 O2' A B 49 7.107 -18.591 -85.665 1.00 68.62 O
ATOM 13 C1' A B 49 5.292 -20.089 -85.229 1.00 69.15 C
ATOM 14 N9 A B 49 4.955 -21.204 -84.325 1.00 75.04 N
ATOM 15 C8 A B 49 5.428 -22.493 -84.330 1.00 71.07 C
ATOM 16 N7 A B 49 4.912 -23.248 -83.388 1.00 64.64 N
ATOM 17 C5 A B 49 4.038 -22.400 -82.720 1.00 66.41 C
ATOM 18 C6 A B 49 3.180 -22.588 -81.621 1.00 65.17 C
ATOM 19 N6 A B 49 3.053 -23.740 -80.961 1.00 67.30 N
ATOM 20 N1 A B 49 2.447 -21.532 -81.209 1.00 65.79 N
ATOM 21 C2 A B 49 2.575 -20.375 -81.867 1.00 67.67 C
ATOM 22 N3 A B 49 3.339 -20.071 -82.911 1.00 70.43 N
ATOM 23 C4 A B 49 4.055 -21.141 -83.292 1.00 73.13 C
ATOM 24 P A B 50 9.591 -20.893 -86.974 1.00 65.11 P
ATOM 25 OP1 A B 50 10.526 -20.719 -88.113 1.00 51.11 O
ATOM 26 OP2 A B 50 9.417 -22.248 -86.396 1.00 74.74 O
ATOM 27 O5' A B 50 9.943 -19.853 -85.821 1.00 70.95 O
TER
Atoms:
OP1: (0.851,-30.760,-80.829)
OP2: (-0.326,-28.815,-81.980)
C3': (-2.051,-28.894,-77.379)
C1': (-1.155,-26.753,-76.933)
C5': (0.247,-29.554,-78.303)
O4': (-0.082,-27.670,-76.832)
C8: (0.379,-25.381,-78.423)
O2': (-3.498,-26.901,-77.567)
C6: (-0.585,-22.037,-77.969)
C5: (-0.319,-23.413,-78.042)
C4: (-1.099,-24.245,-77.263)
P: (0.557,-29.309,-80.899)
C4': (-0.548,-29.011,-77.140)
C2': (-2.212,-27.437,-77.793)
C2: (-2.252,-22.560,-76.451)
N1: (-1.579,-21.634,-77.147)
N3: (-2.094,-23.881,-76.437)
N6: (0.092,-21.121,-78.664)
N7: (0.611,-24.141,-78.770)
N9: (-0.640,-25.513,-77.513)
O5': (0.027,-28.796,-79.489)
O3': (-2.747,-29.119,-76.155)
OP2: (-0.326,-28.815,-81.980)
C3': (-2.051,-28.894,-77.379)
C1': (-1.155,-26.753,-76.933)
C5': (0.247,-29.554,-78.303)
O4': (-0.082,-27.670,-76.832)
C8: (0.379,-25.381,-78.423)
O2': (-3.498,-26.901,-77.567)
C6: (-0.585,-22.037,-77.969)
C5: (-0.319,-23.413,-78.042)
C4: (-1.099,-24.245,-77.263)
P: (0.557,-29.309,-80.899)
C4': (-0.548,-29.011,-77.140)
C2': (-2.212,-27.437,-77.793)
C2: (-2.252,-22.560,-76.451)
N1: (-1.579,-21.634,-77.147)
N3: (-2.094,-23.881,-76.437)
N6: (0.092,-21.121,-78.664)
N7: (0.611,-24.141,-78.770)
N9: (-0.640,-25.513,-77.513)
O5': (0.027,-28.796,-79.489)
O3': (-2.747,-29.119,-76.155)
OP1: (4.158,-24.351,-88.794)
OP2: (3.823,-23.538,-86.400)
C3': (6.979,-20.755,-86.747)
C1': (5.292,-20.089,-85.229)
C5': (5.266,-21.504,-88.512)
O4': (4.684,-20.331,-86.478)
C8: (5.428,-22.493,-84.330)
O2': (7.107,-18.591,-85.665)
C6: (3.180,-22.588,-81.621)
C5: (4.038,-22.400,-82.720)
C4: (4.055,-21.141,-83.292)
P: (3.556,-23.377,-87.852)
C4': (5.694,-20.460,-87.510)
C2': (6.799,-19.962,-85.458)
C2: (2.575,-20.375,-81.867)
N1: (2.447,-21.532,-81.209)
N3: (3.339,-20.071,-82.911)
N6: (3.053,-23.740,-80.961)
N7: (4.912,-23.248,-83.388)
N9: (4.955,-21.204,-84.325)
O5': (3.914,-21.896,-88.312)
O3': (8.144,-20.401,-87.472)
OP2: (3.823,-23.538,-86.400)
C3': (6.979,-20.755,-86.747)
C1': (5.292,-20.089,-85.229)
C5': (5.266,-21.504,-88.512)
O4': (4.684,-20.331,-86.478)
C8: (5.428,-22.493,-84.330)
O2': (7.107,-18.591,-85.665)
C6: (3.180,-22.588,-81.621)
C5: (4.038,-22.400,-82.720)
C4: (4.055,-21.141,-83.292)
P: (3.556,-23.377,-87.852)
C4': (5.694,-20.460,-87.510)
C2': (6.799,-19.962,-85.458)
C2: (2.575,-20.375,-81.867)
N1: (2.447,-21.532,-81.209)
N3: (3.339,-20.071,-82.911)
N6: (3.053,-23.740,-80.961)
N7: (4.912,-23.248,-83.388)
N9: (4.955,-21.204,-84.325)
O5': (3.914,-21.896,-88.312)
O3': (8.144,-20.401,-87.472)
Image (generated by PyMOL):