Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.119 54.362 54.875 1.00 67.55 O
ATOM 2 P U A 701 3.687 54.722 55.515 1.00 69.16 P
ATOM 3 OP1 U A 701 2.665 53.990 54.726 1.00 70.48 O
ATOM 4 OP2 U A 701 3.575 56.200 55.666 1.00 68.27 O
ATOM 5 O5' U A 701 3.779 54.094 56.976 1.00 67.32 O
ATOM 6 C5' U A 701 2.652 54.102 57.871 1.00 66.97 C
ATOM 7 C4' U A 701 2.718 52.904 58.794 1.00 66.60 C
ATOM 8 O4' U A 701 2.652 51.699 57.982 1.00 66.39 O
ATOM 9 C3' U A 701 3.992 52.782 59.627 1.00 66.46 C
ATOM 10 O3' U A 701 3.692 52.156 60.871 1.00 67.35 O
ATOM 11 C2' U A 701 4.870 51.889 58.754 1.00 66.09 C
ATOM 12 O2' U A 701 5.863 51.179 59.464 1.00 64.04 O
ATOM 13 C1' U A 701 3.835 50.942 58.149 1.00 66.29 C
ATOM 14 N1 U A 701 4.222 50.403 56.835 1.00 66.83 N
ATOM 15 C2 U A 701 4.405 49.031 56.722 1.00 66.83 C
ATOM 16 O2 U A 701 4.243 48.259 57.649 1.00 67.88 O
ATOM 17 N3 U A 701 4.785 48.599 55.477 1.00 66.30 N
ATOM 18 C4 U A 701 4.984 49.374 54.355 1.00 65.79 C
ATOM 19 O4 U A 701 5.326 48.835 53.305 1.00 66.68 O
ATOM 20 C5 U A 701 4.763 50.773 54.546 1.00 65.98 C
ATOM 21 C6 U A 701 4.400 51.229 55.748 1.00 65.93 C
ATOM 22 P U A 702 3.394 53.061 62.167 1.00 67.61 P
ATOM 23 OP1 U A 702 2.912 52.191 63.262 1.00 68.79 O
ATOM 24 OP2 U A 702 2.553 54.201 61.718 1.00 67.00 O
ATOM 25 O5' U A 702 4.822 53.628 62.591 1.00 71.31 O
TER
ATOM 1 O3' G B 699 8.039 58.924 52.397 1.00 61.93 O
ATOM 2 P C B 700 6.651 58.711 53.180 1.00 64.21 P
ATOM 3 OP1 C B 700 5.649 58.414 52.122 1.00 65.56 O
ATOM 4 OP2 C B 700 6.400 59.821 54.133 1.00 62.16 O
ATOM 5 O5' C B 700 6.911 57.390 54.030 1.00 64.84 O
ATOM 6 C5' C B 700 7.291 56.165 53.379 1.00 64.76 C
ATOM 7 C4' C B 700 7.413 55.051 54.386 1.00 66.32 C
ATOM 8 O4' C B 700 8.604 55.231 55.200 1.00 66.69 O
ATOM 9 C3' C B 700 6.296 54.954 55.410 1.00 66.88 C
ATOM 10 O3' C B 700 5.119 54.362 54.875 1.00 67.55 O
ATOM 11 C2' C B 700 6.949 54.119 56.506 1.00 66.75 C
ATOM 12 O2' C B 700 6.996 52.737 56.208 1.00 66.94 O
ATOM 13 C1' C B 700 8.378 54.673 56.489 1.00 66.25 C
ATOM 14 N1 C B 700 8.620 55.703 57.523 1.00 64.87 N
ATOM 15 C2 C B 700 9.239 55.317 58.726 1.00 62.79 C
ATOM 16 O2 C B 700 9.585 54.136 58.875 1.00 61.77 O
ATOM 17 N3 C B 700 9.446 56.241 59.688 1.00 61.76 N
ATOM 18 C4 C B 700 9.071 57.505 59.491 1.00 62.13 C
ATOM 19 N4 C B 700 9.293 58.380 60.474 1.00 62.63 N
ATOM 20 C5 C B 700 8.451 57.930 58.278 1.00 62.16 C
ATOM 21 C6 C B 700 8.247 57.007 57.330 1.00 63.60 C
ATOM 22 P U B 701 3.687 54.722 55.515 1.00 69.16 P
ATOM 23 OP1 U B 701 2.665 53.990 54.726 1.00 70.48 O
ATOM 24 OP2 U B 701 3.575 56.200 55.666 1.00 68.27 O
ATOM 25 O5' U B 701 3.779 54.094 56.976 1.00 67.32 O
TER
ATOM 2 P U A 701 3.687 54.722 55.515 1.00 69.16 P
ATOM 3 OP1 U A 701 2.665 53.990 54.726 1.00 70.48 O
ATOM 4 OP2 U A 701 3.575 56.200 55.666 1.00 68.27 O
ATOM 5 O5' U A 701 3.779 54.094 56.976 1.00 67.32 O
ATOM 6 C5' U A 701 2.652 54.102 57.871 1.00 66.97 C
ATOM 7 C4' U A 701 2.718 52.904 58.794 1.00 66.60 C
ATOM 8 O4' U A 701 2.652 51.699 57.982 1.00 66.39 O
ATOM 9 C3' U A 701 3.992 52.782 59.627 1.00 66.46 C
ATOM 10 O3' U A 701 3.692 52.156 60.871 1.00 67.35 O
ATOM 11 C2' U A 701 4.870 51.889 58.754 1.00 66.09 C
ATOM 12 O2' U A 701 5.863 51.179 59.464 1.00 64.04 O
ATOM 13 C1' U A 701 3.835 50.942 58.149 1.00 66.29 C
ATOM 14 N1 U A 701 4.222 50.403 56.835 1.00 66.83 N
ATOM 15 C2 U A 701 4.405 49.031 56.722 1.00 66.83 C
ATOM 16 O2 U A 701 4.243 48.259 57.649 1.00 67.88 O
ATOM 17 N3 U A 701 4.785 48.599 55.477 1.00 66.30 N
ATOM 18 C4 U A 701 4.984 49.374 54.355 1.00 65.79 C
ATOM 19 O4 U A 701 5.326 48.835 53.305 1.00 66.68 O
ATOM 20 C5 U A 701 4.763 50.773 54.546 1.00 65.98 C
ATOM 21 C6 U A 701 4.400 51.229 55.748 1.00 65.93 C
ATOM 22 P U A 702 3.394 53.061 62.167 1.00 67.61 P
ATOM 23 OP1 U A 702 2.912 52.191 63.262 1.00 68.79 O
ATOM 24 OP2 U A 702 2.553 54.201 61.718 1.00 67.00 O
ATOM 25 O5' U A 702 4.822 53.628 62.591 1.00 71.31 O
TER
ATOM 1 O3' G B 699 8.039 58.924 52.397 1.00 61.93 O
ATOM 2 P C B 700 6.651 58.711 53.180 1.00 64.21 P
ATOM 3 OP1 C B 700 5.649 58.414 52.122 1.00 65.56 O
ATOM 4 OP2 C B 700 6.400 59.821 54.133 1.00 62.16 O
ATOM 5 O5' C B 700 6.911 57.390 54.030 1.00 64.84 O
ATOM 6 C5' C B 700 7.291 56.165 53.379 1.00 64.76 C
ATOM 7 C4' C B 700 7.413 55.051 54.386 1.00 66.32 C
ATOM 8 O4' C B 700 8.604 55.231 55.200 1.00 66.69 O
ATOM 9 C3' C B 700 6.296 54.954 55.410 1.00 66.88 C
ATOM 10 O3' C B 700 5.119 54.362 54.875 1.00 67.55 O
ATOM 11 C2' C B 700 6.949 54.119 56.506 1.00 66.75 C
ATOM 12 O2' C B 700 6.996 52.737 56.208 1.00 66.94 O
ATOM 13 C1' C B 700 8.378 54.673 56.489 1.00 66.25 C
ATOM 14 N1 C B 700 8.620 55.703 57.523 1.00 64.87 N
ATOM 15 C2 C B 700 9.239 55.317 58.726 1.00 62.79 C
ATOM 16 O2 C B 700 9.585 54.136 58.875 1.00 61.77 O
ATOM 17 N3 C B 700 9.446 56.241 59.688 1.00 61.76 N
ATOM 18 C4 C B 700 9.071 57.505 59.491 1.00 62.13 C
ATOM 19 N4 C B 700 9.293 58.380 60.474 1.00 62.63 N
ATOM 20 C5 C B 700 8.451 57.930 58.278 1.00 62.16 C
ATOM 21 C6 C B 700 8.247 57.007 57.330 1.00 63.60 C
ATOM 22 P U B 701 3.687 54.722 55.515 1.00 69.16 P
ATOM 23 OP1 U B 701 2.665 53.990 54.726 1.00 70.48 O
ATOM 24 OP2 U B 701 3.575 56.200 55.666 1.00 68.27 O
ATOM 25 O5' U B 701 3.779 54.094 56.976 1.00 67.32 O
TER
Atoms:
C4: (4.984,49.374,54.355)
N3: (4.785,48.599,55.477)
OP1: (2.665,53.990,54.726)
OP2: (3.575,56.200,55.666)
C2: (4.405,49.031,56.722)
C1': (3.835,50.942,58.149)
C3': (3.992,52.782,59.627)
O5': (3.779,54.094,56.976)
O4': (2.652,51.699,57.982)
C5': (2.652,54.102,57.871)
P: (3.687,54.722,55.515)
C4': (2.718,52.904,58.794)
C2': (4.870,51.889,58.754)
O2': (5.863,51.179,59.464)
N1: (4.222,50.403,56.835)
O4: (5.326,48.835,53.305)
O2: (4.243,48.259,57.649)
C6: (4.400,51.229,55.748)
C5: (4.763,50.773,54.546)
O3': (3.692,52.156,60.871)
N3: (4.785,48.599,55.477)
OP1: (2.665,53.990,54.726)
OP2: (3.575,56.200,55.666)
C2: (4.405,49.031,56.722)
C1': (3.835,50.942,58.149)
C3': (3.992,52.782,59.627)
O5': (3.779,54.094,56.976)
O4': (2.652,51.699,57.982)
C5': (2.652,54.102,57.871)
P: (3.687,54.722,55.515)
C4': (2.718,52.904,58.794)
C2': (4.870,51.889,58.754)
O2': (5.863,51.179,59.464)
N1: (4.222,50.403,56.835)
O4: (5.326,48.835,53.305)
O2: (4.243,48.259,57.649)
C6: (4.400,51.229,55.748)
C5: (4.763,50.773,54.546)
O3': (3.692,52.156,60.871)
C2: (9.239,55.317,58.726)
OP1: (5.649,58.414,52.122)
OP2: (6.400,59.821,54.133)
C4: (9.071,57.505,59.491)
O5': (6.911,57.390,54.030)
C3': (6.296,54.954,55.410)
C1': (8.378,54.673,56.489)
O4': (8.604,55.231,55.200)
C5': (7.291,56.165,53.379)
P: (6.651,58.711,53.180)
O2: (9.585,54.136,58.875)
C4': (7.413,55.051,54.386)
C2': (6.949,54.119,56.506)
O2': (6.996,52.737,56.208)
N1: (8.620,55.703,57.523)
N3: (9.446,56.241,59.688)
N4: (9.293,58.380,60.474)
C6: (8.247,57.007,57.330)
C5: (8.451,57.930,58.278)
O3': (5.119,54.362,54.875)
OP1: (5.649,58.414,52.122)
OP2: (6.400,59.821,54.133)
C4: (9.071,57.505,59.491)
O5': (6.911,57.390,54.030)
C3': (6.296,54.954,55.410)
C1': (8.378,54.673,56.489)
O4': (8.604,55.231,55.200)
C5': (7.291,56.165,53.379)
P: (6.651,58.711,53.180)
O2: (9.585,54.136,58.875)
C4': (7.413,55.051,54.386)
C2': (6.949,54.119,56.506)
O2': (6.996,52.737,56.208)
N1: (8.620,55.703,57.523)
N3: (9.446,56.241,59.688)
N4: (9.293,58.380,60.474)
C6: (8.247,57.007,57.330)
C5: (8.451,57.930,58.278)
O3': (5.119,54.362,54.875)
Image (generated by PyMOL):