Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:02086:02085
Extra
PDB:
ATOM 1 O3' C A2085 130.828 104.410 41.129 1.00119.63 O
ATOM 2 P U A2086 130.311 105.904 40.838 1.00117.68 P
ATOM 3 OP1 U A2086 131.230 106.854 41.519 1.00117.69 O
ATOM 4 OP2 U A2086 128.857 105.938 41.149 1.00117.49 O
ATOM 5 O5' U A2086 130.482 106.081 39.262 1.00115.53 O
ATOM 6 C5' U A2086 131.790 106.105 38.655 1.00111.97 C
ATOM 7 C4' U A2086 131.673 106.189 37.148 1.00109.73 C
ATOM 8 O4' U A2086 130.925 105.045 36.656 1.00109.36 O
ATOM 9 C3' U A2086 130.918 107.386 36.590 1.00107.99 C
ATOM 10 O3' U A2086 131.740 108.545 36.506 1.00105.45 O
ATOM 11 C2' U A2086 130.502 106.888 35.212 1.00108.07 C
ATOM 12 O2' U A2086 131.550 106.945 34.263 1.00107.54 O
ATOM 13 C1' U A2086 130.174 105.423 35.510 1.00108.39 C
ATOM 14 N1 U A2086 128.745 105.188 35.777 1.00108.66 N
ATOM 15 C2 U A2086 127.883 105.135 34.688 1.00108.92 C
ATOM 16 O2 U A2086 128.254 105.279 33.533 1.00109.27 O
ATOM 17 N3 U A2086 126.567 104.906 35.003 1.00108.58 N
ATOM 18 C4 U A2086 126.032 104.726 36.260 1.00108.45 C
ATOM 19 O4 U A2086 124.824 104.521 36.378 1.00108.57 O
ATOM 20 C5 U A2086 126.979 104.801 37.329 1.00108.53 C
ATOM 21 C6 U A2086 128.269 105.024 37.060 1.00108.45 C
ATOM 22 P C A2087 131.065 110.006 36.499 1.00104.49 P
ATOM 23 OP1 C A2087 132.170 110.995 36.371 1.00103.66 O
ATOM 24 OP2 C A2087 130.133 110.092 37.655 1.00104.86 O
ATOM 25 O5' C A2087 130.204 110.041 35.155 1.00100.10 O
TER
ATOM 1 O3' A B2084 128.863 100.278 45.195 1.00133.67 O
ATOM 2 P C B2085 128.348 101.713 44.687 1.00131.37 P
ATOM 3 OP1 C B2085 129.061 102.737 45.493 1.00131.48 O
ATOM 4 OP2 C B2085 126.863 101.698 44.668 1.00131.35 O
ATOM 5 O5' C B2085 128.864 101.809 43.181 1.00129.47 O
ATOM 6 C5' C B2085 130.272 101.753 42.881 1.00126.45 C
ATOM 7 C4' C B2085 130.520 102.004 41.410 1.00124.18 C
ATOM 8 O4' C B2085 129.859 100.988 40.610 1.00124.05 O
ATOM 9 C3' C B2085 129.989 103.302 40.826 1.00122.57 C
ATOM 10 O3' C B2085 130.828 104.410 41.129 1.00119.63 O
ATOM 11 C2' C B2085 129.982 102.994 39.333 1.00123.07 C
ATOM 12 O2' C B2085 131.262 103.099 38.739 1.00123.22 O
ATOM 13 C1' C B2085 129.547 101.526 39.331 1.00123.43 C
ATOM 14 N1 C B2085 128.105 101.348 39.056 1.00123.55 N
ATOM 15 C2 C B2085 127.661 101.430 37.724 1.00123.54 C
ATOM 16 O2 C B2085 128.488 101.641 36.823 1.00123.66 O
ATOM 17 N3 C B2085 126.346 101.280 37.455 1.00123.31 N
ATOM 18 C4 C B2085 125.483 101.058 38.447 1.00123.52 C
ATOM 19 N4 C B2085 124.193 100.925 38.132 1.00123.67 N
ATOM 20 C5 C B2085 125.904 100.964 39.807 1.00123.49 C
ATOM 21 C6 C B2085 127.211 101.114 40.064 1.00123.65 C
ATOM 22 P U B2086 130.311 105.904 40.838 1.00117.68 P
ATOM 23 OP1 U B2086 131.230 106.854 41.519 1.00117.69 O
ATOM 24 OP2 U B2086 128.857 105.938 41.149 1.00117.49 O
ATOM 25 O5' U B2086 130.482 106.081 39.262 1.00115.53 O
TER
ATOM 2 P U A2086 130.311 105.904 40.838 1.00117.68 P
ATOM 3 OP1 U A2086 131.230 106.854 41.519 1.00117.69 O
ATOM 4 OP2 U A2086 128.857 105.938 41.149 1.00117.49 O
ATOM 5 O5' U A2086 130.482 106.081 39.262 1.00115.53 O
ATOM 6 C5' U A2086 131.790 106.105 38.655 1.00111.97 C
ATOM 7 C4' U A2086 131.673 106.189 37.148 1.00109.73 C
ATOM 8 O4' U A2086 130.925 105.045 36.656 1.00109.36 O
ATOM 9 C3' U A2086 130.918 107.386 36.590 1.00107.99 C
ATOM 10 O3' U A2086 131.740 108.545 36.506 1.00105.45 O
ATOM 11 C2' U A2086 130.502 106.888 35.212 1.00108.07 C
ATOM 12 O2' U A2086 131.550 106.945 34.263 1.00107.54 O
ATOM 13 C1' U A2086 130.174 105.423 35.510 1.00108.39 C
ATOM 14 N1 U A2086 128.745 105.188 35.777 1.00108.66 N
ATOM 15 C2 U A2086 127.883 105.135 34.688 1.00108.92 C
ATOM 16 O2 U A2086 128.254 105.279 33.533 1.00109.27 O
ATOM 17 N3 U A2086 126.567 104.906 35.003 1.00108.58 N
ATOM 18 C4 U A2086 126.032 104.726 36.260 1.00108.45 C
ATOM 19 O4 U A2086 124.824 104.521 36.378 1.00108.57 O
ATOM 20 C5 U A2086 126.979 104.801 37.329 1.00108.53 C
ATOM 21 C6 U A2086 128.269 105.024 37.060 1.00108.45 C
ATOM 22 P C A2087 131.065 110.006 36.499 1.00104.49 P
ATOM 23 OP1 C A2087 132.170 110.995 36.371 1.00103.66 O
ATOM 24 OP2 C A2087 130.133 110.092 37.655 1.00104.86 O
ATOM 25 O5' C A2087 130.204 110.041 35.155 1.00100.10 O
TER
ATOM 1 O3' A B2084 128.863 100.278 45.195 1.00133.67 O
ATOM 2 P C B2085 128.348 101.713 44.687 1.00131.37 P
ATOM 3 OP1 C B2085 129.061 102.737 45.493 1.00131.48 O
ATOM 4 OP2 C B2085 126.863 101.698 44.668 1.00131.35 O
ATOM 5 O5' C B2085 128.864 101.809 43.181 1.00129.47 O
ATOM 6 C5' C B2085 130.272 101.753 42.881 1.00126.45 C
ATOM 7 C4' C B2085 130.520 102.004 41.410 1.00124.18 C
ATOM 8 O4' C B2085 129.859 100.988 40.610 1.00124.05 O
ATOM 9 C3' C B2085 129.989 103.302 40.826 1.00122.57 C
ATOM 10 O3' C B2085 130.828 104.410 41.129 1.00119.63 O
ATOM 11 C2' C B2085 129.982 102.994 39.333 1.00123.07 C
ATOM 12 O2' C B2085 131.262 103.099 38.739 1.00123.22 O
ATOM 13 C1' C B2085 129.547 101.526 39.331 1.00123.43 C
ATOM 14 N1 C B2085 128.105 101.348 39.056 1.00123.55 N
ATOM 15 C2 C B2085 127.661 101.430 37.724 1.00123.54 C
ATOM 16 O2 C B2085 128.488 101.641 36.823 1.00123.66 O
ATOM 17 N3 C B2085 126.346 101.280 37.455 1.00123.31 N
ATOM 18 C4 C B2085 125.483 101.058 38.447 1.00123.52 C
ATOM 19 N4 C B2085 124.193 100.925 38.132 1.00123.67 N
ATOM 20 C5 C B2085 125.904 100.964 39.807 1.00123.49 C
ATOM 21 C6 C B2085 127.211 101.114 40.064 1.00123.65 C
ATOM 22 P U B2086 130.311 105.904 40.838 1.00117.68 P
ATOM 23 OP1 U B2086 131.230 106.854 41.519 1.00117.69 O
ATOM 24 OP2 U B2086 128.857 105.938 41.149 1.00117.49 O
ATOM 25 O5' U B2086 130.482 106.081 39.262 1.00115.53 O
TER
Atoms:
C4: (126.032,104.726,36.260)
N3: (126.567,104.906,35.003)
OP1: (131.230,106.854,41.519)
OP2: (128.857,105.938,41.149)
C2: (127.883,105.135,34.688)
C1': (130.174,105.423,35.510)
C3': (130.918,107.386,36.590)
O5': (130.482,106.081,39.262)
O4': (130.925,105.045,36.656)
C5': (131.790,106.105,38.655)
P: (130.311,105.904,40.838)
C4': (131.673,106.189,37.148)
C2': (130.502,106.888,35.212)
O2': (131.550,106.945,34.263)
N1: (128.745,105.188,35.777)
O4: (124.824,104.521,36.378)
O2: (128.254,105.279,33.533)
C6: (128.269,105.024,37.060)
C5: (126.979,104.801,37.329)
O3': (131.740,108.545,36.506)
N3: (126.567,104.906,35.003)
OP1: (131.230,106.854,41.519)
OP2: (128.857,105.938,41.149)
C2: (127.883,105.135,34.688)
C1': (130.174,105.423,35.510)
C3': (130.918,107.386,36.590)
O5': (130.482,106.081,39.262)
O4': (130.925,105.045,36.656)
C5': (131.790,106.105,38.655)
P: (130.311,105.904,40.838)
C4': (131.673,106.189,37.148)
C2': (130.502,106.888,35.212)
O2': (131.550,106.945,34.263)
N1: (128.745,105.188,35.777)
O4: (124.824,104.521,36.378)
O2: (128.254,105.279,33.533)
C6: (128.269,105.024,37.060)
C5: (126.979,104.801,37.329)
O3': (131.740,108.545,36.506)
C2: (127.661,101.430,37.724)
OP1: (129.061,102.737,45.493)
OP2: (126.863,101.698,44.668)
C4: (125.483,101.058,38.447)
O5': (128.864,101.809,43.181)
C3': (129.989,103.302,40.826)
C1': (129.547,101.526,39.331)
O4': (129.859,100.988,40.610)
C5': (130.272,101.753,42.881)
P: (128.348,101.713,44.687)
O2: (128.488,101.641,36.823)
C4': (130.520,102.004,41.410)
C2': (129.982,102.994,39.333)
O2': (131.262,103.099,38.739)
N1: (128.105,101.348,39.056)
N3: (126.346,101.280,37.455)
N4: (124.193,100.925,38.132)
C6: (127.211,101.114,40.064)
C5: (125.904,100.964,39.807)
O3': (130.828,104.410,41.129)
OP1: (129.061,102.737,45.493)
OP2: (126.863,101.698,44.668)
C4: (125.483,101.058,38.447)
O5': (128.864,101.809,43.181)
C3': (129.989,103.302,40.826)
C1': (129.547,101.526,39.331)
O4': (129.859,100.988,40.610)
C5': (130.272,101.753,42.881)
P: (128.348,101.713,44.687)
O2: (128.488,101.641,36.823)
C4': (130.520,102.004,41.410)
C2': (129.982,102.994,39.333)
O2': (131.262,103.099,38.739)
N1: (128.105,101.348,39.056)
N3: (126.346,101.280,37.455)
N4: (124.193,100.925,38.132)
C6: (127.211,101.114,40.064)
C5: (125.904,100.964,39.807)
O3': (130.828,104.410,41.129)
Image (generated by PyMOL):