Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2041:A2453
Extra
PDB:
ATOM 1 O3' G A2040 52.335 128.150 106.424 1.00 34.23 O
ATOM 2 P A A2041 52.785 128.061 104.878 1.00 33.50 P
ATOM 3 OP1 A A2041 53.207 126.671 104.620 1.00 34.65 O
ATOM 4 OP2 A A2041 53.740 129.164 104.631 1.00 35.00 O
ATOM 5 O5' A A2041 51.442 128.321 104.070 1.00 31.78 O
ATOM 6 C5' A A2041 50.344 127.422 104.185 1.00 32.44 C
ATOM 7 C4' A A2041 49.163 127.923 103.394 1.00 34.53 C
ATOM 8 O4' A A2041 48.840 129.273 103.799 1.00 35.92 O
ATOM 9 C3' A A2041 49.339 128.036 101.892 1.00 33.50 C
ATOM 10 O3' A A2041 49.137 126.789 101.265 1.00 32.92 O
ATOM 11 C2' A A2041 48.237 129.016 101.514 1.00 34.80 C
ATOM 12 O2' A A2041 46.973 128.369 101.509 1.00 35.42 O
ATOM 13 C1' A A2041 48.264 129.973 102.706 1.00 35.30 C
ATOM 14 N9 A A2041 49.030 131.205 102.472 1.00 34.15 N
ATOM 15 C8 A A2041 50.278 131.516 102.933 1.00 34.36 C
ATOM 16 N7 A A2041 50.692 132.706 102.580 1.00 33.96 N
ATOM 17 C5 A A2041 49.651 133.211 101.826 1.00 33.92 C
ATOM 18 C6 A A2041 49.477 134.427 101.150 1.00 33.89 C
ATOM 19 N6 A A2041 50.399 135.393 101.105 1.00 32.44 N
ATOM 20 N1 A A2041 48.311 134.615 100.493 1.00 35.07 N
ATOM 21 C2 A A2041 47.403 133.634 100.504 1.00 34.57 C
ATOM 22 N3 A A2041 47.457 132.451 101.090 1.00 35.07 N
ATOM 23 C4 A A2041 48.620 132.297 101.745 1.00 33.94 C
ATOM 24 P A A2042 49.857 126.483 99.873 1.00 32.90 P
ATOM 25 OP1 A A2042 49.923 127.707 99.037 1.00 33.06 O
ATOM 26 OP2 A A2042 49.172 125.295 99.364 1.00 33.61 O
ATOM 27 O5' A A2042 51.336 126.092 100.298 1.00 30.63 O
TER
ATOM 1 O3' G B2452 62.945 134.774 105.270 1.00 31.70 O
ATOM 2 P A B2453 61.438 134.360 105.008 1.00 29.37 P
ATOM 3 OP1 A B2453 60.878 134.061 106.321 1.00 29.29 O
ATOM 4 OP2 A B2453 61.424 133.338 103.954 1.00 30.27 O
ATOM 5 O5' A B2453 60.754 135.675 104.433 1.00 33.29 O
ATOM 6 C5' A B2453 61.283 136.333 103.268 1.00 32.20 C
ATOM 7 C4' A B2453 60.189 137.032 102.495 1.00 33.32 C
ATOM 8 O4' A B2453 59.298 136.081 101.867 1.00 33.67 O
ATOM 9 C3' A B2453 59.257 137.914 103.295 1.00 33.13 C
ATOM 10 O3' A B2453 59.860 139.162 103.536 1.00 34.76 O
ATOM 11 C2' A B2453 58.081 138.064 102.338 1.00 34.46 C
ATOM 12 O2' A B2453 58.263 138.998 101.299 1.00 36.33 O
ATOM 13 C1' A B2453 58.025 136.678 101.711 1.00 32.76 C
ATOM 14 N9 A B2453 57.057 135.902 102.453 1.00 30.67 N
ATOM 15 C8 A B2453 57.238 135.139 103.568 1.00 31.57 C
ATOM 16 N7 A B2453 56.144 134.584 104.006 1.00 31.69 N
ATOM 17 C5 A B2453 55.182 135.005 103.109 1.00 31.44 C
ATOM 18 C6 A B2453 53.820 134.748 103.015 1.00 31.79 C
ATOM 19 N6 A B2453 53.177 133.965 103.870 1.00 29.58 N
ATOM 20 N1 A B2453 53.134 135.331 102.000 1.00 33.27 N
ATOM 21 C2 A B2453 53.807 136.127 101.153 1.00 33.07 C
ATOM 22 N3 A B2453 55.096 136.437 101.144 1.00 31.85 N
ATOM 23 C4 A B2453 55.732 135.829 102.156 1.00 30.68 C
ATOM 24 P G B2454 60.136 139.633 105.033 1.00 34.98 P
ATOM 25 OP1 G B2454 58.852 139.666 105.757 1.00 34.66 O
ATOM 26 OP2 G B2454 60.950 140.856 104.934 1.00 34.16 O
ATOM 27 O5' G B2454 61.011 138.445 105.626 1.00 36.62 O
TER
ATOM 2 P A A2041 52.785 128.061 104.878 1.00 33.50 P
ATOM 3 OP1 A A2041 53.207 126.671 104.620 1.00 34.65 O
ATOM 4 OP2 A A2041 53.740 129.164 104.631 1.00 35.00 O
ATOM 5 O5' A A2041 51.442 128.321 104.070 1.00 31.78 O
ATOM 6 C5' A A2041 50.344 127.422 104.185 1.00 32.44 C
ATOM 7 C4' A A2041 49.163 127.923 103.394 1.00 34.53 C
ATOM 8 O4' A A2041 48.840 129.273 103.799 1.00 35.92 O
ATOM 9 C3' A A2041 49.339 128.036 101.892 1.00 33.50 C
ATOM 10 O3' A A2041 49.137 126.789 101.265 1.00 32.92 O
ATOM 11 C2' A A2041 48.237 129.016 101.514 1.00 34.80 C
ATOM 12 O2' A A2041 46.973 128.369 101.509 1.00 35.42 O
ATOM 13 C1' A A2041 48.264 129.973 102.706 1.00 35.30 C
ATOM 14 N9 A A2041 49.030 131.205 102.472 1.00 34.15 N
ATOM 15 C8 A A2041 50.278 131.516 102.933 1.00 34.36 C
ATOM 16 N7 A A2041 50.692 132.706 102.580 1.00 33.96 N
ATOM 17 C5 A A2041 49.651 133.211 101.826 1.00 33.92 C
ATOM 18 C6 A A2041 49.477 134.427 101.150 1.00 33.89 C
ATOM 19 N6 A A2041 50.399 135.393 101.105 1.00 32.44 N
ATOM 20 N1 A A2041 48.311 134.615 100.493 1.00 35.07 N
ATOM 21 C2 A A2041 47.403 133.634 100.504 1.00 34.57 C
ATOM 22 N3 A A2041 47.457 132.451 101.090 1.00 35.07 N
ATOM 23 C4 A A2041 48.620 132.297 101.745 1.00 33.94 C
ATOM 24 P A A2042 49.857 126.483 99.873 1.00 32.90 P
ATOM 25 OP1 A A2042 49.923 127.707 99.037 1.00 33.06 O
ATOM 26 OP2 A A2042 49.172 125.295 99.364 1.00 33.61 O
ATOM 27 O5' A A2042 51.336 126.092 100.298 1.00 30.63 O
TER
ATOM 1 O3' G B2452 62.945 134.774 105.270 1.00 31.70 O
ATOM 2 P A B2453 61.438 134.360 105.008 1.00 29.37 P
ATOM 3 OP1 A B2453 60.878 134.061 106.321 1.00 29.29 O
ATOM 4 OP2 A B2453 61.424 133.338 103.954 1.00 30.27 O
ATOM 5 O5' A B2453 60.754 135.675 104.433 1.00 33.29 O
ATOM 6 C5' A B2453 61.283 136.333 103.268 1.00 32.20 C
ATOM 7 C4' A B2453 60.189 137.032 102.495 1.00 33.32 C
ATOM 8 O4' A B2453 59.298 136.081 101.867 1.00 33.67 O
ATOM 9 C3' A B2453 59.257 137.914 103.295 1.00 33.13 C
ATOM 10 O3' A B2453 59.860 139.162 103.536 1.00 34.76 O
ATOM 11 C2' A B2453 58.081 138.064 102.338 1.00 34.46 C
ATOM 12 O2' A B2453 58.263 138.998 101.299 1.00 36.33 O
ATOM 13 C1' A B2453 58.025 136.678 101.711 1.00 32.76 C
ATOM 14 N9 A B2453 57.057 135.902 102.453 1.00 30.67 N
ATOM 15 C8 A B2453 57.238 135.139 103.568 1.00 31.57 C
ATOM 16 N7 A B2453 56.144 134.584 104.006 1.00 31.69 N
ATOM 17 C5 A B2453 55.182 135.005 103.109 1.00 31.44 C
ATOM 18 C6 A B2453 53.820 134.748 103.015 1.00 31.79 C
ATOM 19 N6 A B2453 53.177 133.965 103.870 1.00 29.58 N
ATOM 20 N1 A B2453 53.134 135.331 102.000 1.00 33.27 N
ATOM 21 C2 A B2453 53.807 136.127 101.153 1.00 33.07 C
ATOM 22 N3 A B2453 55.096 136.437 101.144 1.00 31.85 N
ATOM 23 C4 A B2453 55.732 135.829 102.156 1.00 30.68 C
ATOM 24 P G B2454 60.136 139.633 105.033 1.00 34.98 P
ATOM 25 OP1 G B2454 58.852 139.666 105.757 1.00 34.66 O
ATOM 26 OP2 G B2454 60.950 140.856 104.934 1.00 34.16 O
ATOM 27 O5' G B2454 61.011 138.445 105.626 1.00 36.62 O
TER
Atoms:
OP1: (53.207,126.671,104.620)
OP2: (53.740,129.164,104.631)
C3': (49.339,128.036,101.892)
C1': (48.264,129.973,102.706)
C5': (50.344,127.422,104.185)
O4': (48.840,129.273,103.799)
C8: (50.278,131.516,102.933)
O2': (46.973,128.369,101.509)
C6: (49.477,134.427,101.150)
C5: (49.651,133.211,101.826)
C4: (48.620,132.297,101.745)
P: (52.785,128.061,104.878)
C4': (49.163,127.923,103.394)
C2': (48.237,129.016,101.514)
C2: (47.403,133.634,100.504)
N1: (48.311,134.615,100.493)
N3: (47.457,132.451,101.090)
N6: (50.399,135.393,101.105)
N7: (50.692,132.706,102.580)
N9: (49.030,131.205,102.472)
O5': (51.442,128.321,104.070)
O3': (49.137,126.789,101.265)
OP2: (53.740,129.164,104.631)
C3': (49.339,128.036,101.892)
C1': (48.264,129.973,102.706)
C5': (50.344,127.422,104.185)
O4': (48.840,129.273,103.799)
C8: (50.278,131.516,102.933)
O2': (46.973,128.369,101.509)
C6: (49.477,134.427,101.150)
C5: (49.651,133.211,101.826)
C4: (48.620,132.297,101.745)
P: (52.785,128.061,104.878)
C4': (49.163,127.923,103.394)
C2': (48.237,129.016,101.514)
C2: (47.403,133.634,100.504)
N1: (48.311,134.615,100.493)
N3: (47.457,132.451,101.090)
N6: (50.399,135.393,101.105)
N7: (50.692,132.706,102.580)
N9: (49.030,131.205,102.472)
O5': (51.442,128.321,104.070)
O3': (49.137,126.789,101.265)
OP1: (60.878,134.061,106.321)
OP2: (61.424,133.338,103.954)
C3': (59.257,137.914,103.295)
C1': (58.025,136.678,101.711)
C5': (61.283,136.333,103.268)
O4': (59.298,136.081,101.867)
C8: (57.238,135.139,103.568)
O2': (58.263,138.998,101.299)
C6: (53.820,134.748,103.015)
C5: (55.182,135.005,103.109)
C4: (55.732,135.829,102.156)
P: (61.438,134.360,105.008)
C4': (60.189,137.032,102.495)
C2': (58.081,138.064,102.338)
C2: (53.807,136.127,101.153)
N1: (53.134,135.331,102.000)
N3: (55.096,136.437,101.144)
N6: (53.177,133.965,103.870)
N7: (56.144,134.584,104.006)
N9: (57.057,135.902,102.453)
O5': (60.754,135.675,104.433)
O3': (59.860,139.162,103.536)
OP2: (61.424,133.338,103.954)
C3': (59.257,137.914,103.295)
C1': (58.025,136.678,101.711)
C5': (61.283,136.333,103.268)
O4': (59.298,136.081,101.867)
C8: (57.238,135.139,103.568)
O2': (58.263,138.998,101.299)
C6: (53.820,134.748,103.015)
C5: (55.182,135.005,103.109)
C4: (55.732,135.829,102.156)
P: (61.438,134.360,105.008)
C4': (60.189,137.032,102.495)
C2': (58.081,138.064,102.338)
C2: (53.807,136.127,101.153)
N1: (53.134,135.331,102.000)
N3: (55.096,136.437,101.144)
N6: (53.177,133.965,103.870)
N7: (56.144,134.584,104.006)
N9: (57.057,135.902,102.453)
O5': (60.754,135.675,104.433)
O3': (59.860,139.162,103.536)
Image (generated by PyMOL):