Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.303 54.640 55.050 1.00 69.07 O
ATOM 2 P U A 701 3.860 54.995 55.661 1.00 70.02 P
ATOM 3 OP1 U A 701 2.858 54.179 54.925 1.00 71.31 O
ATOM 4 OP2 U A 701 3.718 56.474 55.703 1.00 69.15 O
ATOM 5 O5' U A 701 3.960 54.476 57.163 1.00 69.48 O
ATOM 6 C5' U A 701 2.806 54.435 58.020 1.00 68.09 C
ATOM 7 C4' U A 701 2.865 53.207 58.901 1.00 66.91 C
ATOM 8 O4' U A 701 2.818 52.028 58.048 1.00 65.55 O
ATOM 9 C3' U A 701 4.126 53.064 59.754 1.00 66.44 C
ATOM 10 O3' U A 701 3.810 52.394 60.974 1.00 66.84 O
ATOM 11 C2' U A 701 5.012 52.179 58.881 1.00 65.85 C
ATOM 12 O2' U A 701 5.971 51.447 59.615 1.00 64.56 O
ATOM 13 C1' U A 701 3.977 51.246 58.255 1.00 65.34 C
ATOM 14 N1 U A 701 4.382 50.653 56.970 1.00 65.39 N
ATOM 15 C2 U A 701 4.576 49.280 56.929 1.00 65.67 C
ATOM 16 O2 U A 701 4.403 48.554 57.891 1.00 67.35 O
ATOM 17 N3 U A 701 4.978 48.787 55.715 1.00 64.31 N
ATOM 18 C4 U A 701 5.195 49.501 54.560 1.00 63.87 C
ATOM 19 O4 U A 701 5.563 48.908 53.549 1.00 64.62 O
ATOM 20 C5 U A 701 4.957 50.908 54.671 1.00 63.61 C
ATOM 21 C6 U A 701 4.570 51.424 55.843 1.00 65.05 C
ATOM 22 P U A 702 3.504 53.249 62.301 1.00 66.86 P
ATOM 23 OP1 U A 702 3.076 52.326 63.375 1.00 69.40 O
ATOM 24 OP2 U A 702 2.611 54.369 61.905 1.00 67.16 O
ATOM 25 O5' U A 702 4.919 53.854 62.723 1.00 70.81 O
TER
ATOM 1 O3' G B 699 8.233 59.179 52.533 1.00 60.85 O
ATOM 2 P C B 700 6.837 58.972 53.301 1.00 63.65 P
ATOM 3 OP1 C B 700 5.844 58.663 52.244 1.00 65.49 O
ATOM 4 OP2 C B 700 6.583 60.098 54.236 1.00 60.63 O
ATOM 5 O5' C B 700 7.092 57.665 54.174 1.00 64.52 O
ATOM 6 C5' C B 700 7.483 56.429 53.548 1.00 65.44 C
ATOM 7 C4' C B 700 7.599 55.334 54.578 1.00 66.79 C
ATOM 8 O4' C B 700 8.777 55.537 55.404 1.00 66.46 O
ATOM 9 C3' C B 700 6.464 55.265 55.584 1.00 67.58 C
ATOM 10 O3' C B 700 5.303 54.640 55.050 1.00 69.07 O
ATOM 11 C2' C B 700 7.096 54.484 56.730 1.00 66.71 C
ATOM 12 O2' C B 700 7.119 53.087 56.510 1.00 64.97 O
ATOM 13 C1' C B 700 8.527 55.034 56.710 1.00 66.11 C
ATOM 14 N1 C B 700 8.754 56.109 57.699 1.00 64.69 N
ATOM 15 C2 C B 700 9.315 55.771 58.941 1.00 62.87 C
ATOM 16 O2 C B 700 9.611 54.591 59.164 1.00 61.23 O
ATOM 17 N3 C B 700 9.518 56.739 59.862 1.00 62.57 N
ATOM 18 C4 C B 700 9.184 58.001 59.586 1.00 62.93 C
ATOM 19 N4 C B 700 9.391 58.922 60.531 1.00 62.37 N
ATOM 20 C5 C B 700 8.617 58.376 58.331 1.00 62.73 C
ATOM 21 C6 C B 700 8.422 57.409 57.426 1.00 63.53 C
ATOM 22 P U B 701 3.860 54.995 55.661 1.00 70.02 P
ATOM 23 OP1 U B 701 2.858 54.179 54.925 1.00 71.31 O
ATOM 24 OP2 U B 701 3.718 56.474 55.703 1.00 69.15 O
ATOM 25 O5' U B 701 3.960 54.476 57.163 1.00 69.48 O
TER
ATOM 2 P U A 701 3.860 54.995 55.661 1.00 70.02 P
ATOM 3 OP1 U A 701 2.858 54.179 54.925 1.00 71.31 O
ATOM 4 OP2 U A 701 3.718 56.474 55.703 1.00 69.15 O
ATOM 5 O5' U A 701 3.960 54.476 57.163 1.00 69.48 O
ATOM 6 C5' U A 701 2.806 54.435 58.020 1.00 68.09 C
ATOM 7 C4' U A 701 2.865 53.207 58.901 1.00 66.91 C
ATOM 8 O4' U A 701 2.818 52.028 58.048 1.00 65.55 O
ATOM 9 C3' U A 701 4.126 53.064 59.754 1.00 66.44 C
ATOM 10 O3' U A 701 3.810 52.394 60.974 1.00 66.84 O
ATOM 11 C2' U A 701 5.012 52.179 58.881 1.00 65.85 C
ATOM 12 O2' U A 701 5.971 51.447 59.615 1.00 64.56 O
ATOM 13 C1' U A 701 3.977 51.246 58.255 1.00 65.34 C
ATOM 14 N1 U A 701 4.382 50.653 56.970 1.00 65.39 N
ATOM 15 C2 U A 701 4.576 49.280 56.929 1.00 65.67 C
ATOM 16 O2 U A 701 4.403 48.554 57.891 1.00 67.35 O
ATOM 17 N3 U A 701 4.978 48.787 55.715 1.00 64.31 N
ATOM 18 C4 U A 701 5.195 49.501 54.560 1.00 63.87 C
ATOM 19 O4 U A 701 5.563 48.908 53.549 1.00 64.62 O
ATOM 20 C5 U A 701 4.957 50.908 54.671 1.00 63.61 C
ATOM 21 C6 U A 701 4.570 51.424 55.843 1.00 65.05 C
ATOM 22 P U A 702 3.504 53.249 62.301 1.00 66.86 P
ATOM 23 OP1 U A 702 3.076 52.326 63.375 1.00 69.40 O
ATOM 24 OP2 U A 702 2.611 54.369 61.905 1.00 67.16 O
ATOM 25 O5' U A 702 4.919 53.854 62.723 1.00 70.81 O
TER
ATOM 1 O3' G B 699 8.233 59.179 52.533 1.00 60.85 O
ATOM 2 P C B 700 6.837 58.972 53.301 1.00 63.65 P
ATOM 3 OP1 C B 700 5.844 58.663 52.244 1.00 65.49 O
ATOM 4 OP2 C B 700 6.583 60.098 54.236 1.00 60.63 O
ATOM 5 O5' C B 700 7.092 57.665 54.174 1.00 64.52 O
ATOM 6 C5' C B 700 7.483 56.429 53.548 1.00 65.44 C
ATOM 7 C4' C B 700 7.599 55.334 54.578 1.00 66.79 C
ATOM 8 O4' C B 700 8.777 55.537 55.404 1.00 66.46 O
ATOM 9 C3' C B 700 6.464 55.265 55.584 1.00 67.58 C
ATOM 10 O3' C B 700 5.303 54.640 55.050 1.00 69.07 O
ATOM 11 C2' C B 700 7.096 54.484 56.730 1.00 66.71 C
ATOM 12 O2' C B 700 7.119 53.087 56.510 1.00 64.97 O
ATOM 13 C1' C B 700 8.527 55.034 56.710 1.00 66.11 C
ATOM 14 N1 C B 700 8.754 56.109 57.699 1.00 64.69 N
ATOM 15 C2 C B 700 9.315 55.771 58.941 1.00 62.87 C
ATOM 16 O2 C B 700 9.611 54.591 59.164 1.00 61.23 O
ATOM 17 N3 C B 700 9.518 56.739 59.862 1.00 62.57 N
ATOM 18 C4 C B 700 9.184 58.001 59.586 1.00 62.93 C
ATOM 19 N4 C B 700 9.391 58.922 60.531 1.00 62.37 N
ATOM 20 C5 C B 700 8.617 58.376 58.331 1.00 62.73 C
ATOM 21 C6 C B 700 8.422 57.409 57.426 1.00 63.53 C
ATOM 22 P U B 701 3.860 54.995 55.661 1.00 70.02 P
ATOM 23 OP1 U B 701 2.858 54.179 54.925 1.00 71.31 O
ATOM 24 OP2 U B 701 3.718 56.474 55.703 1.00 69.15 O
ATOM 25 O5' U B 701 3.960 54.476 57.163 1.00 69.48 O
TER
Atoms:
C4: (5.195,49.501,54.560)
N3: (4.978,48.787,55.715)
OP1: (2.858,54.179,54.925)
OP2: (3.718,56.474,55.703)
C2: (4.576,49.280,56.929)
C1': (3.977,51.246,58.255)
C3': (4.126,53.064,59.754)
O5': (3.960,54.476,57.163)
O4': (2.818,52.028,58.048)
C5': (2.806,54.435,58.020)
P: (3.860,54.995,55.661)
C4': (2.865,53.207,58.901)
C2': (5.012,52.179,58.881)
O2': (5.971,51.447,59.615)
N1: (4.382,50.653,56.970)
O4: (5.563,48.908,53.549)
O2: (4.403,48.554,57.891)
C6: (4.570,51.424,55.843)
C5: (4.957,50.908,54.671)
O3': (3.810,52.394,60.974)
N3: (4.978,48.787,55.715)
OP1: (2.858,54.179,54.925)
OP2: (3.718,56.474,55.703)
C2: (4.576,49.280,56.929)
C1': (3.977,51.246,58.255)
C3': (4.126,53.064,59.754)
O5': (3.960,54.476,57.163)
O4': (2.818,52.028,58.048)
C5': (2.806,54.435,58.020)
P: (3.860,54.995,55.661)
C4': (2.865,53.207,58.901)
C2': (5.012,52.179,58.881)
O2': (5.971,51.447,59.615)
N1: (4.382,50.653,56.970)
O4: (5.563,48.908,53.549)
O2: (4.403,48.554,57.891)
C6: (4.570,51.424,55.843)
C5: (4.957,50.908,54.671)
O3': (3.810,52.394,60.974)
C2: (9.315,55.771,58.941)
OP1: (5.844,58.663,52.244)
OP2: (6.583,60.098,54.236)
C4: (9.184,58.001,59.586)
O5': (7.092,57.665,54.174)
C3': (6.464,55.265,55.584)
C1': (8.527,55.034,56.710)
O4': (8.777,55.537,55.404)
C5': (7.483,56.429,53.548)
P: (6.837,58.972,53.301)
O2: (9.611,54.591,59.164)
C4': (7.599,55.334,54.578)
C2': (7.096,54.484,56.730)
O2': (7.119,53.087,56.510)
N1: (8.754,56.109,57.699)
N3: (9.518,56.739,59.862)
N4: (9.391,58.922,60.531)
C6: (8.422,57.409,57.426)
C5: (8.617,58.376,58.331)
O3': (5.303,54.640,55.050)
OP1: (5.844,58.663,52.244)
OP2: (6.583,60.098,54.236)
C4: (9.184,58.001,59.586)
O5': (7.092,57.665,54.174)
C3': (6.464,55.265,55.584)
C1': (8.527,55.034,56.710)
O4': (8.777,55.537,55.404)
C5': (7.483,56.429,53.548)
P: (6.837,58.972,53.301)
O2: (9.611,54.591,59.164)
C4': (7.599,55.334,54.578)
C2': (7.096,54.484,56.730)
O2': (7.119,53.087,56.510)
N1: (8.754,56.109,57.699)
N3: (9.518,56.739,59.862)
N4: (9.391,58.922,60.531)
C6: (8.422,57.409,57.426)
C5: (8.617,58.376,58.331)
O3': (5.303,54.640,55.050)
Image (generated by PyMOL):