Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.339 54.505 55.017 1.00 59.84 O
ATOM 2 P U A 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 3 OP1 U A 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 4 OP2 U A 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 5 O5' U A 701 3.941 54.092 57.049 1.00 59.70 O
ATOM 6 C5' U A 701 2.834 54.149 57.958 1.00 59.75 C
ATOM 7 C4' U A 701 2.892 52.973 58.900 1.00 59.44 C
ATOM 8 O4' U A 701 2.839 51.764 58.095 1.00 59.24 O
ATOM 9 C3' U A 701 4.164 52.865 59.742 1.00 59.11 C
ATOM 10 O3' U A 701 3.862 52.254 60.991 1.00 60.57 O
ATOM 11 C2' U A 701 5.045 51.951 58.899 1.00 58.20 C
ATOM 12 O2' U A 701 5.996 51.234 59.655 1.00 57.77 O
ATOM 13 C1' U A 701 4.011 51.003 58.297 1.00 58.12 C
ATOM 14 N1 U A 701 4.417 50.439 57.002 1.00 58.33 N
ATOM 15 C2 U A 701 4.604 49.069 56.925 1.00 58.77 C
ATOM 16 O2 U A 701 4.411 48.317 57.864 1.00 59.84 O
ATOM 17 N3 U A 701 5.017 48.611 55.698 1.00 58.38 N
ATOM 18 C4 U A 701 5.243 49.360 54.566 1.00 56.54 C
ATOM 19 O4 U A 701 5.633 48.803 53.543 1.00 55.48 O
ATOM 20 C5 U A 701 5.008 50.761 54.719 1.00 57.42 C
ATOM 21 C6 U A 701 4.614 51.242 55.901 1.00 57.59 C
ATOM 22 P U A 702 3.561 53.173 62.275 1.00 61.34 P
ATOM 23 OP1 U A 702 3.102 52.292 63.369 1.00 64.24 O
ATOM 24 OP2 U A 702 2.692 54.296 61.832 1.00 61.58 O
ATOM 25 O5' U A 702 4.983 53.765 62.681 1.00 63.23 O
TER
ATOM 1 O3' G B 699 8.266 58.970 52.440 1.00 50.03 O
ATOM 2 P C B 700 6.835 58.773 53.140 1.00 54.15 P
ATOM 3 OP1 C B 700 5.904 58.434 52.031 1.00 54.56 O
ATOM 4 OP2 C B 700 6.521 59.916 54.041 1.00 50.51 O
ATOM 5 O5' C B 700 7.054 57.482 54.045 1.00 54.30 O
ATOM 6 C5' C B 700 7.497 56.251 53.455 1.00 56.57 C
ATOM 7 C4' C B 700 7.632 55.183 54.507 1.00 58.67 C
ATOM 8 O4' C B 700 8.816 55.409 55.314 1.00 58.61 O
ATOM 9 C3' C B 700 6.517 55.110 55.534 1.00 59.47 C
ATOM 10 O3' C B 700 5.339 54.505 55.017 1.00 59.84 O
ATOM 11 C2' C B 700 7.179 54.306 56.646 1.00 59.81 C
ATOM 12 O2' C B 700 7.238 52.918 56.383 1.00 59.36 O
ATOM 13 C1' C B 700 8.599 54.883 56.616 1.00 59.72 C
ATOM 14 N1 C B 700 8.794 55.954 57.614 1.00 59.10 N
ATOM 15 C2 C B 700 9.361 55.619 58.852 1.00 58.53 C
ATOM 16 O2 C B 700 9.709 54.448 59.056 1.00 60.14 O
ATOM 17 N3 C B 700 9.517 56.575 59.790 1.00 57.53 N
ATOM 18 C4 C B 700 9.140 57.826 59.532 1.00 57.38 C
ATOM 19 N4 C B 700 9.307 58.733 60.494 1.00 57.16 N
ATOM 20 C5 C B 700 8.573 58.203 58.277 1.00 57.40 C
ATOM 21 C6 C B 700 8.421 57.245 57.355 1.00 58.01 C
ATOM 22 P U B 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 23 OP1 U B 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 24 OP2 U B 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 25 O5' U B 701 3.941 54.092 57.049 1.00 59.70 O
TER
ATOM 2 P U A 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 3 OP1 U A 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 4 OP2 U A 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 5 O5' U A 701 3.941 54.092 57.049 1.00 59.70 O
ATOM 6 C5' U A 701 2.834 54.149 57.958 1.00 59.75 C
ATOM 7 C4' U A 701 2.892 52.973 58.900 1.00 59.44 C
ATOM 8 O4' U A 701 2.839 51.764 58.095 1.00 59.24 O
ATOM 9 C3' U A 701 4.164 52.865 59.742 1.00 59.11 C
ATOM 10 O3' U A 701 3.862 52.254 60.991 1.00 60.57 O
ATOM 11 C2' U A 701 5.045 51.951 58.899 1.00 58.20 C
ATOM 12 O2' U A 701 5.996 51.234 59.655 1.00 57.77 O
ATOM 13 C1' U A 701 4.011 51.003 58.297 1.00 58.12 C
ATOM 14 N1 U A 701 4.417 50.439 57.002 1.00 58.33 N
ATOM 15 C2 U A 701 4.604 49.069 56.925 1.00 58.77 C
ATOM 16 O2 U A 701 4.411 48.317 57.864 1.00 59.84 O
ATOM 17 N3 U A 701 5.017 48.611 55.698 1.00 58.38 N
ATOM 18 C4 U A 701 5.243 49.360 54.566 1.00 56.54 C
ATOM 19 O4 U A 701 5.633 48.803 53.543 1.00 55.48 O
ATOM 20 C5 U A 701 5.008 50.761 54.719 1.00 57.42 C
ATOM 21 C6 U A 701 4.614 51.242 55.901 1.00 57.59 C
ATOM 22 P U A 702 3.561 53.173 62.275 1.00 61.34 P
ATOM 23 OP1 U A 702 3.102 52.292 63.369 1.00 64.24 O
ATOM 24 OP2 U A 702 2.692 54.296 61.832 1.00 61.58 O
ATOM 25 O5' U A 702 4.983 53.765 62.681 1.00 63.23 O
TER
ATOM 1 O3' G B 699 8.266 58.970 52.440 1.00 50.03 O
ATOM 2 P C B 700 6.835 58.773 53.140 1.00 54.15 P
ATOM 3 OP1 C B 700 5.904 58.434 52.031 1.00 54.56 O
ATOM 4 OP2 C B 700 6.521 59.916 54.041 1.00 50.51 O
ATOM 5 O5' C B 700 7.054 57.482 54.045 1.00 54.30 O
ATOM 6 C5' C B 700 7.497 56.251 53.455 1.00 56.57 C
ATOM 7 C4' C B 700 7.632 55.183 54.507 1.00 58.67 C
ATOM 8 O4' C B 700 8.816 55.409 55.314 1.00 58.61 O
ATOM 9 C3' C B 700 6.517 55.110 55.534 1.00 59.47 C
ATOM 10 O3' C B 700 5.339 54.505 55.017 1.00 59.84 O
ATOM 11 C2' C B 700 7.179 54.306 56.646 1.00 59.81 C
ATOM 12 O2' C B 700 7.238 52.918 56.383 1.00 59.36 O
ATOM 13 C1' C B 700 8.599 54.883 56.616 1.00 59.72 C
ATOM 14 N1 C B 700 8.794 55.954 57.614 1.00 59.10 N
ATOM 15 C2 C B 700 9.361 55.619 58.852 1.00 58.53 C
ATOM 16 O2 C B 700 9.709 54.448 59.056 1.00 60.14 O
ATOM 17 N3 C B 700 9.517 56.575 59.790 1.00 57.53 N
ATOM 18 C4 C B 700 9.140 57.826 59.532 1.00 57.38 C
ATOM 19 N4 C B 700 9.307 58.733 60.494 1.00 57.16 N
ATOM 20 C5 C B 700 8.573 58.203 58.277 1.00 57.40 C
ATOM 21 C6 C B 700 8.421 57.245 57.355 1.00 58.01 C
ATOM 22 P U B 701 3.913 54.869 55.663 1.00 60.50 P
ATOM 23 OP1 U B 701 2.864 54.279 54.799 1.00 61.18 O
ATOM 24 OP2 U B 701 3.876 56.324 55.974 1.00 61.18 O
ATOM 25 O5' U B 701 3.941 54.092 57.049 1.00 59.70 O
TER
Atoms:
C4: (5.243,49.360,54.566)
N3: (5.017,48.611,55.698)
OP1: (2.864,54.279,54.799)
OP2: (3.876,56.324,55.974)
C2: (4.604,49.069,56.925)
C1': (4.011,51.003,58.297)
C3': (4.164,52.865,59.742)
O5': (3.941,54.092,57.049)
O4': (2.839,51.764,58.095)
C5': (2.834,54.149,57.958)
P: (3.913,54.869,55.663)
C4': (2.892,52.973,58.900)
C2': (5.045,51.951,58.899)
O2': (5.996,51.234,59.655)
N1: (4.417,50.439,57.002)
O4: (5.633,48.803,53.543)
O2: (4.411,48.317,57.864)
C6: (4.614,51.242,55.901)
C5: (5.008,50.761,54.719)
O3': (3.862,52.254,60.991)
N3: (5.017,48.611,55.698)
OP1: (2.864,54.279,54.799)
OP2: (3.876,56.324,55.974)
C2: (4.604,49.069,56.925)
C1': (4.011,51.003,58.297)
C3': (4.164,52.865,59.742)
O5': (3.941,54.092,57.049)
O4': (2.839,51.764,58.095)
C5': (2.834,54.149,57.958)
P: (3.913,54.869,55.663)
C4': (2.892,52.973,58.900)
C2': (5.045,51.951,58.899)
O2': (5.996,51.234,59.655)
N1: (4.417,50.439,57.002)
O4: (5.633,48.803,53.543)
O2: (4.411,48.317,57.864)
C6: (4.614,51.242,55.901)
C5: (5.008,50.761,54.719)
O3': (3.862,52.254,60.991)
C2: (9.361,55.619,58.852)
OP1: (5.904,58.434,52.031)
OP2: (6.521,59.916,54.041)
C4: (9.140,57.826,59.532)
O5': (7.054,57.482,54.045)
C3': (6.517,55.110,55.534)
C1': (8.599,54.883,56.616)
O4': (8.816,55.409,55.314)
C5': (7.497,56.251,53.455)
P: (6.835,58.773,53.140)
O2: (9.709,54.448,59.056)
C4': (7.632,55.183,54.507)
C2': (7.179,54.306,56.646)
O2': (7.238,52.918,56.383)
N1: (8.794,55.954,57.614)
N3: (9.517,56.575,59.790)
N4: (9.307,58.733,60.494)
C6: (8.421,57.245,57.355)
C5: (8.573,58.203,58.277)
O3': (5.339,54.505,55.017)
OP1: (5.904,58.434,52.031)
OP2: (6.521,59.916,54.041)
C4: (9.140,57.826,59.532)
O5': (7.054,57.482,54.045)
C3': (6.517,55.110,55.534)
C1': (8.599,54.883,56.616)
O4': (8.816,55.409,55.314)
C5': (7.497,56.251,53.455)
P: (6.835,58.773,53.140)
O2: (9.709,54.448,59.056)
C4': (7.632,55.183,54.507)
C2': (7.179,54.306,56.646)
O2': (7.238,52.918,56.383)
N1: (8.794,55.954,57.614)
N3: (9.517,56.575,59.790)
N4: (9.307,58.733,60.494)
C6: (8.421,57.245,57.355)
C5: (8.573,58.203,58.277)
O3': (5.339,54.505,55.017)
Image (generated by PyMOL):