Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.619 54.620 54.992 1.00 76.60 O
ATOM 2 P U A 701 4.179 55.014 55.594 1.00 78.51 P
ATOM 3 OP1 U A 701 3.138 54.345 54.773 1.00 78.72 O
ATOM 4 OP2 U A 701 4.130 56.489 55.778 1.00 77.91 O
ATOM 5 O5' U A 701 4.194 54.350 57.040 1.00 78.12 O
ATOM 6 C5' U A 701 3.009 54.297 57.853 1.00 78.21 C
ATOM 7 C4' U A 701 3.095 53.126 58.807 1.00 79.12 C
ATOM 8 O4' U A 701 3.067 51.892 58.038 1.00 78.78 O
ATOM 9 C3' U A 701 4.359 53.065 59.661 1.00 79.16 C
ATOM 10 O3' U A 701 4.054 52.471 60.919 1.00 80.52 O
ATOM 11 C2' U A 701 5.271 52.159 58.838 1.00 78.39 C
ATOM 12 O2' U A 701 6.259 51.506 59.611 1.00 76.64 O
ATOM 13 C1' U A 701 4.266 51.169 58.244 1.00 78.46 C
ATOM 14 N1 U A 701 4.675 50.599 56.948 1.00 79.15 N
ATOM 15 C2 U A 701 4.726 49.215 56.825 1.00 79.36 C
ATOM 16 O2 U A 701 4.432 48.452 57.732 1.00 79.97 O
ATOM 17 N3 U A 701 5.131 48.758 55.593 1.00 78.52 N
ATOM 18 C4 U A 701 5.478 49.520 54.494 1.00 77.82 C
ATOM 19 O4 U A 701 5.852 48.961 53.463 1.00 77.14 O
ATOM 20 C5 U A 701 5.390 50.932 54.695 1.00 78.19 C
ATOM 21 C6 U A 701 5.003 51.412 55.881 1.00 79.08 C
ATOM 22 P U A 702 3.698 53.408 62.179 1.00 81.89 P
ATOM 23 OP1 U A 702 3.194 52.532 63.265 1.00 83.11 O
ATOM 24 OP2 U A 702 2.846 54.530 61.689 1.00 80.11 O
ATOM 25 O5' U A 702 5.106 54.001 62.640 1.00 83.15 O
TER
ATOM 1 O3' G B 699 8.564 59.153 52.395 1.00 67.17 O
ATOM 2 P C B 700 7.126 58.930 53.079 1.00 68.65 P
ATOM 3 OP1 C B 700 6.204 58.574 51.969 1.00 69.77 O
ATOM 4 OP2 C B 700 6.790 60.074 53.969 1.00 66.36 O
ATOM 5 O5' C B 700 7.357 57.645 53.993 1.00 69.85 O
ATOM 6 C5' C B 700 7.783 56.400 53.409 1.00 71.67 C
ATOM 7 C4' C B 700 7.913 55.334 54.470 1.00 73.87 C
ATOM 8 O4' C B 700 9.101 55.560 55.275 1.00 73.17 O
ATOM 9 C3' C B 700 6.789 55.260 55.492 1.00 75.04 C
ATOM 10 O3' C B 700 5.619 54.620 54.992 1.00 76.60 O
ATOM 11 C2' C B 700 7.453 54.493 56.628 1.00 74.58 C
ATOM 12 O2' C B 700 7.504 53.096 56.403 1.00 73.28 O
ATOM 13 C1' C B 700 8.867 55.089 56.597 1.00 73.62 C
ATOM 14 N1 C B 700 9.005 56.218 57.540 1.00 73.08 N
ATOM 15 C2 C B 700 9.584 55.978 58.795 1.00 72.42 C
ATOM 16 O2 C B 700 10.020 54.849 59.049 1.00 73.11 O
ATOM 17 N3 C B 700 9.659 56.985 59.694 1.00 71.70 N
ATOM 18 C4 C B 700 9.200 58.198 59.376 1.00 72.05 C
ATOM 19 N4 C B 700 9.286 59.160 60.299 1.00 70.49 N
ATOM 20 C5 C B 700 8.631 58.479 58.096 1.00 72.00 C
ATOM 21 C6 C B 700 8.556 57.471 57.217 1.00 72.40 C
ATOM 22 P U B 701 4.179 55.014 55.594 1.00 78.51 P
ATOM 23 OP1 U B 701 3.138 54.345 54.773 1.00 78.72 O
ATOM 24 OP2 U B 701 4.130 56.489 55.778 1.00 77.91 O
ATOM 25 O5' U B 701 4.194 54.350 57.040 1.00 78.12 O
TER
ATOM 2 P U A 701 4.179 55.014 55.594 1.00 78.51 P
ATOM 3 OP1 U A 701 3.138 54.345 54.773 1.00 78.72 O
ATOM 4 OP2 U A 701 4.130 56.489 55.778 1.00 77.91 O
ATOM 5 O5' U A 701 4.194 54.350 57.040 1.00 78.12 O
ATOM 6 C5' U A 701 3.009 54.297 57.853 1.00 78.21 C
ATOM 7 C4' U A 701 3.095 53.126 58.807 1.00 79.12 C
ATOM 8 O4' U A 701 3.067 51.892 58.038 1.00 78.78 O
ATOM 9 C3' U A 701 4.359 53.065 59.661 1.00 79.16 C
ATOM 10 O3' U A 701 4.054 52.471 60.919 1.00 80.52 O
ATOM 11 C2' U A 701 5.271 52.159 58.838 1.00 78.39 C
ATOM 12 O2' U A 701 6.259 51.506 59.611 1.00 76.64 O
ATOM 13 C1' U A 701 4.266 51.169 58.244 1.00 78.46 C
ATOM 14 N1 U A 701 4.675 50.599 56.948 1.00 79.15 N
ATOM 15 C2 U A 701 4.726 49.215 56.825 1.00 79.36 C
ATOM 16 O2 U A 701 4.432 48.452 57.732 1.00 79.97 O
ATOM 17 N3 U A 701 5.131 48.758 55.593 1.00 78.52 N
ATOM 18 C4 U A 701 5.478 49.520 54.494 1.00 77.82 C
ATOM 19 O4 U A 701 5.852 48.961 53.463 1.00 77.14 O
ATOM 20 C5 U A 701 5.390 50.932 54.695 1.00 78.19 C
ATOM 21 C6 U A 701 5.003 51.412 55.881 1.00 79.08 C
ATOM 22 P U A 702 3.698 53.408 62.179 1.00 81.89 P
ATOM 23 OP1 U A 702 3.194 52.532 63.265 1.00 83.11 O
ATOM 24 OP2 U A 702 2.846 54.530 61.689 1.00 80.11 O
ATOM 25 O5' U A 702 5.106 54.001 62.640 1.00 83.15 O
TER
ATOM 1 O3' G B 699 8.564 59.153 52.395 1.00 67.17 O
ATOM 2 P C B 700 7.126 58.930 53.079 1.00 68.65 P
ATOM 3 OP1 C B 700 6.204 58.574 51.969 1.00 69.77 O
ATOM 4 OP2 C B 700 6.790 60.074 53.969 1.00 66.36 O
ATOM 5 O5' C B 700 7.357 57.645 53.993 1.00 69.85 O
ATOM 6 C5' C B 700 7.783 56.400 53.409 1.00 71.67 C
ATOM 7 C4' C B 700 7.913 55.334 54.470 1.00 73.87 C
ATOM 8 O4' C B 700 9.101 55.560 55.275 1.00 73.17 O
ATOM 9 C3' C B 700 6.789 55.260 55.492 1.00 75.04 C
ATOM 10 O3' C B 700 5.619 54.620 54.992 1.00 76.60 O
ATOM 11 C2' C B 700 7.453 54.493 56.628 1.00 74.58 C
ATOM 12 O2' C B 700 7.504 53.096 56.403 1.00 73.28 O
ATOM 13 C1' C B 700 8.867 55.089 56.597 1.00 73.62 C
ATOM 14 N1 C B 700 9.005 56.218 57.540 1.00 73.08 N
ATOM 15 C2 C B 700 9.584 55.978 58.795 1.00 72.42 C
ATOM 16 O2 C B 700 10.020 54.849 59.049 1.00 73.11 O
ATOM 17 N3 C B 700 9.659 56.985 59.694 1.00 71.70 N
ATOM 18 C4 C B 700 9.200 58.198 59.376 1.00 72.05 C
ATOM 19 N4 C B 700 9.286 59.160 60.299 1.00 70.49 N
ATOM 20 C5 C B 700 8.631 58.479 58.096 1.00 72.00 C
ATOM 21 C6 C B 700 8.556 57.471 57.217 1.00 72.40 C
ATOM 22 P U B 701 4.179 55.014 55.594 1.00 78.51 P
ATOM 23 OP1 U B 701 3.138 54.345 54.773 1.00 78.72 O
ATOM 24 OP2 U B 701 4.130 56.489 55.778 1.00 77.91 O
ATOM 25 O5' U B 701 4.194 54.350 57.040 1.00 78.12 O
TER
Atoms:
C4: (5.478,49.520,54.494)
N3: (5.131,48.758,55.593)
OP1: (3.138,54.345,54.773)
OP2: (4.130,56.489,55.778)
C2: (4.726,49.215,56.825)
C1': (4.266,51.169,58.244)
C3': (4.359,53.065,59.661)
O5': (4.194,54.350,57.040)
O4': (3.067,51.892,58.038)
C5': (3.009,54.297,57.853)
P: (4.179,55.014,55.594)
C4': (3.095,53.126,58.807)
C2': (5.271,52.159,58.838)
O2': (6.259,51.506,59.611)
N1: (4.675,50.599,56.948)
O4: (5.852,48.961,53.463)
O2: (4.432,48.452,57.732)
C6: (5.003,51.412,55.881)
C5: (5.390,50.932,54.695)
O3': (4.054,52.471,60.919)
N3: (5.131,48.758,55.593)
OP1: (3.138,54.345,54.773)
OP2: (4.130,56.489,55.778)
C2: (4.726,49.215,56.825)
C1': (4.266,51.169,58.244)
C3': (4.359,53.065,59.661)
O5': (4.194,54.350,57.040)
O4': (3.067,51.892,58.038)
C5': (3.009,54.297,57.853)
P: (4.179,55.014,55.594)
C4': (3.095,53.126,58.807)
C2': (5.271,52.159,58.838)
O2': (6.259,51.506,59.611)
N1: (4.675,50.599,56.948)
O4: (5.852,48.961,53.463)
O2: (4.432,48.452,57.732)
C6: (5.003,51.412,55.881)
C5: (5.390,50.932,54.695)
O3': (4.054,52.471,60.919)
C2: (9.584,55.978,58.795)
OP1: (6.204,58.574,51.969)
OP2: (6.790,60.074,53.969)
C4: (9.200,58.198,59.376)
O5': (7.357,57.645,53.993)
C3': (6.789,55.260,55.492)
C1': (8.867,55.089,56.597)
O4': (9.101,55.560,55.275)
C5': (7.783,56.400,53.409)
P: (7.126,58.930,53.079)
O2: (10.020,54.849,59.049)
C4': (7.913,55.334,54.470)
C2': (7.453,54.493,56.628)
O2': (7.504,53.096,56.403)
N1: (9.005,56.218,57.540)
N3: (9.659,56.985,59.694)
N4: (9.286,59.160,60.299)
C6: (8.556,57.471,57.217)
C5: (8.631,58.479,58.096)
O3': (5.619,54.620,54.992)
OP1: (6.204,58.574,51.969)
OP2: (6.790,60.074,53.969)
C4: (9.200,58.198,59.376)
O5': (7.357,57.645,53.993)
C3': (6.789,55.260,55.492)
C1': (8.867,55.089,56.597)
O4': (9.101,55.560,55.275)
C5': (7.783,56.400,53.409)
P: (7.126,58.930,53.079)
O2: (10.020,54.849,59.049)
C4': (7.913,55.334,54.470)
C2': (7.453,54.493,56.628)
O2': (7.504,53.096,56.403)
N1: (9.005,56.218,57.540)
N3: (9.659,56.985,59.694)
N4: (9.286,59.160,60.299)
C6: (8.556,57.471,57.217)
C5: (8.631,58.479,58.096)
O3': (5.619,54.620,54.992)
Image (generated by PyMOL):