Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02630:02629
Extra
PDB:
ATOM 1 O3' C A2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 2 P U A2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 3 OP1 U A2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 4 OP2 U A2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 5 O5' U A2630 44.866 105.911 156.976 1.00 46.10 O
ATOM 6 C5' U A2630 44.569 104.909 155.978 1.00 43.85 C
ATOM 7 C4' U A2630 43.537 105.443 155.007 1.00 45.22 C
ATOM 8 O4' U A2630 42.334 105.765 155.750 1.00 45.54 O
ATOM 9 C3' U A2630 43.922 106.727 154.269 1.00 45.35 C
ATOM 10 O3' U A2630 43.218 106.862 153.023 1.00 46.07 O
ATOM 11 C2' U A2630 43.378 107.794 155.207 1.00 45.30 C
ATOM 12 O2' U A2630 43.154 109.026 154.563 1.00 44.55 O
ATOM 13 C1' U A2630 42.064 107.145 155.641 1.00 46.05 C
ATOM 14 N1 U A2630 41.501 107.596 156.923 1.00 48.28 N
ATOM 15 C2 U A2630 40.120 107.714 157.008 1.00 48.36 C
ATOM 16 O2 U A2630 39.370 107.475 156.076 1.00 47.56 O
ATOM 17 N3 U A2630 39.650 108.124 158.229 1.00 49.94 N
ATOM 18 C4 U A2630 40.395 108.426 159.348 1.00 51.32 C
ATOM 19 O4 U A2630 39.820 108.796 160.372 1.00 53.49 O
ATOM 20 C5 U A2630 41.812 108.283 159.184 1.00 50.93 C
ATOM 21 C6 U A2630 42.305 107.883 158.008 1.00 49.16 C
ATOM 22 P A A2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 23 OP1 A A2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 24 OP2 A A2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 25 O5' A A2631 41.794 104.846 152.503 1.00 46.15 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
ATOM 2 P U A2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 3 OP1 U A2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 4 OP2 U A2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 5 O5' U A2630 44.866 105.911 156.976 1.00 46.10 O
ATOM 6 C5' U A2630 44.569 104.909 155.978 1.00 43.85 C
ATOM 7 C4' U A2630 43.537 105.443 155.007 1.00 45.22 C
ATOM 8 O4' U A2630 42.334 105.765 155.750 1.00 45.54 O
ATOM 9 C3' U A2630 43.922 106.727 154.269 1.00 45.35 C
ATOM 10 O3' U A2630 43.218 106.862 153.023 1.00 46.07 O
ATOM 11 C2' U A2630 43.378 107.794 155.207 1.00 45.30 C
ATOM 12 O2' U A2630 43.154 109.026 154.563 1.00 44.55 O
ATOM 13 C1' U A2630 42.064 107.145 155.641 1.00 46.05 C
ATOM 14 N1 U A2630 41.501 107.596 156.923 1.00 48.28 N
ATOM 15 C2 U A2630 40.120 107.714 157.008 1.00 48.36 C
ATOM 16 O2 U A2630 39.370 107.475 156.076 1.00 47.56 O
ATOM 17 N3 U A2630 39.650 108.124 158.229 1.00 49.94 N
ATOM 18 C4 U A2630 40.395 108.426 159.348 1.00 51.32 C
ATOM 19 O4 U A2630 39.820 108.796 160.372 1.00 53.49 O
ATOM 20 C5 U A2630 41.812 108.283 159.184 1.00 50.93 C
ATOM 21 C6 U A2630 42.305 107.883 158.008 1.00 49.16 C
ATOM 22 P A A2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 23 OP1 A A2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 24 OP2 A A2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 25 O5' A A2631 41.794 104.846 152.503 1.00 46.15 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
Atoms:
C4: (40.395,108.426,159.348)
N3: (39.650,108.124,158.229)
OP1: (44.521,104.483,158.988)
OP2: (46.880,105.230,158.308)
C2: (40.120,107.714,157.008)
C1': (42.064,107.145,155.641)
C3': (43.922,106.727,154.269)
O5': (44.866,105.911,156.976)
O4': (42.334,105.765,155.750)
C5': (44.569,104.909,155.978)
P: (45.425,105.517,158.418)
C4': (43.537,105.443,155.007)
C2': (43.378,107.794,155.207)
O2': (43.154,109.026,154.563)
N1: (41.501,107.596,156.923)
O4: (39.820,108.796,160.372)
O2: (39.370,107.475,156.076)
C6: (42.305,107.883,158.008)
C5: (41.812,108.283,159.184)
O3': (43.218,106.862,153.023)
N3: (39.650,108.124,158.229)
OP1: (44.521,104.483,158.988)
OP2: (46.880,105.230,158.308)
C2: (40.120,107.714,157.008)
C1': (42.064,107.145,155.641)
C3': (43.922,106.727,154.269)
O5': (44.866,105.911,156.976)
O4': (42.334,105.765,155.750)
C5': (44.569,104.909,155.978)
P: (45.425,105.517,158.418)
C4': (43.537,105.443,155.007)
C2': (43.378,107.794,155.207)
O2': (43.154,109.026,154.563)
N1: (41.501,107.596,156.923)
O4: (39.820,108.796,160.372)
O2: (39.370,107.475,156.076)
C6: (42.305,107.883,158.008)
C5: (41.812,108.283,159.184)
O3': (43.218,106.862,153.023)
C2: (48.965,110.686,157.807)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
Image (generated by PyMOL):