ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02041:02453

Extra

PDB:
ATOM 1 O3' G A2040 52.444 128.212 106.321 1.00 35.77 O
ATOM 2 P A A2041 52.896 128.084 104.786 1.00 35.49 P
ATOM 3 OP1 A A2041 53.283 126.683 104.556 1.00 35.53 O
ATOM 4 OP2 A A2041 53.867 129.162 104.497 1.00 36.83 O
ATOM 5 O5' A A2041 51.565 128.375 103.965 1.00 34.32 O
ATOM 6 C5' A A2041 50.453 127.473 104.016 1.00 33.40 C
ATOM 7 C4' A A2041 49.273 128.059 103.283 1.00 35.14 C
ATOM 8 O4' A A2041 49.122 129.429 103.722 1.00 36.63 O
ATOM 9 C3' A A2041 49.368 128.209 101.768 1.00 36.13 C
ATOM 10 O3' A A2041 49.041 126.998 101.086 1.00 37.05 O
ATOM 11 C2' A A2041 48.293 129.254 101.503 1.00 37.17 C
ATOM 12 O2' A A2041 46.990 128.701 101.561 1.00 37.43 O
ATOM 13 C1' A A2041 48.460 130.176 102.713 1.00 37.38 C
ATOM 14 N9 A A2041 49.193 131.421 102.467 1.00 36.78 N
ATOM 15 C8 A A2041 50.453 131.762 102.886 1.00 38.96 C
ATOM 16 N7 A A2041 50.829 132.963 102.519 1.00 39.15 N
ATOM 17 C5 A A2041 49.747 133.445 101.805 1.00 38.68 C
ATOM 18 C6 A A2041 49.522 134.658 101.152 1.00 38.70 C
ATOM 19 N6 A A2041 50.412 135.647 101.110 1.00 37.27 N
ATOM 20 N1 A A2041 48.333 134.826 100.532 1.00 39.57 N
ATOM 21 C2 A A2041 47.442 133.830 100.571 1.00 38.16 C
ATOM 22 N3 A A2041 47.538 132.642 101.152 1.00 38.94 N
ATOM 23 C4 A A2041 48.731 132.508 101.762 1.00 39.04 C
ATOM 24 P A A2042 49.837 126.580 99.745 1.00 39.63 P
ATOM 25 OP1 A A2042 49.913 127.750 98.824 1.00 41.56 O
ATOM 26 OP2 A A2042 49.193 125.335 99.278 1.00 40.72 O
ATOM 27 O5' A A2042 51.315 126.228 100.245 1.00 36.46 O
TER

ATOM 1 O3' G B2452 62.895 134.794 105.363 1.00 31.93 O
ATOM 2 P A B2453 61.480 134.311 104.782 1.00 32.42 P
ATOM 3 OP1 A B2453 60.685 133.764 105.889 1.00 31.40 O
ATOM 4 OP2 A B2453 61.731 133.484 103.596 1.00 35.35 O
ATOM 5 O5' A B2453 60.796 135.657 104.281 1.00 36.18 O
ATOM 6 C5' A B2453 61.465 136.507 103.325 1.00 37.68 C
ATOM 7 C4' A B2453 60.462 137.259 102.477 1.00 37.87 C
ATOM 8 O4' A B2453 59.565 136.316 101.845 1.00 38.82 O
ATOM 9 C3' A B2453 59.517 138.200 103.192 1.00 38.19 C
ATOM 10 O3' A B2453 60.120 139.450 103.432 1.00 40.66 O
ATOM 11 C2' A B2453 58.400 138.343 102.179 1.00 38.36 C
ATOM 12 O2' A B2453 58.778 139.180 101.105 1.00 40.33 O
ATOM 13 C1' A B2453 58.292 136.913 101.666 1.00 37.80 C
ATOM 14 N9 A B2453 57.313 136.131 102.412 1.00 37.55 N
ATOM 15 C8 A B2453 57.540 135.327 103.496 1.00 40.26 C
ATOM 16 N7 A B2453 56.465 134.744 103.955 1.00 40.97 N
ATOM 17 C5 A B2453 55.457 135.197 103.118 1.00 39.00 C
ATOM 18 C6 A B2453 54.079 134.938 103.074 1.00 37.89 C
ATOM 19 N6 A B2453 53.451 134.115 103.916 1.00 36.26 N
ATOM 20 N1 A B2453 53.359 135.555 102.116 1.00 38.93 N
ATOM 21 C2 A B2453 53.991 136.364 101.260 1.00 39.22 C
ATOM 22 N3 A B2453 55.280 136.677 101.195 1.00 39.94 N
ATOM 23 C4 A B2453 55.967 136.054 102.164 1.00 38.22 C
ATOM 24 P G B2454 60.280 139.958 104.936 1.00 42.23 P
ATOM 25 OP1 G B2454 58.927 139.968 105.557 1.00 42.16 O
ATOM 26 OP2 G B2454 61.072 141.210 104.892 1.00 39.92 O
ATOM 27 O5' G B2454 61.155 138.787 105.568 1.00 40.20 O
TER

Atoms:
OP1: (53.283,126.683,104.556)
OP2: (53.867,129.162,104.497)
C3': (49.368,128.209,101.768)
C1': (48.460,130.176,102.713)
C5': (50.453,127.473,104.016)
O4': (49.122,129.429,103.722)
C8: (50.453,131.762,102.886)
O2': (46.990,128.701,101.561)
C6: (49.522,134.658,101.152)
C5: (49.747,133.445,101.805)
C4: (48.731,132.508,101.762)
P: (52.896,128.084,104.786)
C4': (49.273,128.059,103.283)
C2': (48.293,129.254,101.503)
C2: (47.442,133.830,100.571)
N1: (48.333,134.826,100.532)
N3: (47.538,132.642,101.152)
N6: (50.412,135.647,101.110)
N7: (50.829,132.963,102.519)
N9: (49.193,131.421,102.467)
O5': (51.565,128.375,103.965)
O3': (49.041,126.998,101.086)
OP1: (60.685,133.764,105.889)
OP2: (61.731,133.484,103.596)
C3': (59.517,138.200,103.192)
C1': (58.292,136.913,101.666)
C5': (61.465,136.507,103.325)
O4': (59.565,136.316,101.845)
C8: (57.540,135.327,103.496)
O2': (58.778,139.180,101.105)
C6: (54.079,134.938,103.074)
C5: (55.457,135.197,103.118)
C4: (55.967,136.054,102.164)
P: (61.480,134.311,104.782)
C4': (60.462,137.259,102.477)
C2': (58.400,138.343,102.179)
C2: (53.991,136.364,101.260)
N1: (53.359,135.555,102.116)
N3: (55.280,136.677,101.195)
N6: (53.451,134.115,103.916)
N7: (56.465,134.744,103.955)
N9: (57.313,136.131,102.412)
O5': (60.796,135.657,104.281)
O3': (60.120,139.450,103.432)
Image (generated by PyMOL):
PyMOL image
show in jmol