Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02630:02629
Extra
PDB:
ATOM 1 O3' C A2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 2 P U A2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 3 OP1 U A2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 4 OP2 U A2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 5 O5' U A2630 44.943 105.766 156.855 1.00 43.86 O
ATOM 6 C5' U A2630 44.562 104.763 155.890 1.00 42.67 C
ATOM 7 C4' U A2630 43.535 105.336 154.937 1.00 43.70 C
ATOM 8 O4' U A2630 42.347 105.683 155.692 1.00 44.61 O
ATOM 9 C3' U A2630 43.950 106.616 154.212 1.00 44.38 C
ATOM 10 O3' U A2630 43.241 106.770 152.972 1.00 44.47 O
ATOM 11 C2' U A2630 43.446 107.688 155.169 1.00 44.89 C
ATOM 12 O2' U A2630 43.256 108.933 154.534 1.00 45.75 O
ATOM 13 C1' U A2630 42.117 107.072 155.605 1.00 45.71 C
ATOM 14 N1 U A2630 41.545 107.513 156.888 1.00 47.11 N
ATOM 15 C2 U A2630 40.162 107.516 156.996 1.00 48.34 C
ATOM 16 O2 U A2630 39.421 107.190 156.084 1.00 49.99 O
ATOM 17 N3 U A2630 39.675 107.912 158.215 1.00 48.82 N
ATOM 18 C4 U A2630 40.404 108.301 159.312 1.00 48.88 C
ATOM 19 O4 U A2630 39.812 108.668 160.327 1.00 48.91 O
ATOM 20 C5 U A2630 41.826 108.277 159.126 1.00 48.80 C
ATOM 21 C6 U A2630 42.335 107.895 157.950 1.00 47.80 C
ATOM 22 P A A2631 43.148 105.545 151.923 1.00 45.46 P
ATOM 23 OP1 A A2631 44.326 104.651 152.082 1.00 43.61 O
ATOM 24 OP2 A A2631 42.849 106.137 150.597 1.00 45.82 O
ATOM 25 O5' A A2631 41.839 104.757 152.377 1.00 45.01 O
TER
ATOM 1 O3' U B2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 2 P C B2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 3 OP1 C B2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 4 OP2 C B2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 5 O5' C B2629 47.999 107.438 161.743 1.00 45.74 O
ATOM 6 C5' C B2629 46.611 107.784 161.874 1.00 45.07 C
ATOM 7 C4' C B2629 46.123 108.444 160.611 1.00 46.01 C
ATOM 8 O4' C B2629 46.828 109.692 160.429 1.00 46.39 O
ATOM 9 C3' C B2629 46.367 107.655 159.334 1.00 45.89 C
ATOM 10 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 11 C2' C B2629 46.434 108.753 158.277 1.00 46.19 C
ATOM 12 O2' C B2629 45.165 109.207 157.876 1.00 48.43 O
ATOM 13 C1' C B2629 47.083 109.899 159.056 1.00 46.70 C
ATOM 14 N1 C B2629 48.533 110.113 158.874 1.00 49.40 N
ATOM 15 C2 C B2629 48.998 110.636 157.656 1.00 52.09 C
ATOM 16 O2 C B2629 48.189 110.819 156.723 1.00 53.63 O
ATOM 17 N3 C B2629 50.316 110.930 157.527 1.00 52.76 N
ATOM 18 C4 C B2629 51.154 110.712 158.545 1.00 52.06 C
ATOM 19 N4 C B2629 52.437 111.070 158.391 1.00 51.31 N
ATOM 20 C5 C B2629 50.715 110.133 159.769 1.00 50.96 C
ATOM 21 C6 C B2629 49.413 109.848 159.887 1.00 49.57 C
ATOM 22 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 23 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 24 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 25 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
TER
ATOM 2 P U A2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 3 OP1 U A2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 4 OP2 U A2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 5 O5' U A2630 44.943 105.766 156.855 1.00 43.86 O
ATOM 6 C5' U A2630 44.562 104.763 155.890 1.00 42.67 C
ATOM 7 C4' U A2630 43.535 105.336 154.937 1.00 43.70 C
ATOM 8 O4' U A2630 42.347 105.683 155.692 1.00 44.61 O
ATOM 9 C3' U A2630 43.950 106.616 154.212 1.00 44.38 C
ATOM 10 O3' U A2630 43.241 106.770 152.972 1.00 44.47 O
ATOM 11 C2' U A2630 43.446 107.688 155.169 1.00 44.89 C
ATOM 12 O2' U A2630 43.256 108.933 154.534 1.00 45.75 O
ATOM 13 C1' U A2630 42.117 107.072 155.605 1.00 45.71 C
ATOM 14 N1 U A2630 41.545 107.513 156.888 1.00 47.11 N
ATOM 15 C2 U A2630 40.162 107.516 156.996 1.00 48.34 C
ATOM 16 O2 U A2630 39.421 107.190 156.084 1.00 49.99 O
ATOM 17 N3 U A2630 39.675 107.912 158.215 1.00 48.82 N
ATOM 18 C4 U A2630 40.404 108.301 159.312 1.00 48.88 C
ATOM 19 O4 U A2630 39.812 108.668 160.327 1.00 48.91 O
ATOM 20 C5 U A2630 41.826 108.277 159.126 1.00 48.80 C
ATOM 21 C6 U A2630 42.335 107.895 157.950 1.00 47.80 C
ATOM 22 P A A2631 43.148 105.545 151.923 1.00 45.46 P
ATOM 23 OP1 A A2631 44.326 104.651 152.082 1.00 43.61 O
ATOM 24 OP2 A A2631 42.849 106.137 150.597 1.00 45.82 O
ATOM 25 O5' A A2631 41.839 104.757 152.377 1.00 45.01 O
TER
ATOM 1 O3' U B2628 48.478 104.955 161.866 1.00 46.49 O
ATOM 2 P C B2629 48.657 106.329 162.674 1.00 47.24 P
ATOM 3 OP1 C B2629 50.100 106.630 162.772 1.00 47.94 O
ATOM 4 OP2 C B2629 47.842 106.222 163.912 1.00 50.53 O
ATOM 5 O5' C B2629 47.999 107.438 161.743 1.00 45.74 O
ATOM 6 C5' C B2629 46.611 107.784 161.874 1.00 45.07 C
ATOM 7 C4' C B2629 46.123 108.444 160.611 1.00 46.01 C
ATOM 8 O4' C B2629 46.828 109.692 160.429 1.00 46.39 O
ATOM 9 C3' C B2629 46.367 107.655 159.334 1.00 45.89 C
ATOM 10 O3' C B2629 45.280 106.739 159.136 1.00 44.22 O
ATOM 11 C2' C B2629 46.434 108.753 158.277 1.00 46.19 C
ATOM 12 O2' C B2629 45.165 109.207 157.876 1.00 48.43 O
ATOM 13 C1' C B2629 47.083 109.899 159.056 1.00 46.70 C
ATOM 14 N1 C B2629 48.533 110.113 158.874 1.00 49.40 N
ATOM 15 C2 C B2629 48.998 110.636 157.656 1.00 52.09 C
ATOM 16 O2 C B2629 48.189 110.819 156.723 1.00 53.63 O
ATOM 17 N3 C B2629 50.316 110.930 157.527 1.00 52.76 N
ATOM 18 C4 C B2629 51.154 110.712 158.545 1.00 52.06 C
ATOM 19 N4 C B2629 52.437 111.070 158.391 1.00 51.31 N
ATOM 20 C5 C B2629 50.715 110.133 159.769 1.00 50.96 C
ATOM 21 C6 C B2629 49.413 109.848 159.887 1.00 49.57 C
ATOM 22 P U B2630 45.493 105.379 158.300 1.00 44.44 P
ATOM 23 OP1 U B2630 44.578 104.358 158.881 1.00 42.66 O
ATOM 24 OP2 U B2630 46.944 105.077 158.188 1.00 42.03 O
ATOM 25 O5' U B2630 44.943 105.766 156.855 1.00 43.86 O
TER
Atoms:
C4: (40.404,108.301,159.312)
N3: (39.675,107.912,158.215)
OP1: (44.578,104.358,158.881)
OP2: (46.944,105.077,158.188)
C2: (40.162,107.516,156.996)
C1': (42.117,107.072,155.605)
C3': (43.950,106.616,154.212)
O5': (44.943,105.766,156.855)
O4': (42.347,105.683,155.692)
C5': (44.562,104.763,155.890)
P: (45.493,105.379,158.300)
C4': (43.535,105.336,154.937)
C2': (43.446,107.688,155.169)
O2': (43.256,108.933,154.534)
N1: (41.545,107.513,156.888)
O4: (39.812,108.668,160.327)
O2: (39.421,107.190,156.084)
C6: (42.335,107.895,157.950)
C5: (41.826,108.277,159.126)
O3': (43.241,106.770,152.972)
N3: (39.675,107.912,158.215)
OP1: (44.578,104.358,158.881)
OP2: (46.944,105.077,158.188)
C2: (40.162,107.516,156.996)
C1': (42.117,107.072,155.605)
C3': (43.950,106.616,154.212)
O5': (44.943,105.766,156.855)
O4': (42.347,105.683,155.692)
C5': (44.562,104.763,155.890)
P: (45.493,105.379,158.300)
C4': (43.535,105.336,154.937)
C2': (43.446,107.688,155.169)
O2': (43.256,108.933,154.534)
N1: (41.545,107.513,156.888)
O4: (39.812,108.668,160.327)
O2: (39.421,107.190,156.084)
C6: (42.335,107.895,157.950)
C5: (41.826,108.277,159.126)
O3': (43.241,106.770,152.972)
C2: (48.998,110.636,157.656)
OP1: (50.100,106.630,162.772)
OP2: (47.842,106.222,163.912)
C4: (51.154,110.712,158.545)
O5': (47.999,107.438,161.743)
C3': (46.367,107.655,159.334)
C1': (47.083,109.899,159.056)
O4': (46.828,109.692,160.429)
C5': (46.611,107.784,161.874)
P: (48.657,106.329,162.674)
O2: (48.189,110.819,156.723)
C4': (46.123,108.444,160.611)
C2': (46.434,108.753,158.277)
O2': (45.165,109.207,157.876)
N1: (48.533,110.113,158.874)
N3: (50.316,110.930,157.527)
N4: (52.437,111.070,158.391)
C6: (49.413,109.848,159.887)
C5: (50.715,110.133,159.769)
O3': (45.280,106.739,159.136)
OP1: (50.100,106.630,162.772)
OP2: (47.842,106.222,163.912)
C4: (51.154,110.712,158.545)
O5': (47.999,107.438,161.743)
C3': (46.367,107.655,159.334)
C1': (47.083,109.899,159.056)
O4': (46.828,109.692,160.429)
C5': (46.611,107.784,161.874)
P: (48.657,106.329,162.674)
O2: (48.189,110.819,156.723)
C4': (46.123,108.444,160.611)
C2': (46.434,108.753,158.277)
O2': (45.165,109.207,157.876)
N1: (48.533,110.113,158.874)
N3: (50.316,110.930,157.527)
N4: (52.437,111.070,158.391)
C6: (49.413,109.848,159.887)
C5: (50.715,110.133,159.769)
O3': (45.280,106.739,159.136)
Image (generated by PyMOL):