Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.579 54.716 54.921 1.00 70.57 O
ATOM 2 P U A 701 4.145 55.127 55.518 1.00 71.66 P
ATOM 3 OP1 U A 701 3.101 54.550 54.634 1.00 72.02 O
ATOM 4 OP2 U A 701 4.145 56.583 55.794 1.00 72.23 O
ATOM 5 O5' U A 701 4.125 54.383 56.923 1.00 72.23 O
ATOM 6 C5' U A 701 2.943 54.352 57.739 1.00 73.21 C
ATOM 7 C4' U A 701 3.004 53.170 58.676 1.00 73.42 C
ATOM 8 O4' U A 701 2.950 51.946 57.893 1.00 73.29 O
ATOM 9 C3' U A 701 4.267 53.073 59.525 1.00 73.20 C
ATOM 10 O3' U A 701 3.942 52.477 60.775 1.00 74.55 O
ATOM 11 C2' U A 701 5.160 52.159 58.689 1.00 72.78 C
ATOM 12 O2' U A 701 6.133 51.476 59.454 1.00 70.54 O
ATOM 13 C1' U A 701 4.135 51.198 58.082 1.00 73.30 C
ATOM 14 N1 U A 701 4.523 50.644 56.773 1.00 75.13 N
ATOM 15 C2 U A 701 4.522 49.264 56.614 1.00 75.94 C
ATOM 16 O2 U A 701 4.204 48.488 57.503 1.00 77.48 O
ATOM 17 N3 U A 701 4.900 48.824 55.368 1.00 75.44 N
ATOM 18 C4 U A 701 5.262 49.599 54.286 1.00 74.82 C
ATOM 19 O4 U A 701 5.556 49.055 53.222 1.00 74.62 O
ATOM 20 C5 U A 701 5.234 51.007 54.524 1.00 75.33 C
ATOM 21 C6 U A 701 4.877 51.470 55.726 1.00 75.74 C
ATOM 22 P U A 702 3.541 53.413 62.021 1.00 75.10 P
ATOM 23 OP1 U A 702 2.994 52.545 63.089 1.00 76.31 O
ATOM 24 OP2 U A 702 2.717 54.537 61.501 1.00 74.00 O
ATOM 25 O5' U A 702 4.929 54.015 62.526 1.00 77.36 O
TER
ATOM 1 O3' G B 699 8.560 59.183 52.410 1.00 59.27 O
ATOM 2 P C B 700 7.149 58.898 53.118 1.00 60.49 P
ATOM 3 OP1 C B 700 6.233 58.494 52.027 1.00 60.92 O
ATOM 4 OP2 C B 700 6.769 60.028 54.008 1.00 58.07 O
ATOM 5 O5' C B 700 7.463 57.635 54.037 1.00 61.48 O
ATOM 6 C5' C B 700 7.887 56.389 53.451 1.00 64.89 C
ATOM 7 C4' C B 700 7.922 55.301 54.497 1.00 67.08 C
ATOM 8 O4' C B 700 9.086 55.464 55.350 1.00 68.03 O
ATOM 9 C3' C B 700 6.754 55.294 55.467 1.00 68.86 C
ATOM 10 O3' C B 700 5.579 54.716 54.921 1.00 70.57 O
ATOM 11 C2' C B 700 7.327 54.524 56.648 1.00 69.19 C
ATOM 12 O2' C B 700 7.334 53.125 56.454 1.00 69.03 O
ATOM 13 C1' C B 700 8.763 55.059 56.673 1.00 68.66 C
ATOM 14 N1 C B 700 8.911 56.221 57.571 1.00 68.26 N
ATOM 15 C2 C B 700 9.521 56.035 58.816 1.00 68.53 C
ATOM 16 O2 C B 700 9.957 54.916 59.109 1.00 69.65 O
ATOM 17 N3 C B 700 9.623 57.078 59.667 1.00 68.77 N
ATOM 18 C4 C B 700 9.154 58.275 59.312 1.00 68.76 C
ATOM 19 N4 C B 700 9.259 59.271 60.195 1.00 67.72 N
ATOM 20 C5 C B 700 8.550 58.502 58.039 1.00 68.36 C
ATOM 21 C6 C B 700 8.450 57.458 57.209 1.00 67.90 C
ATOM 22 P U B 701 4.145 55.127 55.518 1.00 71.66 P
ATOM 23 OP1 U B 701 3.101 54.550 54.634 1.00 72.02 O
ATOM 24 OP2 U B 701 4.145 56.583 55.794 1.00 72.23 O
ATOM 25 O5' U B 701 4.125 54.383 56.923 1.00 72.23 O
TER
ATOM 2 P U A 701 4.145 55.127 55.518 1.00 71.66 P
ATOM 3 OP1 U A 701 3.101 54.550 54.634 1.00 72.02 O
ATOM 4 OP2 U A 701 4.145 56.583 55.794 1.00 72.23 O
ATOM 5 O5' U A 701 4.125 54.383 56.923 1.00 72.23 O
ATOM 6 C5' U A 701 2.943 54.352 57.739 1.00 73.21 C
ATOM 7 C4' U A 701 3.004 53.170 58.676 1.00 73.42 C
ATOM 8 O4' U A 701 2.950 51.946 57.893 1.00 73.29 O
ATOM 9 C3' U A 701 4.267 53.073 59.525 1.00 73.20 C
ATOM 10 O3' U A 701 3.942 52.477 60.775 1.00 74.55 O
ATOM 11 C2' U A 701 5.160 52.159 58.689 1.00 72.78 C
ATOM 12 O2' U A 701 6.133 51.476 59.454 1.00 70.54 O
ATOM 13 C1' U A 701 4.135 51.198 58.082 1.00 73.30 C
ATOM 14 N1 U A 701 4.523 50.644 56.773 1.00 75.13 N
ATOM 15 C2 U A 701 4.522 49.264 56.614 1.00 75.94 C
ATOM 16 O2 U A 701 4.204 48.488 57.503 1.00 77.48 O
ATOM 17 N3 U A 701 4.900 48.824 55.368 1.00 75.44 N
ATOM 18 C4 U A 701 5.262 49.599 54.286 1.00 74.82 C
ATOM 19 O4 U A 701 5.556 49.055 53.222 1.00 74.62 O
ATOM 20 C5 U A 701 5.234 51.007 54.524 1.00 75.33 C
ATOM 21 C6 U A 701 4.877 51.470 55.726 1.00 75.74 C
ATOM 22 P U A 702 3.541 53.413 62.021 1.00 75.10 P
ATOM 23 OP1 U A 702 2.994 52.545 63.089 1.00 76.31 O
ATOM 24 OP2 U A 702 2.717 54.537 61.501 1.00 74.00 O
ATOM 25 O5' U A 702 4.929 54.015 62.526 1.00 77.36 O
TER
ATOM 1 O3' G B 699 8.560 59.183 52.410 1.00 59.27 O
ATOM 2 P C B 700 7.149 58.898 53.118 1.00 60.49 P
ATOM 3 OP1 C B 700 6.233 58.494 52.027 1.00 60.92 O
ATOM 4 OP2 C B 700 6.769 60.028 54.008 1.00 58.07 O
ATOM 5 O5' C B 700 7.463 57.635 54.037 1.00 61.48 O
ATOM 6 C5' C B 700 7.887 56.389 53.451 1.00 64.89 C
ATOM 7 C4' C B 700 7.922 55.301 54.497 1.00 67.08 C
ATOM 8 O4' C B 700 9.086 55.464 55.350 1.00 68.03 O
ATOM 9 C3' C B 700 6.754 55.294 55.467 1.00 68.86 C
ATOM 10 O3' C B 700 5.579 54.716 54.921 1.00 70.57 O
ATOM 11 C2' C B 700 7.327 54.524 56.648 1.00 69.19 C
ATOM 12 O2' C B 700 7.334 53.125 56.454 1.00 69.03 O
ATOM 13 C1' C B 700 8.763 55.059 56.673 1.00 68.66 C
ATOM 14 N1 C B 700 8.911 56.221 57.571 1.00 68.26 N
ATOM 15 C2 C B 700 9.521 56.035 58.816 1.00 68.53 C
ATOM 16 O2 C B 700 9.957 54.916 59.109 1.00 69.65 O
ATOM 17 N3 C B 700 9.623 57.078 59.667 1.00 68.77 N
ATOM 18 C4 C B 700 9.154 58.275 59.312 1.00 68.76 C
ATOM 19 N4 C B 700 9.259 59.271 60.195 1.00 67.72 N
ATOM 20 C5 C B 700 8.550 58.502 58.039 1.00 68.36 C
ATOM 21 C6 C B 700 8.450 57.458 57.209 1.00 67.90 C
ATOM 22 P U B 701 4.145 55.127 55.518 1.00 71.66 P
ATOM 23 OP1 U B 701 3.101 54.550 54.634 1.00 72.02 O
ATOM 24 OP2 U B 701 4.145 56.583 55.794 1.00 72.23 O
ATOM 25 O5' U B 701 4.125 54.383 56.923 1.00 72.23 O
TER
Atoms:
C4: (5.262,49.599,54.286)
N3: (4.900,48.824,55.368)
OP1: (3.101,54.550,54.634)
OP2: (4.145,56.583,55.794)
C2: (4.522,49.264,56.614)
C1': (4.135,51.198,58.082)
C3': (4.267,53.073,59.525)
O5': (4.125,54.383,56.923)
O4': (2.950,51.946,57.893)
C5': (2.943,54.352,57.739)
P: (4.145,55.127,55.518)
C4': (3.004,53.170,58.676)
C2': (5.160,52.159,58.689)
O2': (6.133,51.476,59.454)
N1: (4.523,50.644,56.773)
O4: (5.556,49.055,53.222)
O2: (4.204,48.488,57.503)
C6: (4.877,51.470,55.726)
C5: (5.234,51.007,54.524)
O3': (3.942,52.477,60.775)
N3: (4.900,48.824,55.368)
OP1: (3.101,54.550,54.634)
OP2: (4.145,56.583,55.794)
C2: (4.522,49.264,56.614)
C1': (4.135,51.198,58.082)
C3': (4.267,53.073,59.525)
O5': (4.125,54.383,56.923)
O4': (2.950,51.946,57.893)
C5': (2.943,54.352,57.739)
P: (4.145,55.127,55.518)
C4': (3.004,53.170,58.676)
C2': (5.160,52.159,58.689)
O2': (6.133,51.476,59.454)
N1: (4.523,50.644,56.773)
O4: (5.556,49.055,53.222)
O2: (4.204,48.488,57.503)
C6: (4.877,51.470,55.726)
C5: (5.234,51.007,54.524)
O3': (3.942,52.477,60.775)
C2: (9.521,56.035,58.816)
OP1: (6.233,58.494,52.027)
OP2: (6.769,60.028,54.008)
C4: (9.154,58.275,59.312)
O5': (7.463,57.635,54.037)
C3': (6.754,55.294,55.467)
C1': (8.763,55.059,56.673)
O4': (9.086,55.464,55.350)
C5': (7.887,56.389,53.451)
P: (7.149,58.898,53.118)
O2: (9.957,54.916,59.109)
C4': (7.922,55.301,54.497)
C2': (7.327,54.524,56.648)
O2': (7.334,53.125,56.454)
N1: (8.911,56.221,57.571)
N3: (9.623,57.078,59.667)
N4: (9.259,59.271,60.195)
C6: (8.450,57.458,57.209)
C5: (8.550,58.502,58.039)
O3': (5.579,54.716,54.921)
OP1: (6.233,58.494,52.027)
OP2: (6.769,60.028,54.008)
C4: (9.154,58.275,59.312)
O5': (7.463,57.635,54.037)
C3': (6.754,55.294,55.467)
C1': (8.763,55.059,56.673)
O4': (9.086,55.464,55.350)
C5': (7.887,56.389,53.451)
P: (7.149,58.898,53.118)
O2: (9.957,54.916,59.109)
C4': (7.922,55.301,54.497)
C2': (7.327,54.524,56.648)
O2': (7.334,53.125,56.454)
N1: (8.911,56.221,57.571)
N3: (9.623,57.078,59.667)
N4: (9.259,59.271,60.195)
C6: (8.450,57.458,57.209)
C5: (8.550,58.502,58.039)
O3': (5.579,54.716,54.921)
Image (generated by PyMOL):