Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02630:02629
Extra
PDB:
ATOM 1 O3' C A2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 2 P U A2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 3 OP1 U A2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 4 OP2 U A2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 5 O5' U A2630 44.932 106.069 157.311 1.00 51.59 O
ATOM 6 C5' U A2630 44.574 105.071 156.337 1.00 53.28 C
ATOM 7 C4' U A2630 43.547 105.633 155.380 1.00 55.09 C
ATOM 8 O4' U A2630 42.348 105.946 156.132 1.00 55.87 O
ATOM 9 C3' U A2630 43.950 106.931 154.674 1.00 55.68 C
ATOM 10 O3' U A2630 43.279 107.087 153.409 1.00 54.78 O
ATOM 11 C2' U A2630 43.407 107.980 155.638 1.00 56.50 C
ATOM 12 O2' U A2630 43.176 109.238 155.043 1.00 59.37 O
ATOM 13 C1' U A2630 42.092 107.329 156.055 1.00 56.83 C
ATOM 14 N1 U A2630 41.534 107.761 157.342 1.00 58.15 N
ATOM 15 C2 U A2630 40.158 107.836 157.436 1.00 58.99 C
ATOM 16 O2 U A2630 39.417 107.560 156.513 1.00 57.87 O
ATOM 17 N3 U A2630 39.678 108.245 158.655 1.00 60.68 N
ATOM 18 C4 U A2630 40.417 108.579 159.768 1.00 60.74 C
ATOM 19 O4 U A2630 39.838 108.988 160.774 1.00 59.97 O
ATOM 20 C5 U A2630 41.838 108.468 159.596 1.00 61.09 C
ATOM 21 C6 U A2630 42.335 108.075 158.417 1.00 59.14 C
ATOM 22 P A A2631 43.249 105.876 152.342 1.00 53.77 P
ATOM 23 OP1 A A2631 44.448 105.024 152.535 1.00 52.23 O
ATOM 24 OP2 A A2631 42.972 106.465 151.010 1.00 52.65 O
ATOM 25 O5' A A2631 41.954 105.053 152.765 1.00 53.17 O
TER
ATOM 1 O3' U B2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 2 P C B2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C B2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C B2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C B2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C B2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C B2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C B2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C B2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C B2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C B2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C B2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C B2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C B2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C B2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C B2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C B2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C B2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C B2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C B2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
TER
ATOM 2 P U A2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 3 OP1 U A2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 4 OP2 U A2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 5 O5' U A2630 44.932 106.069 157.311 1.00 51.59 O
ATOM 6 C5' U A2630 44.574 105.071 156.337 1.00 53.28 C
ATOM 7 C4' U A2630 43.547 105.633 155.380 1.00 55.09 C
ATOM 8 O4' U A2630 42.348 105.946 156.132 1.00 55.87 O
ATOM 9 C3' U A2630 43.950 106.931 154.674 1.00 55.68 C
ATOM 10 O3' U A2630 43.279 107.087 153.409 1.00 54.78 O
ATOM 11 C2' U A2630 43.407 107.980 155.638 1.00 56.50 C
ATOM 12 O2' U A2630 43.176 109.238 155.043 1.00 59.37 O
ATOM 13 C1' U A2630 42.092 107.329 156.055 1.00 56.83 C
ATOM 14 N1 U A2630 41.534 107.761 157.342 1.00 58.15 N
ATOM 15 C2 U A2630 40.158 107.836 157.436 1.00 58.99 C
ATOM 16 O2 U A2630 39.417 107.560 156.513 1.00 57.87 O
ATOM 17 N3 U A2630 39.678 108.245 158.655 1.00 60.68 N
ATOM 18 C4 U A2630 40.417 108.579 159.768 1.00 60.74 C
ATOM 19 O4 U A2630 39.838 108.988 160.774 1.00 59.97 O
ATOM 20 C5 U A2630 41.838 108.468 159.596 1.00 61.09 C
ATOM 21 C6 U A2630 42.335 108.075 158.417 1.00 59.14 C
ATOM 22 P A A2631 43.249 105.876 152.342 1.00 53.77 P
ATOM 23 OP1 A A2631 44.448 105.024 152.535 1.00 52.23 O
ATOM 24 OP2 A A2631 42.972 106.465 151.010 1.00 52.65 O
ATOM 25 O5' A A2631 41.954 105.053 152.765 1.00 53.17 O
TER
ATOM 1 O3' U B2628 48.694 105.244 162.444 1.00 54.00 O
ATOM 2 P C B2629 48.870 106.631 163.226 1.00 54.65 P
ATOM 3 OP1 C B2629 50.301 106.986 163.224 1.00 56.38 O
ATOM 4 OP2 C B2629 48.142 106.519 164.515 1.00 58.24 O
ATOM 5 O5' C B2629 48.124 107.700 162.317 1.00 53.71 O
ATOM 6 C5' C B2629 46.701 107.862 162.375 1.00 52.83 C
ATOM 7 C4' C B2629 46.230 108.612 161.160 1.00 52.97 C
ATOM 8 O4' C B2629 46.986 109.844 161.069 1.00 53.55 O
ATOM 9 C3' C B2629 46.476 107.901 159.839 1.00 52.78 C
ATOM 10 O3' C B2629 45.365 107.025 159.584 1.00 52.87 O
ATOM 11 C2' C B2629 46.584 109.069 158.857 1.00 53.32 C
ATOM 12 O2' C B2629 45.342 109.614 158.483 1.00 55.02 O
ATOM 13 C1' C B2629 47.263 110.138 159.715 1.00 53.86 C
ATOM 14 N1 C B2629 48.724 110.330 159.546 1.00 55.33 N
ATOM 15 C2 C B2629 49.214 110.781 158.309 1.00 56.50 C
ATOM 16 O2 C B2629 48.420 110.944 157.363 1.00 58.16 O
ATOM 17 N3 C B2629 50.537 111.031 158.176 1.00 56.09 N
ATOM 18 C4 C B2629 51.360 110.853 159.209 1.00 55.96 C
ATOM 19 N4 C B2629 52.652 111.170 159.044 1.00 53.80 N
ATOM 20 C5 C B2629 50.897 110.358 160.463 1.00 56.21 C
ATOM 21 C6 C B2629 49.587 110.108 160.585 1.00 55.94 C
ATOM 22 P U B2630 45.554 105.672 158.722 1.00 51.63 P
ATOM 23 OP1 U B2630 44.664 104.643 159.319 1.00 51.74 O
ATOM 24 OP2 U B2630 46.991 105.368 158.544 1.00 51.06 O
ATOM 25 O5' U B2630 44.932 106.069 157.311 1.00 51.59 O
TER
Atoms:
C4: (40.417,108.579,159.768)
N3: (39.678,108.245,158.655)
OP1: (44.664,104.643,159.319)
OP2: (46.991,105.368,158.544)
C2: (40.158,107.836,157.436)
C1': (42.092,107.329,156.055)
C3': (43.950,106.931,154.674)
O5': (44.932,106.069,157.311)
O4': (42.348,105.946,156.132)
C5': (44.574,105.071,156.337)
P: (45.554,105.672,158.722)
C4': (43.547,105.633,155.380)
C2': (43.407,107.980,155.638)
O2': (43.176,109.238,155.043)
N1: (41.534,107.761,157.342)
O4: (39.838,108.988,160.774)
O2: (39.417,107.560,156.513)
C6: (42.335,108.075,158.417)
C5: (41.838,108.468,159.596)
O3': (43.279,107.087,153.409)
N3: (39.678,108.245,158.655)
OP1: (44.664,104.643,159.319)
OP2: (46.991,105.368,158.544)
C2: (40.158,107.836,157.436)
C1': (42.092,107.329,156.055)
C3': (43.950,106.931,154.674)
O5': (44.932,106.069,157.311)
O4': (42.348,105.946,156.132)
C5': (44.574,105.071,156.337)
P: (45.554,105.672,158.722)
C4': (43.547,105.633,155.380)
C2': (43.407,107.980,155.638)
O2': (43.176,109.238,155.043)
N1: (41.534,107.761,157.342)
O4: (39.838,108.988,160.774)
O2: (39.417,107.560,156.513)
C6: (42.335,108.075,158.417)
C5: (41.838,108.468,159.596)
O3': (43.279,107.087,153.409)
C2: (49.214,110.781,158.309)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
OP1: (50.301,106.986,163.224)
OP2: (48.142,106.519,164.515)
C4: (51.360,110.853,159.209)
O5': (48.124,107.700,162.317)
C3': (46.476,107.901,159.839)
C1': (47.263,110.138,159.715)
O4': (46.986,109.844,161.069)
C5': (46.701,107.862,162.375)
P: (48.870,106.631,163.226)
O2: (48.420,110.944,157.363)
C4': (46.230,108.612,161.160)
C2': (46.584,109.069,158.857)
O2': (45.342,109.614,158.483)
N1: (48.724,110.330,159.546)
N3: (50.537,111.031,158.176)
N4: (52.652,111.170,159.044)
C6: (49.587,110.108,160.585)
C5: (50.897,110.358,160.463)
O3': (45.365,107.025,159.584)
Image (generated by PyMOL):