Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.807 54.911 55.320 1.00 87.74 O
ATOM 2 P U A 701 4.366 55.242 55.953 1.00 90.12 P
ATOM 3 OP1 U A 701 3.337 54.541 55.141 1.00 89.40 O
ATOM 4 OP2 U A 701 4.265 56.713 56.153 1.00 89.51 O
ATOM 5 O5' U A 701 4.441 54.565 57.392 1.00 90.95 O
ATOM 6 C5' U A 701 3.274 54.445 58.223 1.00 92.01 C
ATOM 7 C4' U A 701 3.396 53.230 59.119 1.00 93.04 C
ATOM 8 O4' U A 701 3.325 52.017 58.318 1.00 92.91 O
ATOM 9 C3' U A 701 4.678 53.124 59.938 1.00 93.17 C
ATOM 10 O3' U A 701 4.357 52.554 61.200 1.00 94.33 O
ATOM 11 C2' U A 701 5.554 52.205 59.085 1.00 92.31 C
ATOM 12 O2' U A 701 6.519 51.490 59.835 1.00 89.51 O
ATOM 13 C1' U A 701 4.516 51.263 58.470 1.00 92.94 C
ATOM 14 N1 U A 701 4.883 50.739 57.141 1.00 93.73 N
ATOM 15 C2 U A 701 5.013 49.363 56.981 1.00 93.67 C
ATOM 16 O2 U A 701 4.859 48.563 57.889 1.00 94.49 O
ATOM 17 N3 U A 701 5.331 48.956 55.711 1.00 93.44 N
ATOM 18 C4 U A 701 5.534 49.755 54.606 1.00 93.52 C
ATOM 19 O4 U A 701 5.794 49.232 53.521 1.00 93.40 O
ATOM 20 C5 U A 701 5.395 51.157 54.850 1.00 93.88 C
ATOM 21 C6 U A 701 5.084 51.591 56.074 1.00 93.77 C
ATOM 22 P U A 702 3.850 53.511 62.395 1.00 95.21 P
ATOM 23 OP1 U A 702 3.160 52.675 63.409 1.00 96.14 O
ATOM 24 OP2 U A 702 3.125 54.661 61.780 1.00 93.35 O
ATOM 25 O5' U A 702 5.198 54.072 63.040 1.00 96.78 O
TER
ATOM 1 O3' G B 699 8.872 59.336 52.700 1.00 75.10 O
ATOM 2 P C B 700 7.415 59.095 53.342 1.00 75.72 P
ATOM 3 OP1 C B 700 6.568 58.654 52.210 1.00 75.90 O
ATOM 4 OP2 C B 700 6.982 60.258 54.160 1.00 74.76 O
ATOM 5 O5' C B 700 7.654 57.858 54.316 1.00 77.77 O
ATOM 6 C5' C B 700 8.071 56.585 53.786 1.00 81.37 C
ATOM 7 C4' C B 700 8.129 55.545 54.880 1.00 83.87 C
ATOM 8 O4' C B 700 9.290 55.760 55.725 1.00 84.64 O
ATOM 9 C3' C B 700 6.967 55.530 55.858 1.00 85.05 C
ATOM 10 O3' C B 700 5.807 54.911 55.320 1.00 87.74 O
ATOM 11 C2' C B 700 7.564 54.771 57.036 1.00 84.78 C
ATOM 12 O2' C B 700 7.601 53.372 56.833 1.00 84.03 O
ATOM 13 C1' C B 700 8.993 55.325 57.045 1.00 84.83 C
ATOM 14 N1 C B 700 9.152 56.462 57.974 1.00 84.67 N
ATOM 15 C2 C B 700 9.868 56.264 59.162 1.00 84.86 C
ATOM 16 O2 C B 700 10.406 55.165 59.365 1.00 85.28 O
ATOM 17 N3 C B 700 9.964 57.277 60.054 1.00 84.92 N
ATOM 18 C4 C B 700 9.396 58.455 59.788 1.00 84.92 C
ATOM 19 N4 C B 700 9.497 59.419 60.709 1.00 84.18 N
ATOM 20 C5 C B 700 8.694 58.697 58.569 1.00 84.83 C
ATOM 21 C6 C B 700 8.597 57.683 57.700 1.00 84.80 C
ATOM 22 P U B 701 4.366 55.242 55.953 1.00 90.12 P
ATOM 23 OP1 U B 701 3.337 54.541 55.141 1.00 89.40 O
ATOM 24 OP2 U B 701 4.265 56.713 56.153 1.00 89.51 O
ATOM 25 O5' U B 701 4.441 54.565 57.392 1.00 90.95 O
TER
ATOM 2 P U A 701 4.366 55.242 55.953 1.00 90.12 P
ATOM 3 OP1 U A 701 3.337 54.541 55.141 1.00 89.40 O
ATOM 4 OP2 U A 701 4.265 56.713 56.153 1.00 89.51 O
ATOM 5 O5' U A 701 4.441 54.565 57.392 1.00 90.95 O
ATOM 6 C5' U A 701 3.274 54.445 58.223 1.00 92.01 C
ATOM 7 C4' U A 701 3.396 53.230 59.119 1.00 93.04 C
ATOM 8 O4' U A 701 3.325 52.017 58.318 1.00 92.91 O
ATOM 9 C3' U A 701 4.678 53.124 59.938 1.00 93.17 C
ATOM 10 O3' U A 701 4.357 52.554 61.200 1.00 94.33 O
ATOM 11 C2' U A 701 5.554 52.205 59.085 1.00 92.31 C
ATOM 12 O2' U A 701 6.519 51.490 59.835 1.00 89.51 O
ATOM 13 C1' U A 701 4.516 51.263 58.470 1.00 92.94 C
ATOM 14 N1 U A 701 4.883 50.739 57.141 1.00 93.73 N
ATOM 15 C2 U A 701 5.013 49.363 56.981 1.00 93.67 C
ATOM 16 O2 U A 701 4.859 48.563 57.889 1.00 94.49 O
ATOM 17 N3 U A 701 5.331 48.956 55.711 1.00 93.44 N
ATOM 18 C4 U A 701 5.534 49.755 54.606 1.00 93.52 C
ATOM 19 O4 U A 701 5.794 49.232 53.521 1.00 93.40 O
ATOM 20 C5 U A 701 5.395 51.157 54.850 1.00 93.88 C
ATOM 21 C6 U A 701 5.084 51.591 56.074 1.00 93.77 C
ATOM 22 P U A 702 3.850 53.511 62.395 1.00 95.21 P
ATOM 23 OP1 U A 702 3.160 52.675 63.409 1.00 96.14 O
ATOM 24 OP2 U A 702 3.125 54.661 61.780 1.00 93.35 O
ATOM 25 O5' U A 702 5.198 54.072 63.040 1.00 96.78 O
TER
ATOM 1 O3' G B 699 8.872 59.336 52.700 1.00 75.10 O
ATOM 2 P C B 700 7.415 59.095 53.342 1.00 75.72 P
ATOM 3 OP1 C B 700 6.568 58.654 52.210 1.00 75.90 O
ATOM 4 OP2 C B 700 6.982 60.258 54.160 1.00 74.76 O
ATOM 5 O5' C B 700 7.654 57.858 54.316 1.00 77.77 O
ATOM 6 C5' C B 700 8.071 56.585 53.786 1.00 81.37 C
ATOM 7 C4' C B 700 8.129 55.545 54.880 1.00 83.87 C
ATOM 8 O4' C B 700 9.290 55.760 55.725 1.00 84.64 O
ATOM 9 C3' C B 700 6.967 55.530 55.858 1.00 85.05 C
ATOM 10 O3' C B 700 5.807 54.911 55.320 1.00 87.74 O
ATOM 11 C2' C B 700 7.564 54.771 57.036 1.00 84.78 C
ATOM 12 O2' C B 700 7.601 53.372 56.833 1.00 84.03 O
ATOM 13 C1' C B 700 8.993 55.325 57.045 1.00 84.83 C
ATOM 14 N1 C B 700 9.152 56.462 57.974 1.00 84.67 N
ATOM 15 C2 C B 700 9.868 56.264 59.162 1.00 84.86 C
ATOM 16 O2 C B 700 10.406 55.165 59.365 1.00 85.28 O
ATOM 17 N3 C B 700 9.964 57.277 60.054 1.00 84.92 N
ATOM 18 C4 C B 700 9.396 58.455 59.788 1.00 84.92 C
ATOM 19 N4 C B 700 9.497 59.419 60.709 1.00 84.18 N
ATOM 20 C5 C B 700 8.694 58.697 58.569 1.00 84.83 C
ATOM 21 C6 C B 700 8.597 57.683 57.700 1.00 84.80 C
ATOM 22 P U B 701 4.366 55.242 55.953 1.00 90.12 P
ATOM 23 OP1 U B 701 3.337 54.541 55.141 1.00 89.40 O
ATOM 24 OP2 U B 701 4.265 56.713 56.153 1.00 89.51 O
ATOM 25 O5' U B 701 4.441 54.565 57.392 1.00 90.95 O
TER
Atoms:
C4: (5.534,49.755,54.606)
N3: (5.331,48.956,55.711)
OP1: (3.337,54.541,55.141)
OP2: (4.265,56.713,56.153)
C2: (5.013,49.363,56.981)
C1': (4.516,51.263,58.470)
C3': (4.678,53.124,59.938)
O5': (4.441,54.565,57.392)
O4': (3.325,52.017,58.318)
C5': (3.274,54.445,58.223)
P: (4.366,55.242,55.953)
C4': (3.396,53.230,59.119)
C2': (5.554,52.205,59.085)
O2': (6.519,51.490,59.835)
N1: (4.883,50.739,57.141)
O4: (5.794,49.232,53.521)
O2: (4.859,48.563,57.889)
C6: (5.084,51.591,56.074)
C5: (5.395,51.157,54.850)
O3': (4.357,52.554,61.200)
N3: (5.331,48.956,55.711)
OP1: (3.337,54.541,55.141)
OP2: (4.265,56.713,56.153)
C2: (5.013,49.363,56.981)
C1': (4.516,51.263,58.470)
C3': (4.678,53.124,59.938)
O5': (4.441,54.565,57.392)
O4': (3.325,52.017,58.318)
C5': (3.274,54.445,58.223)
P: (4.366,55.242,55.953)
C4': (3.396,53.230,59.119)
C2': (5.554,52.205,59.085)
O2': (6.519,51.490,59.835)
N1: (4.883,50.739,57.141)
O4: (5.794,49.232,53.521)
O2: (4.859,48.563,57.889)
C6: (5.084,51.591,56.074)
C5: (5.395,51.157,54.850)
O3': (4.357,52.554,61.200)
C2: (9.868,56.264,59.162)
OP1: (6.568,58.654,52.210)
OP2: (6.982,60.258,54.160)
C4: (9.396,58.455,59.788)
O5': (7.654,57.858,54.316)
C3': (6.967,55.530,55.858)
C1': (8.993,55.325,57.045)
O4': (9.290,55.760,55.725)
C5': (8.071,56.585,53.786)
P: (7.415,59.095,53.342)
O2: (10.406,55.165,59.365)
C4': (8.129,55.545,54.880)
C2': (7.564,54.771,57.036)
O2': (7.601,53.372,56.833)
N1: (9.152,56.462,57.974)
N3: (9.964,57.277,60.054)
N4: (9.497,59.419,60.709)
C6: (8.597,57.683,57.700)
C5: (8.694,58.697,58.569)
O3': (5.807,54.911,55.320)
OP1: (6.568,58.654,52.210)
OP2: (6.982,60.258,54.160)
C4: (9.396,58.455,59.788)
O5': (7.654,57.858,54.316)
C3': (6.967,55.530,55.858)
C1': (8.993,55.325,57.045)
O4': (9.290,55.760,55.725)
C5': (8.071,56.585,53.786)
P: (7.415,59.095,53.342)
O2: (10.406,55.165,59.365)
C4': (8.129,55.545,54.880)
C2': (7.564,54.771,57.036)
O2': (7.601,53.372,56.833)
N1: (9.152,56.462,57.974)
N3: (9.964,57.277,60.054)
N4: (9.497,59.419,60.709)
C6: (8.597,57.683,57.700)
C5: (8.694,58.697,58.569)
O3': (5.807,54.911,55.320)
Image (generated by PyMOL):