Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2623:A2627
Extra
PDB:
ATOM 1 O3' A A2622 35.747 98.759 164.240 1.00 46.12 O
ATOM 2 P A A2623 36.395 97.305 164.260 1.00 42.64 P
ATOM 3 OP1 A A2623 35.513 96.436 165.071 1.00 44.00 O
ATOM 4 OP2 A A2623 37.787 97.499 164.653 1.00 41.61 O
ATOM 5 O5' A A2623 36.356 96.835 162.736 1.00 46.03 O
ATOM 6 C5' A A2623 35.109 96.797 161.986 1.00 47.29 C
ATOM 7 C4' A A2623 35.385 96.666 160.503 1.00 49.33 C
ATOM 8 O4' A A2623 36.130 97.821 160.037 1.00 49.84 O
ATOM 9 C3' A A2623 36.258 95.488 160.118 1.00 49.92 C
ATOM 10 O3' A A2623 35.469 94.297 160.056 1.00 51.30 O
ATOM 11 C2' A A2623 36.836 95.939 158.781 1.00 50.32 C
ATOM 12 O2' A A2623 35.905 95.817 157.727 1.00 52.17 O
ATOM 13 C1' A A2623 37.055 97.430 159.040 1.00 50.45 C
ATOM 14 N9 A A2623 38.399 97.756 159.512 1.00 52.20 N
ATOM 15 C8 A A2623 38.872 97.810 160.804 1.00 52.80 C
ATOM 16 N7 A A2623 40.152 98.091 160.885 1.00 52.97 N
ATOM 17 C5 A A2623 40.543 98.237 159.562 1.00 52.68 C
ATOM 18 C6 A A2623 41.780 98.525 158.977 1.00 53.13 C
ATOM 19 N6 A A2623 42.911 98.679 159.669 1.00 52.36 N
ATOM 20 N1 A A2623 41.824 98.636 157.637 1.00 53.06 N
ATOM 21 C2 A A2623 40.701 98.442 156.941 1.00 52.45 C
ATOM 22 N3 A A2623 39.481 98.140 157.375 1.00 51.54 N
ATOM 23 C4 A A2623 39.470 98.054 158.710 1.00 52.14 C
ATOM 24 P C A2624 36.137 92.871 160.390 1.00 53.59 P
ATOM 25 OP1 C A2624 37.133 92.609 159.338 1.00 53.19 O
ATOM 26 OP2 C A2624 35.088 91.847 160.679 1.00 52.88 O
ATOM 27 O5' C A2624 36.951 93.129 161.729 1.00 52.23 O
TER
ATOM 1 O3' C B2626 44.639 99.066 171.427 1.00 48.87 O
ATOM 2 P A B2627 44.750 100.549 170.835 1.00 52.87 P
ATOM 3 OP1 A B2627 45.476 101.438 171.791 1.00 52.90 O
ATOM 4 OP2 A B2627 43.384 100.914 170.399 1.00 51.27 O
ATOM 5 O5' A B2627 45.674 100.366 169.545 1.00 52.11 O
ATOM 6 C5' A B2627 47.083 100.086 169.690 1.00 50.87 C
ATOM 7 C4' A B2627 47.724 99.819 168.354 1.00 50.44 C
ATOM 8 O4' A B2627 47.114 98.661 167.742 1.00 50.61 O
ATOM 9 C3' A B2627 47.601 100.916 167.317 1.00 49.59 C
ATOM 10 O3' A B2627 48.603 101.908 167.521 1.00 48.44 O
ATOM 11 C2' A B2627 47.800 100.136 166.025 1.00 50.07 C
ATOM 12 O2' A B2627 49.156 99.798 165.800 1.00 49.82 O
ATOM 13 C1' A B2627 47.042 98.848 166.343 1.00 50.13 C
ATOM 14 N9 A B2627 45.631 98.924 165.979 1.00 50.47 N
ATOM 15 C8 A B2627 44.565 99.201 166.795 1.00 50.54 C
ATOM 16 N7 A B2627 43.414 99.212 166.173 1.00 51.22 N
ATOM 17 C5 A B2627 43.744 98.926 164.860 1.00 50.29 C
ATOM 18 C6 A B2627 42.971 98.815 163.710 1.00 50.68 C
ATOM 19 N6 A B2627 41.658 99.027 163.686 1.00 50.44 N
ATOM 20 N1 A B2627 43.599 98.497 162.562 1.00 52.28 N
ATOM 21 C2 A B2627 44.927 98.338 162.584 1.00 51.94 C
ATOM 22 N3 A B2627 45.769 98.444 163.603 1.00 51.25 N
ATOM 23 C4 A B2627 45.104 98.739 164.727 1.00 50.59 C
ATOM 24 P U B2628 48.269 103.436 167.206 1.00 48.80 P
ATOM 25 OP1 U B2628 49.502 104.238 167.413 1.00 47.59 O
ATOM 26 OP2 U B2628 47.027 103.787 167.942 1.00 49.07 O
ATOM 27 O5' U B2628 47.941 103.409 165.652 1.00 46.99 O
TER
ATOM 2 P A A2623 36.395 97.305 164.260 1.00 42.64 P
ATOM 3 OP1 A A2623 35.513 96.436 165.071 1.00 44.00 O
ATOM 4 OP2 A A2623 37.787 97.499 164.653 1.00 41.61 O
ATOM 5 O5' A A2623 36.356 96.835 162.736 1.00 46.03 O
ATOM 6 C5' A A2623 35.109 96.797 161.986 1.00 47.29 C
ATOM 7 C4' A A2623 35.385 96.666 160.503 1.00 49.33 C
ATOM 8 O4' A A2623 36.130 97.821 160.037 1.00 49.84 O
ATOM 9 C3' A A2623 36.258 95.488 160.118 1.00 49.92 C
ATOM 10 O3' A A2623 35.469 94.297 160.056 1.00 51.30 O
ATOM 11 C2' A A2623 36.836 95.939 158.781 1.00 50.32 C
ATOM 12 O2' A A2623 35.905 95.817 157.727 1.00 52.17 O
ATOM 13 C1' A A2623 37.055 97.430 159.040 1.00 50.45 C
ATOM 14 N9 A A2623 38.399 97.756 159.512 1.00 52.20 N
ATOM 15 C8 A A2623 38.872 97.810 160.804 1.00 52.80 C
ATOM 16 N7 A A2623 40.152 98.091 160.885 1.00 52.97 N
ATOM 17 C5 A A2623 40.543 98.237 159.562 1.00 52.68 C
ATOM 18 C6 A A2623 41.780 98.525 158.977 1.00 53.13 C
ATOM 19 N6 A A2623 42.911 98.679 159.669 1.00 52.36 N
ATOM 20 N1 A A2623 41.824 98.636 157.637 1.00 53.06 N
ATOM 21 C2 A A2623 40.701 98.442 156.941 1.00 52.45 C
ATOM 22 N3 A A2623 39.481 98.140 157.375 1.00 51.54 N
ATOM 23 C4 A A2623 39.470 98.054 158.710 1.00 52.14 C
ATOM 24 P C A2624 36.137 92.871 160.390 1.00 53.59 P
ATOM 25 OP1 C A2624 37.133 92.609 159.338 1.00 53.19 O
ATOM 26 OP2 C A2624 35.088 91.847 160.679 1.00 52.88 O
ATOM 27 O5' C A2624 36.951 93.129 161.729 1.00 52.23 O
TER
ATOM 1 O3' C B2626 44.639 99.066 171.427 1.00 48.87 O
ATOM 2 P A B2627 44.750 100.549 170.835 1.00 52.87 P
ATOM 3 OP1 A B2627 45.476 101.438 171.791 1.00 52.90 O
ATOM 4 OP2 A B2627 43.384 100.914 170.399 1.00 51.27 O
ATOM 5 O5' A B2627 45.674 100.366 169.545 1.00 52.11 O
ATOM 6 C5' A B2627 47.083 100.086 169.690 1.00 50.87 C
ATOM 7 C4' A B2627 47.724 99.819 168.354 1.00 50.44 C
ATOM 8 O4' A B2627 47.114 98.661 167.742 1.00 50.61 O
ATOM 9 C3' A B2627 47.601 100.916 167.317 1.00 49.59 C
ATOM 10 O3' A B2627 48.603 101.908 167.521 1.00 48.44 O
ATOM 11 C2' A B2627 47.800 100.136 166.025 1.00 50.07 C
ATOM 12 O2' A B2627 49.156 99.798 165.800 1.00 49.82 O
ATOM 13 C1' A B2627 47.042 98.848 166.343 1.00 50.13 C
ATOM 14 N9 A B2627 45.631 98.924 165.979 1.00 50.47 N
ATOM 15 C8 A B2627 44.565 99.201 166.795 1.00 50.54 C
ATOM 16 N7 A B2627 43.414 99.212 166.173 1.00 51.22 N
ATOM 17 C5 A B2627 43.744 98.926 164.860 1.00 50.29 C
ATOM 18 C6 A B2627 42.971 98.815 163.710 1.00 50.68 C
ATOM 19 N6 A B2627 41.658 99.027 163.686 1.00 50.44 N
ATOM 20 N1 A B2627 43.599 98.497 162.562 1.00 52.28 N
ATOM 21 C2 A B2627 44.927 98.338 162.584 1.00 51.94 C
ATOM 22 N3 A B2627 45.769 98.444 163.603 1.00 51.25 N
ATOM 23 C4 A B2627 45.104 98.739 164.727 1.00 50.59 C
ATOM 24 P U B2628 48.269 103.436 167.206 1.00 48.80 P
ATOM 25 OP1 U B2628 49.502 104.238 167.413 1.00 47.59 O
ATOM 26 OP2 U B2628 47.027 103.787 167.942 1.00 49.07 O
ATOM 27 O5' U B2628 47.941 103.409 165.652 1.00 46.99 O
TER
Atoms:
OP1: (35.513,96.436,165.071)
OP2: (37.787,97.499,164.653)
C3': (36.258,95.488,160.118)
C1': (37.055,97.430,159.040)
C5': (35.109,96.797,161.986)
O4': (36.130,97.821,160.037)
C8: (38.872,97.810,160.804)
O2': (35.905,95.817,157.727)
C6: (41.780,98.525,158.977)
C5: (40.543,98.237,159.562)
C4: (39.470,98.054,158.710)
P: (36.395,97.305,164.260)
C4': (35.385,96.666,160.503)
C2': (36.836,95.939,158.781)
C2: (40.701,98.442,156.941)
N1: (41.824,98.636,157.637)
N3: (39.481,98.140,157.375)
N6: (42.911,98.679,159.669)
N7: (40.152,98.091,160.885)
N9: (38.399,97.756,159.512)
O5': (36.356,96.835,162.736)
O3': (35.469,94.297,160.056)
OP2: (37.787,97.499,164.653)
C3': (36.258,95.488,160.118)
C1': (37.055,97.430,159.040)
C5': (35.109,96.797,161.986)
O4': (36.130,97.821,160.037)
C8: (38.872,97.810,160.804)
O2': (35.905,95.817,157.727)
C6: (41.780,98.525,158.977)
C5: (40.543,98.237,159.562)
C4: (39.470,98.054,158.710)
P: (36.395,97.305,164.260)
C4': (35.385,96.666,160.503)
C2': (36.836,95.939,158.781)
C2: (40.701,98.442,156.941)
N1: (41.824,98.636,157.637)
N3: (39.481,98.140,157.375)
N6: (42.911,98.679,159.669)
N7: (40.152,98.091,160.885)
N9: (38.399,97.756,159.512)
O5': (36.356,96.835,162.736)
O3': (35.469,94.297,160.056)
OP1: (45.476,101.438,171.791)
OP2: (43.384,100.914,170.399)
C3': (47.601,100.916,167.317)
C1': (47.042,98.848,166.343)
C5': (47.083,100.086,169.690)
O4': (47.114,98.661,167.742)
C8: (44.565,99.201,166.795)
O2': (49.156,99.798,165.800)
C6: (42.971,98.815,163.710)
C5: (43.744,98.926,164.860)
C4: (45.104,98.739,164.727)
P: (44.750,100.549,170.835)
C4': (47.724,99.819,168.354)
C2': (47.800,100.136,166.025)
C2: (44.927,98.338,162.584)
N1: (43.599,98.497,162.562)
N3: (45.769,98.444,163.603)
N6: (41.658,99.027,163.686)
N7: (43.414,99.212,166.173)
N9: (45.631,98.924,165.979)
O5': (45.674,100.366,169.545)
O3': (48.603,101.908,167.521)
OP2: (43.384,100.914,170.399)
C3': (47.601,100.916,167.317)
C1': (47.042,98.848,166.343)
C5': (47.083,100.086,169.690)
O4': (47.114,98.661,167.742)
C8: (44.565,99.201,166.795)
O2': (49.156,99.798,165.800)
C6: (42.971,98.815,163.710)
C5: (43.744,98.926,164.860)
C4: (45.104,98.739,164.727)
P: (44.750,100.549,170.835)
C4': (47.724,99.819,168.354)
C2': (47.800,100.136,166.025)
C2: (44.927,98.338,162.584)
N1: (43.599,98.497,162.562)
N3: (45.769,98.444,163.603)
N6: (41.658,99.027,163.686)
N7: (43.414,99.212,166.173)
N9: (45.631,98.924,165.979)
O5': (45.674,100.366,169.545)
O3': (48.603,101.908,167.521)
Image (generated by PyMOL):