Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.514 54.900 54.905 1.00 77.19 O
ATOM 2 P U A 701 4.072 55.271 55.507 1.00 78.50 P
ATOM 3 OP1 U A 701 3.039 54.646 54.648 1.00 78.58 O
ATOM 4 OP2 U A 701 4.031 56.730 55.753 1.00 78.96 O
ATOM 5 O5' U A 701 4.087 54.545 56.924 1.00 79.94 O
ATOM 6 C5' U A 701 2.909 54.464 57.740 1.00 80.86 C
ATOM 7 C4' U A 701 3.014 53.283 58.682 1.00 82.15 C
ATOM 8 O4' U A 701 2.986 52.050 57.910 1.00 82.96 O
ATOM 9 C3' U A 701 4.274 53.214 59.541 1.00 81.86 C
ATOM 10 O3' U A 701 3.950 52.628 60.796 1.00 83.27 O
ATOM 11 C2' U A 701 5.179 52.289 58.732 1.00 81.90 C
ATOM 12 O2' U A 701 6.143 51.628 59.526 1.00 80.20 O
ATOM 13 C1' U A 701 4.167 51.305 58.141 1.00 82.91 C
ATOM 14 N1 U A 701 4.571 50.696 56.859 1.00 84.58 N
ATOM 15 C2 U A 701 4.529 49.309 56.740 1.00 85.13 C
ATOM 16 O2 U A 701 4.176 48.569 57.642 1.00 87.00 O
ATOM 17 N3 U A 701 4.914 48.821 55.516 1.00 84.19 N
ATOM 18 C4 U A 701 5.323 49.550 54.421 1.00 83.92 C
ATOM 19 O4 U A 701 5.617 48.966 53.380 1.00 83.61 O
ATOM 20 C5 U A 701 5.340 50.964 54.618 1.00 84.35 C
ATOM 21 C6 U A 701 4.976 51.476 55.797 1.00 84.71 C
ATOM 22 P U A 702 3.550 53.570 62.038 1.00 84.47 P
ATOM 23 OP1 U A 702 3.065 52.704 63.138 1.00 85.73 O
ATOM 24 OP2 U A 702 2.669 54.649 61.520 1.00 83.78 O
ATOM 25 O5' U A 702 4.931 54.221 62.501 1.00 86.86 O
TER
ATOM 1 O3' G B 699 8.562 59.308 52.371 1.00 67.44 O
ATOM 2 P C B 700 7.123 59.088 53.056 1.00 68.26 P
ATOM 3 OP1 C B 700 6.201 58.730 51.955 1.00 67.82 O
ATOM 4 OP2 C B 700 6.787 60.231 53.945 1.00 67.56 O
ATOM 5 O5' C B 700 7.354 57.814 53.980 1.00 69.18 O
ATOM 6 C5' C B 700 7.789 56.565 53.414 1.00 72.96 C
ATOM 7 C4' C B 700 7.844 55.501 54.481 1.00 75.55 C
ATOM 8 O4' C B 700 9.005 55.700 55.331 1.00 77.12 O
ATOM 9 C3' C B 700 6.676 55.504 55.451 1.00 76.16 C
ATOM 10 O3' C B 700 5.514 54.900 54.905 1.00 77.19 O
ATOM 11 C2' C B 700 7.256 54.765 56.648 1.00 77.12 C
ATOM 12 O2' C B 700 7.272 53.361 56.492 1.00 77.39 O
ATOM 13 C1' C B 700 8.692 55.301 56.658 1.00 77.83 C
ATOM 14 N1 C B 700 8.850 56.463 57.556 1.00 78.80 N
ATOM 15 C2 C B 700 9.487 56.279 58.789 1.00 79.05 C
ATOM 16 O2 C B 700 9.944 55.162 59.068 1.00 79.69 O
ATOM 17 N3 C B 700 9.590 57.324 59.641 1.00 79.46 N
ATOM 18 C4 C B 700 9.097 58.517 59.298 1.00 80.10 C
ATOM 19 N4 C B 700 9.205 59.517 60.178 1.00 80.58 N
ATOM 20 C5 C B 700 8.468 58.739 58.038 1.00 79.52 C
ATOM 21 C6 C B 700 8.368 57.697 57.206 1.00 79.09 C
ATOM 22 P U B 701 4.072 55.271 55.507 1.00 78.50 P
ATOM 23 OP1 U B 701 3.039 54.646 54.648 1.00 78.58 O
ATOM 24 OP2 U B 701 4.031 56.730 55.753 1.00 78.96 O
ATOM 25 O5' U B 701 4.087 54.545 56.924 1.00 79.94 O
TER
ATOM 2 P U A 701 4.072 55.271 55.507 1.00 78.50 P
ATOM 3 OP1 U A 701 3.039 54.646 54.648 1.00 78.58 O
ATOM 4 OP2 U A 701 4.031 56.730 55.753 1.00 78.96 O
ATOM 5 O5' U A 701 4.087 54.545 56.924 1.00 79.94 O
ATOM 6 C5' U A 701 2.909 54.464 57.740 1.00 80.86 C
ATOM 7 C4' U A 701 3.014 53.283 58.682 1.00 82.15 C
ATOM 8 O4' U A 701 2.986 52.050 57.910 1.00 82.96 O
ATOM 9 C3' U A 701 4.274 53.214 59.541 1.00 81.86 C
ATOM 10 O3' U A 701 3.950 52.628 60.796 1.00 83.27 O
ATOM 11 C2' U A 701 5.179 52.289 58.732 1.00 81.90 C
ATOM 12 O2' U A 701 6.143 51.628 59.526 1.00 80.20 O
ATOM 13 C1' U A 701 4.167 51.305 58.141 1.00 82.91 C
ATOM 14 N1 U A 701 4.571 50.696 56.859 1.00 84.58 N
ATOM 15 C2 U A 701 4.529 49.309 56.740 1.00 85.13 C
ATOM 16 O2 U A 701 4.176 48.569 57.642 1.00 87.00 O
ATOM 17 N3 U A 701 4.914 48.821 55.516 1.00 84.19 N
ATOM 18 C4 U A 701 5.323 49.550 54.421 1.00 83.92 C
ATOM 19 O4 U A 701 5.617 48.966 53.380 1.00 83.61 O
ATOM 20 C5 U A 701 5.340 50.964 54.618 1.00 84.35 C
ATOM 21 C6 U A 701 4.976 51.476 55.797 1.00 84.71 C
ATOM 22 P U A 702 3.550 53.570 62.038 1.00 84.47 P
ATOM 23 OP1 U A 702 3.065 52.704 63.138 1.00 85.73 O
ATOM 24 OP2 U A 702 2.669 54.649 61.520 1.00 83.78 O
ATOM 25 O5' U A 702 4.931 54.221 62.501 1.00 86.86 O
TER
ATOM 1 O3' G B 699 8.562 59.308 52.371 1.00 67.44 O
ATOM 2 P C B 700 7.123 59.088 53.056 1.00 68.26 P
ATOM 3 OP1 C B 700 6.201 58.730 51.955 1.00 67.82 O
ATOM 4 OP2 C B 700 6.787 60.231 53.945 1.00 67.56 O
ATOM 5 O5' C B 700 7.354 57.814 53.980 1.00 69.18 O
ATOM 6 C5' C B 700 7.789 56.565 53.414 1.00 72.96 C
ATOM 7 C4' C B 700 7.844 55.501 54.481 1.00 75.55 C
ATOM 8 O4' C B 700 9.005 55.700 55.331 1.00 77.12 O
ATOM 9 C3' C B 700 6.676 55.504 55.451 1.00 76.16 C
ATOM 10 O3' C B 700 5.514 54.900 54.905 1.00 77.19 O
ATOM 11 C2' C B 700 7.256 54.765 56.648 1.00 77.12 C
ATOM 12 O2' C B 700 7.272 53.361 56.492 1.00 77.39 O
ATOM 13 C1' C B 700 8.692 55.301 56.658 1.00 77.83 C
ATOM 14 N1 C B 700 8.850 56.463 57.556 1.00 78.80 N
ATOM 15 C2 C B 700 9.487 56.279 58.789 1.00 79.05 C
ATOM 16 O2 C B 700 9.944 55.162 59.068 1.00 79.69 O
ATOM 17 N3 C B 700 9.590 57.324 59.641 1.00 79.46 N
ATOM 18 C4 C B 700 9.097 58.517 59.298 1.00 80.10 C
ATOM 19 N4 C B 700 9.205 59.517 60.178 1.00 80.58 N
ATOM 20 C5 C B 700 8.468 58.739 58.038 1.00 79.52 C
ATOM 21 C6 C B 700 8.368 57.697 57.206 1.00 79.09 C
ATOM 22 P U B 701 4.072 55.271 55.507 1.00 78.50 P
ATOM 23 OP1 U B 701 3.039 54.646 54.648 1.00 78.58 O
ATOM 24 OP2 U B 701 4.031 56.730 55.753 1.00 78.96 O
ATOM 25 O5' U B 701 4.087 54.545 56.924 1.00 79.94 O
TER
Atoms:
C4: (5.323,49.550,54.421)
N3: (4.914,48.821,55.516)
OP1: (3.039,54.646,54.648)
OP2: (4.031,56.730,55.753)
C2: (4.529,49.309,56.740)
C1': (4.167,51.305,58.141)
C3': (4.274,53.214,59.541)
O5': (4.087,54.545,56.924)
O4': (2.986,52.050,57.910)
C5': (2.909,54.464,57.740)
P: (4.072,55.271,55.507)
C4': (3.014,53.283,58.682)
C2': (5.179,52.289,58.732)
O2': (6.143,51.628,59.526)
N1: (4.571,50.696,56.859)
O4: (5.617,48.966,53.380)
O2: (4.176,48.569,57.642)
C6: (4.976,51.476,55.797)
C5: (5.340,50.964,54.618)
O3': (3.950,52.628,60.796)
N3: (4.914,48.821,55.516)
OP1: (3.039,54.646,54.648)
OP2: (4.031,56.730,55.753)
C2: (4.529,49.309,56.740)
C1': (4.167,51.305,58.141)
C3': (4.274,53.214,59.541)
O5': (4.087,54.545,56.924)
O4': (2.986,52.050,57.910)
C5': (2.909,54.464,57.740)
P: (4.072,55.271,55.507)
C4': (3.014,53.283,58.682)
C2': (5.179,52.289,58.732)
O2': (6.143,51.628,59.526)
N1: (4.571,50.696,56.859)
O4: (5.617,48.966,53.380)
O2: (4.176,48.569,57.642)
C6: (4.976,51.476,55.797)
C5: (5.340,50.964,54.618)
O3': (3.950,52.628,60.796)
C2: (9.487,56.279,58.789)
OP1: (6.201,58.730,51.955)
OP2: (6.787,60.231,53.945)
C4: (9.097,58.517,59.298)
O5': (7.354,57.814,53.980)
C3': (6.676,55.504,55.451)
C1': (8.692,55.301,56.658)
O4': (9.005,55.700,55.331)
C5': (7.789,56.565,53.414)
P: (7.123,59.088,53.056)
O2: (9.944,55.162,59.068)
C4': (7.844,55.501,54.481)
C2': (7.256,54.765,56.648)
O2': (7.272,53.361,56.492)
N1: (8.850,56.463,57.556)
N3: (9.590,57.324,59.641)
N4: (9.205,59.517,60.178)
C6: (8.368,57.697,57.206)
C5: (8.468,58.739,58.038)
O3': (5.514,54.900,54.905)
OP1: (6.201,58.730,51.955)
OP2: (6.787,60.231,53.945)
C4: (9.097,58.517,59.298)
O5': (7.354,57.814,53.980)
C3': (6.676,55.504,55.451)
C1': (8.692,55.301,56.658)
O4': (9.005,55.700,55.331)
C5': (7.789,56.565,53.414)
P: (7.123,59.088,53.056)
O2: (9.944,55.162,59.068)
C4': (7.844,55.501,54.481)
C2': (7.256,54.765,56.648)
O2': (7.272,53.361,56.492)
N1: (8.850,56.463,57.556)
N3: (9.590,57.324,59.641)
N4: (9.205,59.517,60.178)
C6: (8.368,57.697,57.206)
C5: (8.468,58.739,58.038)
O3': (5.514,54.900,54.905)
Image (generated by PyMOL):