Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0701:0700
Extra
PDB:
ATOM 1 O3' C A 700 5.472 54.655 54.927 1.00 65.82 O
ATOM 2 P U A 701 4.021 55.037 55.499 1.00 66.95 P
ATOM 3 OP1 U A 701 3.017 54.212 54.783 1.00 68.12 O
ATOM 4 OP2 U A 701 3.889 56.512 55.493 1.00 67.41 O
ATOM 5 O5' U A 701 4.081 54.565 57.017 1.00 67.04 O
ATOM 6 C5' U A 701 2.883 54.424 57.796 1.00 66.46 C
ATOM 7 C4' U A 701 2.970 53.186 58.657 1.00 67.08 C
ATOM 8 O4' U A 701 2.936 52.008 57.804 1.00 67.40 O
ATOM 9 C3' U A 701 4.223 53.054 59.519 1.00 67.24 C
ATOM 10 O3' U A 701 3.887 52.432 60.752 1.00 69.10 O
ATOM 11 C2' U A 701 5.114 52.140 58.682 1.00 66.66 C
ATOM 12 O2' U A 701 6.033 51.400 59.459 1.00 65.64 O
ATOM 13 C1' U A 701 4.085 51.215 58.034 1.00 67.34 C
ATOM 14 N1 U A 701 4.516 50.641 56.747 1.00 68.42 N
ATOM 15 C2 U A 701 4.652 49.261 56.655 1.00 68.67 C
ATOM 16 O2 U A 701 4.407 48.503 57.579 1.00 70.04 O
ATOM 17 N3 U A 701 5.080 48.799 55.433 1.00 67.83 N
ATOM 18 C4 U A 701 5.370 49.552 54.314 1.00 67.39 C
ATOM 19 O4 U A 701 5.764 48.992 53.290 1.00 65.51 O
ATOM 20 C5 U A 701 5.191 50.960 54.481 1.00 68.52 C
ATOM 21 C6 U A 701 4.783 51.445 55.659 1.00 69.09 C
ATOM 22 P U A 702 3.533 53.342 62.032 1.00 70.63 P
ATOM 23 OP1 U A 702 2.986 52.451 63.077 1.00 72.29 O
ATOM 24 OP2 U A 702 2.725 54.504 61.566 1.00 69.11 O
ATOM 25 O5' U A 702 4.944 53.876 62.542 1.00 72.68 O
TER
ATOM 1 O3' G B 699 8.337 59.174 52.300 1.00 58.09 O
ATOM 2 P C B 700 6.903 58.954 52.991 1.00 60.21 P
ATOM 3 OP1 C B 700 5.975 58.589 51.891 1.00 60.61 O
ATOM 4 OP2 C B 700 6.574 60.107 53.876 1.00 59.13 O
ATOM 5 O5' C B 700 7.143 57.683 53.918 1.00 60.17 O
ATOM 6 C5' C B 700 7.596 56.448 53.349 1.00 62.21 C
ATOM 7 C4' C B 700 7.742 55.395 54.417 1.00 63.62 C
ATOM 8 O4' C B 700 8.919 55.647 55.224 1.00 63.38 O
ATOM 9 C3' C B 700 6.620 55.316 55.436 1.00 64.41 C
ATOM 10 O3' C B 700 5.472 54.655 54.927 1.00 65.82 O
ATOM 11 C2' C B 700 7.286 54.553 56.573 1.00 64.02 C
ATOM 12 O2' C B 700 7.337 53.158 56.356 1.00 62.97 O
ATOM 13 C1' C B 700 8.702 55.140 56.532 1.00 63.52 C
ATOM 14 N1 C B 700 8.884 56.229 57.502 1.00 63.26 N
ATOM 15 C2 C B 700 9.568 55.958 58.690 1.00 63.29 C
ATOM 16 O2 C B 700 10.034 54.824 58.871 1.00 64.15 O
ATOM 17 N3 C B 700 9.709 56.933 59.609 1.00 63.24 N
ATOM 18 C4 C B 700 9.207 58.145 59.374 1.00 63.67 C
ATOM 19 N4 C B 700 9.363 59.075 60.317 1.00 64.12 N
ATOM 20 C5 C B 700 8.522 58.458 58.162 1.00 63.32 C
ATOM 21 C6 C B 700 8.386 57.480 57.263 1.00 62.99 C
ATOM 22 P U B 701 4.021 55.037 55.499 1.00 66.95 P
ATOM 23 OP1 U B 701 3.017 54.212 54.783 1.00 68.12 O
ATOM 24 OP2 U B 701 3.889 56.512 55.493 1.00 67.41 O
ATOM 25 O5' U B 701 4.081 54.565 57.017 1.00 67.04 O
TER
ATOM 2 P U A 701 4.021 55.037 55.499 1.00 66.95 P
ATOM 3 OP1 U A 701 3.017 54.212 54.783 1.00 68.12 O
ATOM 4 OP2 U A 701 3.889 56.512 55.493 1.00 67.41 O
ATOM 5 O5' U A 701 4.081 54.565 57.017 1.00 67.04 O
ATOM 6 C5' U A 701 2.883 54.424 57.796 1.00 66.46 C
ATOM 7 C4' U A 701 2.970 53.186 58.657 1.00 67.08 C
ATOM 8 O4' U A 701 2.936 52.008 57.804 1.00 67.40 O
ATOM 9 C3' U A 701 4.223 53.054 59.519 1.00 67.24 C
ATOM 10 O3' U A 701 3.887 52.432 60.752 1.00 69.10 O
ATOM 11 C2' U A 701 5.114 52.140 58.682 1.00 66.66 C
ATOM 12 O2' U A 701 6.033 51.400 59.459 1.00 65.64 O
ATOM 13 C1' U A 701 4.085 51.215 58.034 1.00 67.34 C
ATOM 14 N1 U A 701 4.516 50.641 56.747 1.00 68.42 N
ATOM 15 C2 U A 701 4.652 49.261 56.655 1.00 68.67 C
ATOM 16 O2 U A 701 4.407 48.503 57.579 1.00 70.04 O
ATOM 17 N3 U A 701 5.080 48.799 55.433 1.00 67.83 N
ATOM 18 C4 U A 701 5.370 49.552 54.314 1.00 67.39 C
ATOM 19 O4 U A 701 5.764 48.992 53.290 1.00 65.51 O
ATOM 20 C5 U A 701 5.191 50.960 54.481 1.00 68.52 C
ATOM 21 C6 U A 701 4.783 51.445 55.659 1.00 69.09 C
ATOM 22 P U A 702 3.533 53.342 62.032 1.00 70.63 P
ATOM 23 OP1 U A 702 2.986 52.451 63.077 1.00 72.29 O
ATOM 24 OP2 U A 702 2.725 54.504 61.566 1.00 69.11 O
ATOM 25 O5' U A 702 4.944 53.876 62.542 1.00 72.68 O
TER
ATOM 1 O3' G B 699 8.337 59.174 52.300 1.00 58.09 O
ATOM 2 P C B 700 6.903 58.954 52.991 1.00 60.21 P
ATOM 3 OP1 C B 700 5.975 58.589 51.891 1.00 60.61 O
ATOM 4 OP2 C B 700 6.574 60.107 53.876 1.00 59.13 O
ATOM 5 O5' C B 700 7.143 57.683 53.918 1.00 60.17 O
ATOM 6 C5' C B 700 7.596 56.448 53.349 1.00 62.21 C
ATOM 7 C4' C B 700 7.742 55.395 54.417 1.00 63.62 C
ATOM 8 O4' C B 700 8.919 55.647 55.224 1.00 63.38 O
ATOM 9 C3' C B 700 6.620 55.316 55.436 1.00 64.41 C
ATOM 10 O3' C B 700 5.472 54.655 54.927 1.00 65.82 O
ATOM 11 C2' C B 700 7.286 54.553 56.573 1.00 64.02 C
ATOM 12 O2' C B 700 7.337 53.158 56.356 1.00 62.97 O
ATOM 13 C1' C B 700 8.702 55.140 56.532 1.00 63.52 C
ATOM 14 N1 C B 700 8.884 56.229 57.502 1.00 63.26 N
ATOM 15 C2 C B 700 9.568 55.958 58.690 1.00 63.29 C
ATOM 16 O2 C B 700 10.034 54.824 58.871 1.00 64.15 O
ATOM 17 N3 C B 700 9.709 56.933 59.609 1.00 63.24 N
ATOM 18 C4 C B 700 9.207 58.145 59.374 1.00 63.67 C
ATOM 19 N4 C B 700 9.363 59.075 60.317 1.00 64.12 N
ATOM 20 C5 C B 700 8.522 58.458 58.162 1.00 63.32 C
ATOM 21 C6 C B 700 8.386 57.480 57.263 1.00 62.99 C
ATOM 22 P U B 701 4.021 55.037 55.499 1.00 66.95 P
ATOM 23 OP1 U B 701 3.017 54.212 54.783 1.00 68.12 O
ATOM 24 OP2 U B 701 3.889 56.512 55.493 1.00 67.41 O
ATOM 25 O5' U B 701 4.081 54.565 57.017 1.00 67.04 O
TER
Atoms:
C4: (5.370,49.552,54.314)
N3: (5.080,48.799,55.433)
OP1: (3.017,54.212,54.783)
OP2: (3.889,56.512,55.493)
C2: (4.652,49.261,56.655)
C1': (4.085,51.215,58.034)
C3': (4.223,53.054,59.519)
O5': (4.081,54.565,57.017)
O4': (2.936,52.008,57.804)
C5': (2.883,54.424,57.796)
P: (4.021,55.037,55.499)
C4': (2.970,53.186,58.657)
C2': (5.114,52.140,58.682)
O2': (6.033,51.400,59.459)
N1: (4.516,50.641,56.747)
O4: (5.764,48.992,53.290)
O2: (4.407,48.503,57.579)
C6: (4.783,51.445,55.659)
C5: (5.191,50.960,54.481)
O3': (3.887,52.432,60.752)
N3: (5.080,48.799,55.433)
OP1: (3.017,54.212,54.783)
OP2: (3.889,56.512,55.493)
C2: (4.652,49.261,56.655)
C1': (4.085,51.215,58.034)
C3': (4.223,53.054,59.519)
O5': (4.081,54.565,57.017)
O4': (2.936,52.008,57.804)
C5': (2.883,54.424,57.796)
P: (4.021,55.037,55.499)
C4': (2.970,53.186,58.657)
C2': (5.114,52.140,58.682)
O2': (6.033,51.400,59.459)
N1: (4.516,50.641,56.747)
O4: (5.764,48.992,53.290)
O2: (4.407,48.503,57.579)
C6: (4.783,51.445,55.659)
C5: (5.191,50.960,54.481)
O3': (3.887,52.432,60.752)
C2: (9.568,55.958,58.690)
OP1: (5.975,58.589,51.891)
OP2: (6.574,60.107,53.876)
C4: (9.207,58.145,59.374)
O5': (7.143,57.683,53.918)
C3': (6.620,55.316,55.436)
C1': (8.702,55.140,56.532)
O4': (8.919,55.647,55.224)
C5': (7.596,56.448,53.349)
P: (6.903,58.954,52.991)
O2: (10.034,54.824,58.871)
C4': (7.742,55.395,54.417)
C2': (7.286,54.553,56.573)
O2': (7.337,53.158,56.356)
N1: (8.884,56.229,57.502)
N3: (9.709,56.933,59.609)
N4: (9.363,59.075,60.317)
C6: (8.386,57.480,57.263)
C5: (8.522,58.458,58.162)
O3': (5.472,54.655,54.927)
OP1: (5.975,58.589,51.891)
OP2: (6.574,60.107,53.876)
C4: (9.207,58.145,59.374)
O5': (7.143,57.683,53.918)
C3': (6.620,55.316,55.436)
C1': (8.702,55.140,56.532)
O4': (8.919,55.647,55.224)
C5': (7.596,56.448,53.349)
P: (6.903,58.954,52.991)
O2: (10.034,54.824,58.871)
C4': (7.742,55.395,54.417)
C2': (7.286,54.553,56.573)
O2': (7.337,53.158,56.356)
N1: (8.884,56.229,57.502)
N3: (9.709,56.933,59.609)
N4: (9.363,59.075,60.317)
C6: (8.386,57.480,57.263)
C5: (8.522,58.458,58.162)
O3': (5.472,54.655,54.927)
Image (generated by PyMOL):