ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A36:A35

Extra

PDB:
ATOM 1 O3' C A 35 -7.276 -21.445 8.360 1.00 41.59 O
ATOM 2 P U A 36 -7.423 -22.670 9.341 1.00 43.07 P
ATOM 3 OP1 U A 36 -6.051 -22.576 9.907 1.00 43.80 O
ATOM 4 OP2 U A 36 -7.897 -23.910 8.729 1.00 42.15 O
ATOM 5 O5' U A 36 -8.507 -22.293 10.428 1.00 41.25 O
ATOM 6 C5' U A 36 -9.150 -21.090 10.378 1.00 35.71 C
ATOM 7 C4' U A 36 -9.242 -20.484 11.764 1.00 32.51 C
ATOM 8 O4' U A 36 -8.449 -19.269 11.719 1.00 29.83 O
ATOM 9 C3' U A 36 -10.669 -20.022 12.003 1.00 30.50 C
ATOM 10 O3' U A 36 -11.442 -20.969 12.733 1.00 30.67 O
ATOM 11 C2' U A 36 -10.547 -18.578 12.502 1.00 28.47 C
ATOM 12 O2' U A 36 -10.289 -18.392 13.874 1.00 28.47 O
ATOM 13 C1' U A 36 -9.300 -18.121 11.747 1.00 28.00 C
ATOM 14 N1 U A 36 -9.506 -17.613 10.377 1.00 25.37 N
ATOM 15 C2 U A 36 -10.063 -16.322 10.232 1.00 24.84 C
ATOM 16 O2 U A 36 -10.479 -15.666 11.186 1.00 22.50 O
ATOM 17 N3 U A 36 -10.148 -15.852 8.942 1.00 22.56 N
ATOM 18 C4 U A 36 -9.777 -16.539 7.795 1.00 24.59 C
ATOM 19 O4 U A 36 -9.979 -16.037 6.683 1.00 22.87 O
ATOM 20 C5 U A 36 -9.259 -17.864 8.035 1.00 23.55 C
ATOM 21 C6 U A 36 -9.153 -18.339 9.273 1.00 25.25 C
ATOM 22 P A A 37 -12.919 -21.317 12.227 1.00 30.31 P
ATOM 23 OP1 A A 37 -13.496 -22.226 13.264 1.00 29.60 O
ATOM 24 OP2 A A 37 -12.989 -21.715 10.809 1.00 28.69 O
ATOM 25 O5' A A 37 -13.640 -19.874 12.337 1.00 27.35 O
TER

ATOM 1 O3' U B 34 -5.294 -18.705 4.172 1.00 37.85 O
ATOM 2 P C B 35 -6.501 -19.702 4.494 1.00 41.60 P
ATOM 3 OP1 C B 35 -6.308 -20.932 3.669 1.00 41.15 O
ATOM 4 OP2 C B 35 -7.799 -18.970 4.443 1.00 41.06 O
ATOM 5 O5' C B 35 -6.266 -20.152 5.978 1.00 41.54 O
ATOM 6 C5' C B 35 -5.074 -20.813 6.359 1.00 40.98 C
ATOM 7 C4' C B 35 -4.891 -20.645 7.823 1.00 40.31 C
ATOM 8 O4' C B 35 -4.293 -19.329 8.059 1.00 39.10 O
ATOM 9 C3' C B 35 -6.200 -20.474 8.546 1.00 40.25 C
ATOM 10 O3' C B 35 -7.276 -21.445 8.360 1.00 41.59 O
ATOM 11 C2' C B 35 -5.733 -19.826 9.836 1.00 39.32 C
ATOM 12 O2' C B 35 -4.890 -20.587 10.673 1.00 40.75 O
ATOM 13 C1' C B 35 -4.834 -18.751 9.244 1.00 37.45 C
ATOM 14 N1 C B 35 -5.567 -17.520 8.895 1.00 34.48 N
ATOM 15 C2 C B 35 -6.021 -16.721 9.942 1.00 33.03 C
ATOM 16 O2 C B 35 -5.736 -17.060 11.085 1.00 32.04 O
ATOM 17 N3 C B 35 -6.730 -15.594 9.670 1.00 31.23 N
ATOM 18 C4 C B 35 -6.947 -15.231 8.401 1.00 31.53 C
ATOM 19 N4 C B 35 -7.595 -14.080 8.170 1.00 29.28 N
ATOM 20 C5 C B 35 -6.486 -16.028 7.298 1.00 31.93 C
ATOM 21 C6 C B 35 -5.805 -17.157 7.594 1.00 33.73 C
ATOM 22 P U B 36 -7.423 -22.670 9.341 1.00 43.07 P
ATOM 23 OP1 U B 36 -6.051 -22.576 9.907 1.00 43.80 O
ATOM 24 OP2 U B 36 -7.897 -23.910 8.729 1.00 42.15 O
ATOM 25 O5' U B 36 -8.507 -22.293 10.428 1.00 41.25 O
TER

Atoms:
C4: (-9.777,-16.539,7.795)
N3: (-10.148,-15.852,8.942)
OP1: (-6.051,-22.576,9.907)
OP2: (-7.897,-23.910,8.729)
C2: (-10.063,-16.322,10.232)
C1': (-9.300,-18.121,11.747)
C3': (-10.669,-20.022,12.003)
O5': (-8.507,-22.293,10.428)
O4': (-8.449,-19.269,11.719)
C5': (-9.150,-21.090,10.378)
P: (-7.423,-22.670,9.341)
C4': (-9.242,-20.484,11.764)
C2': (-10.547,-18.578,12.502)
O2': (-10.289,-18.392,13.874)
N1: (-9.506,-17.613,10.377)
O4: (-9.979,-16.037,6.683)
O2: (-10.479,-15.666,11.186)
C6: (-9.153,-18.339,9.273)
C5: (-9.259,-17.864,8.035)
O3': (-11.442,-20.969,12.733)
C2: (-6.021,-16.721,9.942)
OP1: (-6.308,-20.932,3.669)
OP2: (-7.799,-18.970,4.443)
C4: (-6.947,-15.231,8.401)
O5': (-6.266,-20.152,5.978)
C3': (-6.200,-20.474,8.546)
C1': (-4.834,-18.751,9.244)
O4': (-4.293,-19.329,8.059)
C5': (-5.074,-20.813,6.359)
P: (-6.501,-19.702,4.494)
O2: (-5.736,-17.060,11.085)
C4': (-4.891,-20.645,7.823)
C2': (-5.733,-19.826,9.836)
O2': (-4.890,-20.587,10.673)
N1: (-5.567,-17.520,8.895)
N3: (-6.730,-15.594,9.670)
N4: (-7.595,-14.080,8.170)
C6: (-5.805,-17.157,7.594)
C5: (-6.486,-16.028,7.298)
O3': (-7.276,-21.445,8.360)
Image (generated by PyMOL):
PyMOL image
show in jmol