Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2339:A2338
Extra
PDB:
ATOM 1 O3' C A2338 -51.756 101.749 162.192 1.00 27.43 O
ATOM 2 P U A2339 -52.503 100.345 161.959 1.00 58.40 P
ATOM 3 OP1 U A2339 -51.889 99.712 160.769 1.00 23.53 O
ATOM 4 OP2 U A2339 -53.969 100.581 161.991 1.00 23.53 O
ATOM 5 O5' U A2339 -52.086 99.486 163.232 1.00 18.74 O
ATOM 6 C5' U A2339 -50.755 98.942 163.343 1.00 18.74 C
ATOM 7 C4' U A2339 -50.533 98.332 164.713 1.00 18.74 C
ATOM 8 O4' U A2339 -50.530 99.382 165.707 1.00 18.74 O
ATOM 9 C3' U A2339 -51.578 97.337 165.210 1.00 18.74 C
ATOM 10 O3' U A2339 -51.393 96.003 164.725 1.00 18.74 O
ATOM 11 C2' U A2339 -51.426 97.429 166.724 1.00 18.74 C
ATOM 12 O2' U A2339 -50.343 96.679 167.247 1.00 18.74 O
ATOM 13 C1' U A2339 -51.126 98.912 166.903 1.00 18.74 C
ATOM 14 N1 U A2339 -52.355 99.683 167.148 1.00 19.00 N
ATOM 15 C2 U A2339 -52.987 99.510 168.365 1.00 19.00 C
ATOM 16 O2 U A2339 -52.581 98.726 169.217 1.00 19.00 O
ATOM 17 N3 U A2339 -54.108 100.276 168.545 1.00 19.00 N
ATOM 18 C4 U A2339 -54.653 101.164 167.652 1.00 19.00 C
ATOM 19 O4 U A2339 -55.668 101.786 167.958 1.00 19.00 O
ATOM 20 C5 U A2339 -53.955 101.272 166.416 1.00 19.00 C
ATOM 21 C6 U A2339 -52.860 100.549 166.211 1.00 19.00 C
ATOM 22 P C A2340 -52.665 95.020 164.621 1.00 45.86 P
ATOM 23 OP1 C A2340 -52.178 93.720 164.103 1.00 78.05 O
ATOM 24 OP2 C A2340 -53.763 95.735 163.909 1.00 78.24 O
ATOM 25 O5' C A2340 -53.121 94.840 166.134 1.00 26.64 O
TER
ATOM 1 O3' U B2337 -55.555 106.440 161.037 1.00 35.48 O
ATOM 2 P C B2338 -55.833 104.865 161.179 1.00 54.47 P
ATOM 3 OP1 C B2338 -55.818 104.251 159.824 1.00 44.23 O
ATOM 4 OP2 C B2338 -57.029 104.702 162.050 1.00 44.23 O
ATOM 5 O5' C B2338 -54.558 104.323 161.966 1.00 27.43 O
ATOM 6 C5' C B2338 -53.240 104.489 161.419 1.00 27.43 C
ATOM 7 C4' C B2338 -52.196 104.106 162.437 1.00 27.43 C
ATOM 8 O4' C B2338 -52.253 105.005 163.567 1.00 27.43 O
ATOM 9 C3' C B2338 -52.340 102.726 163.048 1.00 27.43 C
ATOM 10 O3' C B2338 -51.756 101.749 162.192 1.00 27.43 O
ATOM 11 C2' C B2338 -51.590 102.869 164.367 1.00 27.43 C
ATOM 12 O2' C B2338 -50.192 102.768 164.231 1.00 27.43 O
ATOM 13 C1' C B2338 -51.888 104.314 164.743 1.00 27.43 C
ATOM 14 N1 C B2338 -52.963 104.446 165.733 1.00 12.21 N
ATOM 15 C2 C B2338 -52.677 104.165 167.074 1.00 12.21 C
ATOM 16 O2 C B2338 -51.530 103.803 167.381 1.00 12.21 O
ATOM 17 N3 C B2338 -53.651 104.297 168.000 1.00 12.21 N
ATOM 18 C4 C B2338 -54.864 104.700 167.632 1.00 12.21 C
ATOM 19 N4 C B2338 -55.782 104.844 168.576 1.00 12.21 N
ATOM 20 C5 C B2338 -55.186 104.982 166.276 1.00 12.21 C
ATOM 21 C6 C B2338 -54.215 104.842 165.366 1.00 12.21 C
ATOM 22 P U B2339 -52.503 100.345 161.959 1.00 58.40 P
ATOM 23 OP1 U B2339 -51.889 99.712 160.769 1.00 23.53 O
ATOM 24 OP2 U B2339 -53.969 100.581 161.991 1.00 23.53 O
ATOM 25 O5' U B2339 -52.086 99.486 163.232 1.00 18.74 O
TER
ATOM 2 P U A2339 -52.503 100.345 161.959 1.00 58.40 P
ATOM 3 OP1 U A2339 -51.889 99.712 160.769 1.00 23.53 O
ATOM 4 OP2 U A2339 -53.969 100.581 161.991 1.00 23.53 O
ATOM 5 O5' U A2339 -52.086 99.486 163.232 1.00 18.74 O
ATOM 6 C5' U A2339 -50.755 98.942 163.343 1.00 18.74 C
ATOM 7 C4' U A2339 -50.533 98.332 164.713 1.00 18.74 C
ATOM 8 O4' U A2339 -50.530 99.382 165.707 1.00 18.74 O
ATOM 9 C3' U A2339 -51.578 97.337 165.210 1.00 18.74 C
ATOM 10 O3' U A2339 -51.393 96.003 164.725 1.00 18.74 O
ATOM 11 C2' U A2339 -51.426 97.429 166.724 1.00 18.74 C
ATOM 12 O2' U A2339 -50.343 96.679 167.247 1.00 18.74 O
ATOM 13 C1' U A2339 -51.126 98.912 166.903 1.00 18.74 C
ATOM 14 N1 U A2339 -52.355 99.683 167.148 1.00 19.00 N
ATOM 15 C2 U A2339 -52.987 99.510 168.365 1.00 19.00 C
ATOM 16 O2 U A2339 -52.581 98.726 169.217 1.00 19.00 O
ATOM 17 N3 U A2339 -54.108 100.276 168.545 1.00 19.00 N
ATOM 18 C4 U A2339 -54.653 101.164 167.652 1.00 19.00 C
ATOM 19 O4 U A2339 -55.668 101.786 167.958 1.00 19.00 O
ATOM 20 C5 U A2339 -53.955 101.272 166.416 1.00 19.00 C
ATOM 21 C6 U A2339 -52.860 100.549 166.211 1.00 19.00 C
ATOM 22 P C A2340 -52.665 95.020 164.621 1.00 45.86 P
ATOM 23 OP1 C A2340 -52.178 93.720 164.103 1.00 78.05 O
ATOM 24 OP2 C A2340 -53.763 95.735 163.909 1.00 78.24 O
ATOM 25 O5' C A2340 -53.121 94.840 166.134 1.00 26.64 O
TER
ATOM 1 O3' U B2337 -55.555 106.440 161.037 1.00 35.48 O
ATOM 2 P C B2338 -55.833 104.865 161.179 1.00 54.47 P
ATOM 3 OP1 C B2338 -55.818 104.251 159.824 1.00 44.23 O
ATOM 4 OP2 C B2338 -57.029 104.702 162.050 1.00 44.23 O
ATOM 5 O5' C B2338 -54.558 104.323 161.966 1.00 27.43 O
ATOM 6 C5' C B2338 -53.240 104.489 161.419 1.00 27.43 C
ATOM 7 C4' C B2338 -52.196 104.106 162.437 1.00 27.43 C
ATOM 8 O4' C B2338 -52.253 105.005 163.567 1.00 27.43 O
ATOM 9 C3' C B2338 -52.340 102.726 163.048 1.00 27.43 C
ATOM 10 O3' C B2338 -51.756 101.749 162.192 1.00 27.43 O
ATOM 11 C2' C B2338 -51.590 102.869 164.367 1.00 27.43 C
ATOM 12 O2' C B2338 -50.192 102.768 164.231 1.00 27.43 O
ATOM 13 C1' C B2338 -51.888 104.314 164.743 1.00 27.43 C
ATOM 14 N1 C B2338 -52.963 104.446 165.733 1.00 12.21 N
ATOM 15 C2 C B2338 -52.677 104.165 167.074 1.00 12.21 C
ATOM 16 O2 C B2338 -51.530 103.803 167.381 1.00 12.21 O
ATOM 17 N3 C B2338 -53.651 104.297 168.000 1.00 12.21 N
ATOM 18 C4 C B2338 -54.864 104.700 167.632 1.00 12.21 C
ATOM 19 N4 C B2338 -55.782 104.844 168.576 1.00 12.21 N
ATOM 20 C5 C B2338 -55.186 104.982 166.276 1.00 12.21 C
ATOM 21 C6 C B2338 -54.215 104.842 165.366 1.00 12.21 C
ATOM 22 P U B2339 -52.503 100.345 161.959 1.00 58.40 P
ATOM 23 OP1 U B2339 -51.889 99.712 160.769 1.00 23.53 O
ATOM 24 OP2 U B2339 -53.969 100.581 161.991 1.00 23.53 O
ATOM 25 O5' U B2339 -52.086 99.486 163.232 1.00 18.74 O
TER
Atoms:
C4: (-54.653,101.164,167.652)
N3: (-54.108,100.276,168.545)
OP1: (-51.889,99.712,160.769)
OP2: (-53.969,100.581,161.991)
C2: (-52.987,99.510,168.365)
C1': (-51.126,98.912,166.903)
C3': (-51.578,97.337,165.210)
O5': (-52.086,99.486,163.232)
O4': (-50.530,99.382,165.707)
C5': (-50.755,98.942,163.343)
P: (-52.503,100.345,161.959)
C4': (-50.533,98.332,164.713)
C2': (-51.426,97.429,166.724)
O2': (-50.343,96.679,167.247)
N1: (-52.355,99.683,167.148)
O4: (-55.668,101.786,167.958)
O2: (-52.581,98.726,169.217)
C6: (-52.860,100.549,166.211)
C5: (-53.955,101.272,166.416)
O3': (-51.393,96.003,164.725)
N3: (-54.108,100.276,168.545)
OP1: (-51.889,99.712,160.769)
OP2: (-53.969,100.581,161.991)
C2: (-52.987,99.510,168.365)
C1': (-51.126,98.912,166.903)
C3': (-51.578,97.337,165.210)
O5': (-52.086,99.486,163.232)
O4': (-50.530,99.382,165.707)
C5': (-50.755,98.942,163.343)
P: (-52.503,100.345,161.959)
C4': (-50.533,98.332,164.713)
C2': (-51.426,97.429,166.724)
O2': (-50.343,96.679,167.247)
N1: (-52.355,99.683,167.148)
O4: (-55.668,101.786,167.958)
O2: (-52.581,98.726,169.217)
C6: (-52.860,100.549,166.211)
C5: (-53.955,101.272,166.416)
O3': (-51.393,96.003,164.725)
C2: (-52.677,104.165,167.074)
OP1: (-55.818,104.251,159.824)
OP2: (-57.029,104.702,162.050)
C4: (-54.864,104.700,167.632)
O5': (-54.558,104.323,161.966)
C3': (-52.340,102.726,163.048)
C1': (-51.888,104.314,164.743)
O4': (-52.253,105.005,163.567)
C5': (-53.240,104.489,161.419)
P: (-55.833,104.865,161.179)
O2: (-51.530,103.803,167.381)
C4': (-52.196,104.106,162.437)
C2': (-51.590,102.869,164.367)
O2': (-50.192,102.768,164.231)
N1: (-52.963,104.446,165.733)
N3: (-53.651,104.297,168.000)
N4: (-55.782,104.844,168.576)
C6: (-54.215,104.842,165.366)
C5: (-55.186,104.982,166.276)
O3': (-51.756,101.749,162.192)
OP1: (-55.818,104.251,159.824)
OP2: (-57.029,104.702,162.050)
C4: (-54.864,104.700,167.632)
O5': (-54.558,104.323,161.966)
C3': (-52.340,102.726,163.048)
C1': (-51.888,104.314,164.743)
O4': (-52.253,105.005,163.567)
C5': (-53.240,104.489,161.419)
P: (-55.833,104.865,161.179)
O2: (-51.530,103.803,167.381)
C4': (-52.196,104.106,162.437)
C2': (-51.590,102.869,164.367)
O2': (-50.192,102.768,164.231)
N1: (-52.963,104.446,165.733)
N3: (-53.651,104.297,168.000)
N4: (-55.782,104.844,168.576)
C6: (-54.215,104.842,165.366)
C5: (-55.186,104.982,166.276)
O3': (-51.756,101.749,162.192)
Image (generated by PyMOL):