Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A420:A401
Extra
PDB:
ATOM 1 O3' U A 419 109.826 41.201 77.702 1.00159.73 O
ATOM 2 P A A 420 108.895 40.489 76.608 1.00125.85 P
ATOM 3 OP1 A A 420 108.797 41.416 75.448 1.00134.78 O
ATOM 4 OP2 A A 420 107.651 40.072 77.305 1.00127.99 O
ATOM 5 O5' A A 420 109.743 39.211 76.206 1.00102.66 O
ATOM 6 C5' A A 420 110.398 38.453 77.192 1.00104.19 C
ATOM 7 C4' A A 420 110.863 37.142 76.645 1.00103.87 C
ATOM 8 O4' A A 420 111.860 37.362 75.619 1.00105.01 O
ATOM 9 C3' A A 420 111.556 36.229 77.634 1.00113.97 C
ATOM 10 O3' A A 420 110.648 35.540 78.480 1.00116.27 O
ATOM 11 C2' A A 420 112.373 35.317 76.727 1.00111.33 C
ATOM 12 O2' A A 420 111.556 34.298 76.172 1.00117.53 O
ATOM 13 C1' A A 420 112.773 36.280 75.606 1.00111.95 C
ATOM 14 N9 A A 420 114.139 36.800 75.790 1.00112.30 N
ATOM 15 C8 A A 420 114.552 38.100 75.930 1.00120.30 C
ATOM 16 N7 A A 420 115.849 38.225 76.086 1.00124.30 N
ATOM 17 C5 A A 420 116.319 36.919 76.046 1.00120.02 C
ATOM 18 C6 A A 420 117.614 36.371 76.157 1.00123.25 C
ATOM 19 N6 A A 420 118.703 37.127 76.333 1.00125.34 N
ATOM 20 N1 A A 420 117.751 35.021 76.082 1.00119.79 N
ATOM 21 C2 A A 420 116.642 34.291 75.907 1.00119.23 C
ATOM 22 N3 A A 420 115.371 34.698 75.788 1.00116.75 N
ATOM 23 C4 A A 420 115.275 36.035 75.865 1.00112.93 C
ATOM 24 P A A 421 110.960 35.406 80.048 1.00129.52 P
ATOM 25 OP1 A A 421 109.904 34.551 80.631 1.00131.33 O
ATOM 26 OP2 A A 421 111.130 36.785 80.578 1.00143.52 O
ATOM 27 O5' A A 421 112.362 34.630 80.055 1.00118.90 O
TER
ATOM 1 O3' G B 400 117.326 45.644 83.698 1.00139.54 O
ATOM 2 P A B 401 117.672 46.204 82.240 1.00154.70 P
ATOM 3 OP1 A B 401 118.075 47.624 82.391 1.00160.61 O
ATOM 4 OP2 A B 401 116.525 45.883 81.369 1.00162.16 O
ATOM 5 O5' A B 401 118.932 45.328 81.828 1.00144.24 O
ATOM 6 C5' A B 401 120.195 45.531 82.440 1.00145.41 C
ATOM 7 C4' A B 401 121.302 45.449 81.426 1.00150.23 C
ATOM 8 O4' A B 401 121.289 44.133 80.814 1.00148.46 O
ATOM 9 C3' A B 401 121.194 46.418 80.250 1.00151.89 C
ATOM 10 O3' A B 401 121.725 47.704 80.534 1.00155.33 O
ATOM 11 C2' A B 401 121.925 45.683 79.136 1.00149.85 C
ATOM 12 O2' A B 401 123.334 45.807 79.286 1.00139.19 O
ATOM 13 C1' A B 401 121.526 44.235 79.428 1.00153.01 C
ATOM 14 N9 A B 401 120.283 43.847 78.719 1.00157.73 N
ATOM 15 C8 A B 401 119.194 44.636 78.403 1.00155.11 C
ATOM 16 N7 A B 401 118.233 44.007 77.764 1.00147.91 N
ATOM 17 C5 A B 401 118.719 42.712 77.653 1.00152.20 C
ATOM 18 C6 A B 401 118.174 41.553 77.075 1.00154.13 C
ATOM 19 N6 A B 401 116.977 41.517 76.483 1.00150.55 N
ATOM 20 N1 A B 401 118.912 40.421 77.132 1.00155.45 N
ATOM 21 C2 A B 401 120.115 40.460 77.725 1.00155.46 C
ATOM 22 N3 A B 401 120.734 41.487 78.303 1.00153.69 N
ATOM 23 C4 A B 401 119.972 42.595 78.236 1.00153.12 C
ATOM 24 P A B 402 120.933 49.031 80.078 1.00166.28 P
ATOM 25 OP1 A B 402 121.504 50.163 80.846 1.00183.58 O
ATOM 26 OP2 A B 402 119.478 48.745 80.202 1.00168.71 O
ATOM 27 O5' A B 402 121.332 49.168 78.544 1.00138.85 O
TER
ATOM 2 P A A 420 108.895 40.489 76.608 1.00125.85 P
ATOM 3 OP1 A A 420 108.797 41.416 75.448 1.00134.78 O
ATOM 4 OP2 A A 420 107.651 40.072 77.305 1.00127.99 O
ATOM 5 O5' A A 420 109.743 39.211 76.206 1.00102.66 O
ATOM 6 C5' A A 420 110.398 38.453 77.192 1.00104.19 C
ATOM 7 C4' A A 420 110.863 37.142 76.645 1.00103.87 C
ATOM 8 O4' A A 420 111.860 37.362 75.619 1.00105.01 O
ATOM 9 C3' A A 420 111.556 36.229 77.634 1.00113.97 C
ATOM 10 O3' A A 420 110.648 35.540 78.480 1.00116.27 O
ATOM 11 C2' A A 420 112.373 35.317 76.727 1.00111.33 C
ATOM 12 O2' A A 420 111.556 34.298 76.172 1.00117.53 O
ATOM 13 C1' A A 420 112.773 36.280 75.606 1.00111.95 C
ATOM 14 N9 A A 420 114.139 36.800 75.790 1.00112.30 N
ATOM 15 C8 A A 420 114.552 38.100 75.930 1.00120.30 C
ATOM 16 N7 A A 420 115.849 38.225 76.086 1.00124.30 N
ATOM 17 C5 A A 420 116.319 36.919 76.046 1.00120.02 C
ATOM 18 C6 A A 420 117.614 36.371 76.157 1.00123.25 C
ATOM 19 N6 A A 420 118.703 37.127 76.333 1.00125.34 N
ATOM 20 N1 A A 420 117.751 35.021 76.082 1.00119.79 N
ATOM 21 C2 A A 420 116.642 34.291 75.907 1.00119.23 C
ATOM 22 N3 A A 420 115.371 34.698 75.788 1.00116.75 N
ATOM 23 C4 A A 420 115.275 36.035 75.865 1.00112.93 C
ATOM 24 P A A 421 110.960 35.406 80.048 1.00129.52 P
ATOM 25 OP1 A A 421 109.904 34.551 80.631 1.00131.33 O
ATOM 26 OP2 A A 421 111.130 36.785 80.578 1.00143.52 O
ATOM 27 O5' A A 421 112.362 34.630 80.055 1.00118.90 O
TER
ATOM 1 O3' G B 400 117.326 45.644 83.698 1.00139.54 O
ATOM 2 P A B 401 117.672 46.204 82.240 1.00154.70 P
ATOM 3 OP1 A B 401 118.075 47.624 82.391 1.00160.61 O
ATOM 4 OP2 A B 401 116.525 45.883 81.369 1.00162.16 O
ATOM 5 O5' A B 401 118.932 45.328 81.828 1.00144.24 O
ATOM 6 C5' A B 401 120.195 45.531 82.440 1.00145.41 C
ATOM 7 C4' A B 401 121.302 45.449 81.426 1.00150.23 C
ATOM 8 O4' A B 401 121.289 44.133 80.814 1.00148.46 O
ATOM 9 C3' A B 401 121.194 46.418 80.250 1.00151.89 C
ATOM 10 O3' A B 401 121.725 47.704 80.534 1.00155.33 O
ATOM 11 C2' A B 401 121.925 45.683 79.136 1.00149.85 C
ATOM 12 O2' A B 401 123.334 45.807 79.286 1.00139.19 O
ATOM 13 C1' A B 401 121.526 44.235 79.428 1.00153.01 C
ATOM 14 N9 A B 401 120.283 43.847 78.719 1.00157.73 N
ATOM 15 C8 A B 401 119.194 44.636 78.403 1.00155.11 C
ATOM 16 N7 A B 401 118.233 44.007 77.764 1.00147.91 N
ATOM 17 C5 A B 401 118.719 42.712 77.653 1.00152.20 C
ATOM 18 C6 A B 401 118.174 41.553 77.075 1.00154.13 C
ATOM 19 N6 A B 401 116.977 41.517 76.483 1.00150.55 N
ATOM 20 N1 A B 401 118.912 40.421 77.132 1.00155.45 N
ATOM 21 C2 A B 401 120.115 40.460 77.725 1.00155.46 C
ATOM 22 N3 A B 401 120.734 41.487 78.303 1.00153.69 N
ATOM 23 C4 A B 401 119.972 42.595 78.236 1.00153.12 C
ATOM 24 P A B 402 120.933 49.031 80.078 1.00166.28 P
ATOM 25 OP1 A B 402 121.504 50.163 80.846 1.00183.58 O
ATOM 26 OP2 A B 402 119.478 48.745 80.202 1.00168.71 O
ATOM 27 O5' A B 402 121.332 49.168 78.544 1.00138.85 O
TER
Atoms:
OP1: (108.797,41.416,75.448)
OP2: (107.651,40.072,77.305)
C3': (111.556,36.229,77.634)
C1': (112.773,36.280,75.606)
C5': (110.398,38.453,77.192)
O4': (111.860,37.362,75.619)
C8: (114.552,38.100,75.930)
O2': (111.556,34.298,76.172)
C6: (117.614,36.371,76.157)
C5: (116.319,36.919,76.046)
C4: (115.275,36.035,75.865)
P: (108.895,40.489,76.608)
C4': (110.863,37.142,76.645)
C2': (112.373,35.317,76.727)
C2: (116.642,34.291,75.907)
N1: (117.751,35.021,76.082)
N3: (115.371,34.698,75.788)
N6: (118.703,37.127,76.333)
N7: (115.849,38.225,76.086)
N9: (114.139,36.800,75.790)
O5': (109.743,39.211,76.206)
O3': (110.648,35.540,78.480)
OP2: (107.651,40.072,77.305)
C3': (111.556,36.229,77.634)
C1': (112.773,36.280,75.606)
C5': (110.398,38.453,77.192)
O4': (111.860,37.362,75.619)
C8: (114.552,38.100,75.930)
O2': (111.556,34.298,76.172)
C6: (117.614,36.371,76.157)
C5: (116.319,36.919,76.046)
C4: (115.275,36.035,75.865)
P: (108.895,40.489,76.608)
C4': (110.863,37.142,76.645)
C2': (112.373,35.317,76.727)
C2: (116.642,34.291,75.907)
N1: (117.751,35.021,76.082)
N3: (115.371,34.698,75.788)
N6: (118.703,37.127,76.333)
N7: (115.849,38.225,76.086)
N9: (114.139,36.800,75.790)
O5': (109.743,39.211,76.206)
O3': (110.648,35.540,78.480)
OP1: (118.075,47.624,82.391)
OP2: (116.525,45.883,81.369)
C3': (121.194,46.418,80.250)
C1': (121.526,44.235,79.428)
C5': (120.195,45.531,82.440)
O4': (121.289,44.133,80.814)
C8: (119.194,44.636,78.403)
O2': (123.334,45.807,79.286)
C6: (118.174,41.553,77.075)
C5: (118.719,42.712,77.653)
C4: (119.972,42.595,78.236)
P: (117.672,46.204,82.240)
C4': (121.302,45.449,81.426)
C2': (121.925,45.683,79.136)
C2: (120.115,40.460,77.725)
N1: (118.912,40.421,77.132)
N3: (120.734,41.487,78.303)
N6: (116.977,41.517,76.483)
N7: (118.233,44.007,77.764)
N9: (120.283,43.847,78.719)
O5': (118.932,45.328,81.828)
O3': (121.725,47.704,80.534)
OP2: (116.525,45.883,81.369)
C3': (121.194,46.418,80.250)
C1': (121.526,44.235,79.428)
C5': (120.195,45.531,82.440)
O4': (121.289,44.133,80.814)
C8: (119.194,44.636,78.403)
O2': (123.334,45.807,79.286)
C6: (118.174,41.553,77.075)
C5: (118.719,42.712,77.653)
C4: (119.972,42.595,78.236)
P: (117.672,46.204,82.240)
C4': (121.302,45.449,81.426)
C2': (121.925,45.683,79.136)
C2: (120.115,40.460,77.725)
N1: (118.912,40.421,77.132)
N3: (120.734,41.487,78.303)
N6: (116.977,41.517,76.483)
N7: (118.233,44.007,77.764)
N9: (120.283,43.847,78.719)
O5': (118.932,45.328,81.828)
O3': (121.725,47.704,80.534)
Image (generated by PyMOL):