Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0448:0443
Extra
PDB:
ATOM 1 O3' A A 447 45.614 138.961 53.204 1.00 31.26 O
ATOM 2 P A A 448 44.160 138.298 53.041 1.00 32.99 P
ATOM 3 OP1 A A 448 43.450 138.408 54.330 1.00 30.46 O
ATOM 4 OP2 A A 448 44.291 136.969 52.380 1.00 33.59 O
ATOM 5 O5' A A 448 43.421 139.288 52.041 1.00 32.58 O
ATOM 6 C5' A A 448 43.814 139.370 50.663 1.00 31.82 C
ATOM 7 C4' A A 448 42.644 139.807 49.819 1.00 33.73 C
ATOM 8 O4' A A 448 41.657 138.748 49.747 1.00 34.30 O
ATOM 9 C3' A A 448 41.895 141.039 50.308 1.00 33.92 C
ATOM 10 O3' A A 448 41.451 141.739 49.162 1.00 34.99 O
ATOM 11 C2' A A 448 40.726 140.439 51.081 1.00 33.15 C
ATOM 12 O2' A A 448 39.601 141.285 51.140 1.00 33.08 O
ATOM 13 C1' A A 448 40.413 139.214 50.234 1.00 34.23 C
ATOM 14 N9 A A 448 39.782 138.111 50.956 1.00 36.04 N
ATOM 15 C8 A A 448 40.143 137.563 52.159 1.00 36.25 C
ATOM 16 N7 A A 448 39.425 136.526 52.503 1.00 37.91 N
ATOM 17 C5 A A 448 38.519 136.387 51.462 1.00 39.28 C
ATOM 18 C6 A A 448 37.497 135.451 51.208 1.00 38.12 C
ATOM 19 N6 A A 448 37.212 134.428 52.010 1.00 38.41 N
ATOM 20 N1 A A 448 36.777 135.601 50.080 1.00 37.78 N
ATOM 21 C2 A A 448 37.071 136.615 49.263 1.00 38.02 C
ATOM 22 N3 A A 448 38.009 137.550 49.383 1.00 39.08 N
ATOM 23 C4 A A 448 38.710 137.375 50.515 1.00 38.73 C
ATOM 24 P C A 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 25 OP1 C A 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 26 OP2 C A 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 27 O5' C A 449 42.237 144.044 49.680 1.00 31.83 O
TER
ATOM 1 O3' U B 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 2 P A B 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 3 OP1 A B 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 4 OP2 A B 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 5 O5' A B 443 42.466 130.107 60.005 1.00 29.67 O
ATOM 6 C5' A B 443 41.692 128.998 60.479 1.00 28.52 C
ATOM 7 C4' A B 443 40.742 128.543 59.404 1.00 28.55 C
ATOM 8 O4' A B 443 39.797 129.605 59.128 1.00 31.03 O
ATOM 9 C3' A B 443 41.391 128.269 58.063 1.00 29.08 C
ATOM 10 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 11 C2' A B 443 40.233 128.459 57.098 1.00 30.78 C
ATOM 12 O2' A B 443 39.370 127.344 57.094 1.00 34.54 O
ATOM 13 C1' A B 443 39.497 129.630 57.744 1.00 32.10 C
ATOM 14 N9 A B 443 39.846 130.954 57.222 1.00 34.95 N
ATOM 15 C8 A B 443 40.494 131.965 57.889 1.00 36.47 C
ATOM 16 N7 A B 443 40.636 133.059 57.183 1.00 38.22 N
ATOM 17 C5 A B 443 40.052 132.749 55.965 1.00 36.95 C
ATOM 18 C6 A B 443 39.881 133.493 54.789 1.00 36.50 C
ATOM 19 N6 A B 443 40.278 134.757 54.656 1.00 34.65 N
ATOM 20 N1 A B 443 39.273 132.889 53.744 1.00 36.46 N
ATOM 21 C2 A B 443 38.860 131.623 53.890 1.00 36.90 C
ATOM 22 N3 A B 443 38.955 130.822 54.951 1.00 37.26 N
ATOM 23 C4 A B 443 39.570 131.452 55.968 1.00 36.79 C
ATOM 24 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 25 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 26 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 27 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
TER
ATOM 2 P A A 448 44.160 138.298 53.041 1.00 32.99 P
ATOM 3 OP1 A A 448 43.450 138.408 54.330 1.00 30.46 O
ATOM 4 OP2 A A 448 44.291 136.969 52.380 1.00 33.59 O
ATOM 5 O5' A A 448 43.421 139.288 52.041 1.00 32.58 O
ATOM 6 C5' A A 448 43.814 139.370 50.663 1.00 31.82 C
ATOM 7 C4' A A 448 42.644 139.807 49.819 1.00 33.73 C
ATOM 8 O4' A A 448 41.657 138.748 49.747 1.00 34.30 O
ATOM 9 C3' A A 448 41.895 141.039 50.308 1.00 33.92 C
ATOM 10 O3' A A 448 41.451 141.739 49.162 1.00 34.99 O
ATOM 11 C2' A A 448 40.726 140.439 51.081 1.00 33.15 C
ATOM 12 O2' A A 448 39.601 141.285 51.140 1.00 33.08 O
ATOM 13 C1' A A 448 40.413 139.214 50.234 1.00 34.23 C
ATOM 14 N9 A A 448 39.782 138.111 50.956 1.00 36.04 N
ATOM 15 C8 A A 448 40.143 137.563 52.159 1.00 36.25 C
ATOM 16 N7 A A 448 39.425 136.526 52.503 1.00 37.91 N
ATOM 17 C5 A A 448 38.519 136.387 51.462 1.00 39.28 C
ATOM 18 C6 A A 448 37.497 135.451 51.208 1.00 38.12 C
ATOM 19 N6 A A 448 37.212 134.428 52.010 1.00 38.41 N
ATOM 20 N1 A A 448 36.777 135.601 50.080 1.00 37.78 N
ATOM 21 C2 A A 448 37.071 136.615 49.263 1.00 38.02 C
ATOM 22 N3 A A 448 38.009 137.550 49.383 1.00 39.08 N
ATOM 23 C4 A A 448 38.710 137.375 50.515 1.00 38.73 C
ATOM 24 P C A 449 42.358 142.919 48.567 1.00 35.68 P
ATOM 25 OP1 C A 449 41.696 143.425 47.341 1.00 37.49 O
ATOM 26 OP2 C A 449 43.754 142.428 48.495 1.00 31.71 O
ATOM 27 O5' C A 449 42.237 144.044 49.680 1.00 31.83 O
TER
ATOM 1 O3' U B 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 2 P A B 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 3 OP1 A B 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 4 OP2 A B 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 5 O5' A B 443 42.466 130.107 60.005 1.00 29.67 O
ATOM 6 C5' A B 443 41.692 128.998 60.479 1.00 28.52 C
ATOM 7 C4' A B 443 40.742 128.543 59.404 1.00 28.55 C
ATOM 8 O4' A B 443 39.797 129.605 59.128 1.00 31.03 O
ATOM 9 C3' A B 443 41.391 128.269 58.063 1.00 29.08 C
ATOM 10 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 11 C2' A B 443 40.233 128.459 57.098 1.00 30.78 C
ATOM 12 O2' A B 443 39.370 127.344 57.094 1.00 34.54 O
ATOM 13 C1' A B 443 39.497 129.630 57.744 1.00 32.10 C
ATOM 14 N9 A B 443 39.846 130.954 57.222 1.00 34.95 N
ATOM 15 C8 A B 443 40.494 131.965 57.889 1.00 36.47 C
ATOM 16 N7 A B 443 40.636 133.059 57.183 1.00 38.22 N
ATOM 17 C5 A B 443 40.052 132.749 55.965 1.00 36.95 C
ATOM 18 C6 A B 443 39.881 133.493 54.789 1.00 36.50 C
ATOM 19 N6 A B 443 40.278 134.757 54.656 1.00 34.65 N
ATOM 20 N1 A B 443 39.273 132.889 53.744 1.00 36.46 N
ATOM 21 C2 A B 443 38.860 131.623 53.890 1.00 36.90 C
ATOM 22 N3 A B 443 38.955 130.822 54.951 1.00 37.26 N
ATOM 23 C4 A B 443 39.570 131.452 55.968 1.00 36.79 C
ATOM 24 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 25 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 26 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 27 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
TER
Atoms:
OP1: (43.450,138.408,54.330)
OP2: (44.291,136.969,52.380)
C3': (41.895,141.039,50.308)
C1': (40.413,139.214,50.234)
C5': (43.814,139.370,50.663)
O4': (41.657,138.748,49.747)
C8: (40.143,137.563,52.159)
O2': (39.601,141.285,51.140)
C6: (37.497,135.451,51.208)
C5: (38.519,136.387,51.462)
C4: (38.710,137.375,50.515)
P: (44.160,138.298,53.041)
C4': (42.644,139.807,49.819)
C2': (40.726,140.439,51.081)
C2: (37.071,136.615,49.263)
N1: (36.777,135.601,50.080)
N3: (38.009,137.550,49.383)
N6: (37.212,134.428,52.010)
N7: (39.425,136.526,52.503)
N9: (39.782,138.111,50.956)
O5': (43.421,139.288,52.041)
O3': (41.451,141.739,49.162)
OP2: (44.291,136.969,52.380)
C3': (41.895,141.039,50.308)
C1': (40.413,139.214,50.234)
C5': (43.814,139.370,50.663)
O4': (41.657,138.748,49.747)
C8: (40.143,137.563,52.159)
O2': (39.601,141.285,51.140)
C6: (37.497,135.451,51.208)
C5: (38.519,136.387,51.462)
C4: (38.710,137.375,50.515)
P: (44.160,138.298,53.041)
C4': (42.644,139.807,49.819)
C2': (40.726,140.439,51.081)
C2: (37.071,136.615,49.263)
N1: (36.777,135.601,50.080)
N3: (38.009,137.550,49.383)
N6: (37.212,134.428,52.010)
N7: (39.425,136.526,52.503)
N9: (39.782,138.111,50.956)
O5': (43.421,139.288,52.041)
O3': (41.451,141.739,49.162)
OP1: (44.498,129.780,61.437)
OP2: (44.092,131.967,60.153)
C3': (41.391,128.269,58.063)
C1': (39.497,129.630,57.744)
C5': (41.692,128.998,60.479)
O4': (39.797,129.605,59.128)
C8: (40.494,131.965,57.889)
O2': (39.370,127.344,57.094)
C6: (39.881,133.493,54.789)
C5: (40.052,132.749,55.965)
C4: (39.570,131.452,55.968)
P: (43.558,130.812,60.923)
C4': (40.742,128.543,59.404)
C2': (40.233,128.459,57.098)
C2: (38.860,131.623,53.890)
N1: (39.273,132.889,53.744)
N3: (38.955,130.822,54.951)
N6: (40.278,134.757,54.656)
N7: (40.636,133.059,57.183)
N9: (39.846,130.954,57.222)
O5': (42.466,130.107,60.005)
O3': (41.944,126.965,58.012)
OP2: (44.092,131.967,60.153)
C3': (41.391,128.269,58.063)
C1': (39.497,129.630,57.744)
C5': (41.692,128.998,60.479)
O4': (39.797,129.605,59.128)
C8: (40.494,131.965,57.889)
O2': (39.370,127.344,57.094)
C6: (39.881,133.493,54.789)
C5: (40.052,132.749,55.965)
C4: (39.570,131.452,55.968)
P: (43.558,130.812,60.923)
C4': (40.742,128.543,59.404)
C2': (40.233,128.459,57.098)
C2: (38.860,131.623,53.890)
N1: (39.273,132.889,53.744)
N3: (38.955,130.822,54.951)
N6: (40.278,134.757,54.656)
N7: (40.636,133.059,57.183)
N9: (39.846,130.954,57.222)
O5': (42.466,130.107,60.005)
O3': (41.944,126.965,58.012)
Image (generated by PyMOL):