ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 301D:B9:B8

Extra

PDB:
ATOM 1 O3' C A 8 26.395 4.841 16.579 1.00 50.38 O
ATOM 2 P U A 9 26.558 4.756 15.003 1.00 53.92 P
ATOM 3 OP1 U A 9 25.919 5.988 14.467 1.00 56.16 O
ATOM 4 OP2 U A 9 26.054 3.414 14.567 1.00 53.41 O
ATOM 5 O5' U A 9 28.127 4.895 14.834 1.00 45.55 O
ATOM 6 C5' U A 9 28.734 6.089 15.254 1.00 43.14 C
ATOM 7 C4' U A 9 29.814 5.787 16.235 1.00 46.59 C
ATOM 8 O4' U A 9 29.379 4.712 17.095 1.00 43.01 O
ATOM 9 C3' U A 9 31.066 5.178 15.647 1.00 51.48 C
ATOM 10 O3' U A 9 31.879 6.145 15.032 1.00 59.72 O
ATOM 11 C2' U A 9 31.745 4.593 16.867 1.00 44.72 C
ATOM 12 O2' U A 9 32.454 5.576 17.609 1.00 37.04 O
ATOM 13 C1' U A 9 30.528 4.049 17.606 1.00 43.44 C
ATOM 14 N1 U A 9 30.352 2.608 17.431 1.00 39.58 N
ATOM 15 C2 U A 9 31.458 1.817 17.603 1.00 36.26 C
ATOM 16 O2 U A 9 32.563 2.275 17.820 1.00 33.24 O
ATOM 17 N3 U A 9 31.222 0.473 17.517 1.00 40.26 N
ATOM 18 C4 U A 9 30.007 -0.138 17.273 1.00 46.91 C
ATOM 19 O4 U A 9 29.936 -1.364 17.285 1.00 53.41 O
ATOM 20 C5 U A 9 28.912 0.759 17.070 1.00 44.84 C
ATOM 21 C6 U A 9 29.120 2.071 17.147 1.00 43.94 C
ATOM 22 P C A 10 32.379 5.870 13.551 1.00 60.37 P
ATOM 23 OP1 C A 10 32.785 7.221 13.048 1.00 58.34 O
ATOM 24 OP2 C A 10 31.293 5.077 12.877 1.00 52.80 O
ATOM 25 O5' C A 10 33.644 4.927 13.744 1.00 57.34 O
TER

ATOM 1 O3' A B 7 21.736 1.168 17.183 1.00 65.76 O
ATOM 2 P C B 8 22.467 1.222 15.754 1.00 66.93 P
ATOM 3 OP1 C B 8 21.561 2.014 14.894 1.00 68.72 O
ATOM 4 OP2 C B 8 22.848 -0.159 15.336 1.00 68.37 O
ATOM 5 O5' C B 8 23.785 2.068 16.026 1.00 54.03 O
ATOM 6 C5' C B 8 23.673 3.413 16.418 1.00 44.89 C
ATOM 7 C4' C B 8 24.567 3.700 17.582 1.00 41.26 C
ATOM 8 O4' C B 8 24.476 2.664 18.583 1.00 39.26 O
ATOM 9 C3' C B 8 26.045 3.684 17.274 1.00 43.25 C
ATOM 10 O3' C B 8 26.395 4.841 16.579 1.00 50.38 O
ATOM 11 C2' C B 8 26.642 3.647 18.659 1.00 37.60 C
ATOM 12 O2' C B 8 26.536 4.911 19.294 1.00 27.09 O
ATOM 13 C1' C B 8 25.701 2.642 19.312 1.00 40.09 C
ATOM 14 N1 C B 8 26.212 1.267 19.341 1.00 42.37 N
ATOM 15 C2 C B 8 27.520 1.028 19.804 1.00 46.03 C
ATOM 16 O2 C B 8 28.249 1.987 20.076 1.00 48.31 O
ATOM 17 N3 C B 8 27.950 -0.237 19.940 1.00 46.46 N
ATOM 18 C4 C B 8 27.135 -1.244 19.625 1.00 52.29 C
ATOM 19 N4 C B 8 27.570 -2.480 19.827 1.00 57.95 N
ATOM 20 C5 C B 8 25.823 -1.027 19.100 1.00 47.93 C
ATOM 21 C6 C B 8 25.412 0.229 18.972 1.00 42.33 C
ATOM 22 P U B 9 26.558 4.756 15.003 1.00 53.92 P
ATOM 23 OP1 U B 9 25.919 5.988 14.467 1.00 56.16 O
ATOM 24 OP2 U B 9 26.054 3.414 14.567 1.00 53.41 O
ATOM 25 O5' U B 9 28.127 4.895 14.834 1.00 45.55 O
TER

Atoms:
C4: (30.007,-0.138,17.273)
N3: (31.222,0.473,17.517)
OP1: (25.919,5.988,14.467)
OP2: (26.054,3.414,14.567)
C2: (31.458,1.817,17.603)
C1': (30.528,4.049,17.606)
C3': (31.066,5.178,15.647)
O5': (28.127,4.895,14.834)
O4': (29.379,4.712,17.095)
C5': (28.734,6.089,15.254)
P: (26.558,4.756,15.003)
C4': (29.814,5.787,16.235)
C2': (31.745,4.593,16.867)
O2': (32.454,5.576,17.609)
N1: (30.352,2.608,17.431)
O4: (29.936,-1.364,17.285)
O2: (32.563,2.275,17.820)
C6: (29.120,2.071,17.147)
C5: (28.912,0.759,17.070)
O3': (31.879,6.145,15.032)
C2: (27.520,1.028,19.804)
OP1: (21.561,2.014,14.894)
OP2: (22.848,-0.159,15.336)
C4: (27.135,-1.244,19.625)
O5': (23.785,2.068,16.026)
C3': (26.045,3.684,17.274)
C1': (25.701,2.642,19.312)
O4': (24.476,2.664,18.583)
C5': (23.673,3.413,16.418)
P: (22.467,1.222,15.754)
O2: (28.249,1.987,20.076)
C4': (24.567,3.700,17.582)
C2': (26.642,3.647,18.659)
O2': (26.536,4.911,19.294)
N1: (26.212,1.267,19.341)
N3: (27.950,-0.237,19.940)
N4: (27.570,-2.480,19.827)
C6: (25.412,0.229,18.972)
C5: (25.823,-1.027,19.100)
O3': (26.395,4.841,16.579)
Image (generated by PyMOL):
PyMOL image
show in jmol