Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2048:A2561
Extra
PDB:
ATOM 1 O3' G A2047 -84.431 -71.994 -2.540 1.00 51.42 O
ATOM 2 P A A2048 -83.848 -71.460 -1.159 1.00 47.79 P
ATOM 3 OP1 A A2048 -84.960 -70.872 -0.364 1.00 40.67 O
ATOM 4 OP2 A A2048 -82.656 -70.647 -1.473 1.00 50.14 O
ATOM 5 O5' A A2048 -83.370 -72.817 -0.469 1.00 38.22 O
ATOM 6 C5' A A2048 -84.263 -73.895 -0.517 1.00 40.69 C
ATOM 7 C4' A A2048 -83.590 -75.203 -0.152 1.00 37.73 C
ATOM 8 O4' A A2048 -82.588 -75.615 -1.119 1.00 37.50 O
ATOM 9 C3' A A2048 -82.852 -75.184 1.170 1.00 31.67 C
ATOM 10 O3' A A2048 -83.814 -75.139 2.204 1.00 33.58 O
ATOM 11 C2' A A2048 -82.133 -76.520 1.025 1.00 34.32 C
ATOM 12 O2' A A2048 -82.998 -77.638 1.183 1.00 26.08 O
ATOM 13 C1' A A2048 -81.632 -76.404 -0.425 1.00 39.83 C
ATOM 14 N9 A A2048 -80.320 -75.767 -0.633 1.00 48.16 N
ATOM 15 C8 A A2048 -80.103 -74.482 -1.051 1.00 52.74 C
ATOM 16 N7 A A2048 -78.840 -74.146 -1.174 1.00 44.63 N
ATOM 17 C5 A A2048 -78.174 -75.292 -0.819 1.00 46.14 C
ATOM 18 C6 A A2048 -76.802 -75.579 -0.749 1.00 50.25 C
ATOM 19 N6 A A2048 -75.861 -74.682 -1.047 1.00 43.22 N
ATOM 20 N1 A A2048 -76.442 -76.823 -0.360 1.00 54.21 N
ATOM 21 C2 A A2048 -77.411 -77.707 -0.061 1.00 49.33 C
ATOM 22 N3 A A2048 -78.738 -77.546 -0.094 1.00 49.40 N
ATOM 23 C4 A A2048 -79.058 -76.302 -0.484 1.00 47.78 C
ATOM 24 P C A2049 -83.339 -74.836 3.695 1.00 30.80 P
ATOM 25 OP1 C A2049 -81.912 -75.217 3.727 1.00 40.63 O
ATOM 26 OP2 C A2049 -84.298 -75.387 4.686 1.00 47.81 O
ATOM 27 O5' C A2049 -83.470 -73.251 3.811 1.00 46.94 O
TER
ATOM 1 O3' G B2560 -76.454 -62.190 -5.282 1.00 48.65 O
ATOM 2 P A B2561 -76.863 -63.455 -4.375 1.00 60.99 P
ATOM 3 OP1 A B2561 -78.140 -64.120 -4.823 1.00 49.49 O
ATOM 4 OP2 A B2561 -76.770 -62.953 -2.986 1.00 72.31 O
ATOM 5 O5' A B2561 -75.594 -64.409 -4.616 1.00 49.46 O
ATOM 6 C5' A B2561 -74.322 -64.020 -4.105 1.00 58.15 C
ATOM 7 C4' A B2561 -73.437 -65.164 -3.593 1.00 62.01 C
ATOM 8 O4' A B2561 -73.951 -65.834 -2.401 1.00 52.26 O
ATOM 9 C3' A B2561 -73.156 -66.272 -4.591 1.00 56.62 C
ATOM 10 O3' A B2561 -72.071 -65.853 -5.365 1.00 49.81 O
ATOM 11 C2' A B2561 -72.694 -67.381 -3.666 1.00 51.89 C
ATOM 12 O2' A B2561 -71.356 -67.167 -3.280 1.00 56.71 O
ATOM 13 C1' A B2561 -73.610 -67.205 -2.457 1.00 53.59 C
ATOM 14 N9 A B2561 -74.815 -68.016 -2.597 1.00 54.60 N
ATOM 15 C8 A B2561 -75.972 -67.671 -3.236 1.00 63.91 C
ATOM 16 N7 A B2561 -76.892 -68.608 -3.214 1.00 69.06 N
ATOM 17 C5 A B2561 -76.288 -69.644 -2.517 1.00 69.25 C
ATOM 18 C6 A B2561 -76.732 -70.930 -2.149 1.00 71.10 C
ATOM 19 N6 A B2561 -77.942 -71.401 -2.457 1.00 78.85 N
ATOM 20 N1 A B2561 -75.890 -71.715 -1.449 1.00 69.92 N
ATOM 21 C2 A B2561 -74.679 -71.240 -1.148 1.00 66.78 C
ATOM 22 N3 A B2561 -74.154 -70.055 -1.440 1.00 59.47 N
ATOM 23 C4 A B2561 -75.011 -69.295 -2.130 1.00 58.33 C
ATOM 24 P G B2562 -71.995 -66.276 -6.891 1.00 35.68 P
ATOM 25 OP1 G B2562 -71.721 -67.728 -6.960 1.00 52.79 O
ATOM 26 OP2 G B2562 -71.079 -65.333 -7.586 1.00 35.70 O
ATOM 27 O5' G B2562 -73.512 -65.997 -7.333 1.00 48.84 O
TER
ATOM 2 P A A2048 -83.848 -71.460 -1.159 1.00 47.79 P
ATOM 3 OP1 A A2048 -84.960 -70.872 -0.364 1.00 40.67 O
ATOM 4 OP2 A A2048 -82.656 -70.647 -1.473 1.00 50.14 O
ATOM 5 O5' A A2048 -83.370 -72.817 -0.469 1.00 38.22 O
ATOM 6 C5' A A2048 -84.263 -73.895 -0.517 1.00 40.69 C
ATOM 7 C4' A A2048 -83.590 -75.203 -0.152 1.00 37.73 C
ATOM 8 O4' A A2048 -82.588 -75.615 -1.119 1.00 37.50 O
ATOM 9 C3' A A2048 -82.852 -75.184 1.170 1.00 31.67 C
ATOM 10 O3' A A2048 -83.814 -75.139 2.204 1.00 33.58 O
ATOM 11 C2' A A2048 -82.133 -76.520 1.025 1.00 34.32 C
ATOM 12 O2' A A2048 -82.998 -77.638 1.183 1.00 26.08 O
ATOM 13 C1' A A2048 -81.632 -76.404 -0.425 1.00 39.83 C
ATOM 14 N9 A A2048 -80.320 -75.767 -0.633 1.00 48.16 N
ATOM 15 C8 A A2048 -80.103 -74.482 -1.051 1.00 52.74 C
ATOM 16 N7 A A2048 -78.840 -74.146 -1.174 1.00 44.63 N
ATOM 17 C5 A A2048 -78.174 -75.292 -0.819 1.00 46.14 C
ATOM 18 C6 A A2048 -76.802 -75.579 -0.749 1.00 50.25 C
ATOM 19 N6 A A2048 -75.861 -74.682 -1.047 1.00 43.22 N
ATOM 20 N1 A A2048 -76.442 -76.823 -0.360 1.00 54.21 N
ATOM 21 C2 A A2048 -77.411 -77.707 -0.061 1.00 49.33 C
ATOM 22 N3 A A2048 -78.738 -77.546 -0.094 1.00 49.40 N
ATOM 23 C4 A A2048 -79.058 -76.302 -0.484 1.00 47.78 C
ATOM 24 P C A2049 -83.339 -74.836 3.695 1.00 30.80 P
ATOM 25 OP1 C A2049 -81.912 -75.217 3.727 1.00 40.63 O
ATOM 26 OP2 C A2049 -84.298 -75.387 4.686 1.00 47.81 O
ATOM 27 O5' C A2049 -83.470 -73.251 3.811 1.00 46.94 O
TER
ATOM 1 O3' G B2560 -76.454 -62.190 -5.282 1.00 48.65 O
ATOM 2 P A B2561 -76.863 -63.455 -4.375 1.00 60.99 P
ATOM 3 OP1 A B2561 -78.140 -64.120 -4.823 1.00 49.49 O
ATOM 4 OP2 A B2561 -76.770 -62.953 -2.986 1.00 72.31 O
ATOM 5 O5' A B2561 -75.594 -64.409 -4.616 1.00 49.46 O
ATOM 6 C5' A B2561 -74.322 -64.020 -4.105 1.00 58.15 C
ATOM 7 C4' A B2561 -73.437 -65.164 -3.593 1.00 62.01 C
ATOM 8 O4' A B2561 -73.951 -65.834 -2.401 1.00 52.26 O
ATOM 9 C3' A B2561 -73.156 -66.272 -4.591 1.00 56.62 C
ATOM 10 O3' A B2561 -72.071 -65.853 -5.365 1.00 49.81 O
ATOM 11 C2' A B2561 -72.694 -67.381 -3.666 1.00 51.89 C
ATOM 12 O2' A B2561 -71.356 -67.167 -3.280 1.00 56.71 O
ATOM 13 C1' A B2561 -73.610 -67.205 -2.457 1.00 53.59 C
ATOM 14 N9 A B2561 -74.815 -68.016 -2.597 1.00 54.60 N
ATOM 15 C8 A B2561 -75.972 -67.671 -3.236 1.00 63.91 C
ATOM 16 N7 A B2561 -76.892 -68.608 -3.214 1.00 69.06 N
ATOM 17 C5 A B2561 -76.288 -69.644 -2.517 1.00 69.25 C
ATOM 18 C6 A B2561 -76.732 -70.930 -2.149 1.00 71.10 C
ATOM 19 N6 A B2561 -77.942 -71.401 -2.457 1.00 78.85 N
ATOM 20 N1 A B2561 -75.890 -71.715 -1.449 1.00 69.92 N
ATOM 21 C2 A B2561 -74.679 -71.240 -1.148 1.00 66.78 C
ATOM 22 N3 A B2561 -74.154 -70.055 -1.440 1.00 59.47 N
ATOM 23 C4 A B2561 -75.011 -69.295 -2.130 1.00 58.33 C
ATOM 24 P G B2562 -71.995 -66.276 -6.891 1.00 35.68 P
ATOM 25 OP1 G B2562 -71.721 -67.728 -6.960 1.00 52.79 O
ATOM 26 OP2 G B2562 -71.079 -65.333 -7.586 1.00 35.70 O
ATOM 27 O5' G B2562 -73.512 -65.997 -7.333 1.00 48.84 O
TER
Atoms:
OP1: (-84.960,-70.872,-0.364)
OP2: (-82.656,-70.647,-1.473)
C3': (-82.852,-75.184,1.170)
C1': (-81.632,-76.404,-0.425)
C5': (-84.263,-73.895,-0.517)
O4': (-82.588,-75.615,-1.119)
C8: (-80.103,-74.482,-1.051)
O2': (-82.998,-77.638,1.183)
C6: (-76.802,-75.579,-0.749)
C5: (-78.174,-75.292,-0.819)
C4: (-79.058,-76.302,-0.484)
P: (-83.848,-71.460,-1.159)
C4': (-83.590,-75.203,-0.152)
C2': (-82.133,-76.520,1.025)
C2: (-77.411,-77.707,-0.061)
N1: (-76.442,-76.823,-0.360)
N3: (-78.738,-77.546,-0.094)
N6: (-75.861,-74.682,-1.047)
N7: (-78.840,-74.146,-1.174)
N9: (-80.320,-75.767,-0.633)
O5': (-83.370,-72.817,-0.469)
O3': (-83.814,-75.139,2.204)
OP2: (-82.656,-70.647,-1.473)
C3': (-82.852,-75.184,1.170)
C1': (-81.632,-76.404,-0.425)
C5': (-84.263,-73.895,-0.517)
O4': (-82.588,-75.615,-1.119)
C8: (-80.103,-74.482,-1.051)
O2': (-82.998,-77.638,1.183)
C6: (-76.802,-75.579,-0.749)
C5: (-78.174,-75.292,-0.819)
C4: (-79.058,-76.302,-0.484)
P: (-83.848,-71.460,-1.159)
C4': (-83.590,-75.203,-0.152)
C2': (-82.133,-76.520,1.025)
C2: (-77.411,-77.707,-0.061)
N1: (-76.442,-76.823,-0.360)
N3: (-78.738,-77.546,-0.094)
N6: (-75.861,-74.682,-1.047)
N7: (-78.840,-74.146,-1.174)
N9: (-80.320,-75.767,-0.633)
O5': (-83.370,-72.817,-0.469)
O3': (-83.814,-75.139,2.204)
OP1: (-78.140,-64.120,-4.823)
OP2: (-76.770,-62.953,-2.986)
C3': (-73.156,-66.272,-4.591)
C1': (-73.610,-67.205,-2.457)
C5': (-74.322,-64.020,-4.105)
O4': (-73.951,-65.834,-2.401)
C8: (-75.972,-67.671,-3.236)
O2': (-71.356,-67.167,-3.280)
C6: (-76.732,-70.930,-2.149)
C5: (-76.288,-69.644,-2.517)
C4: (-75.011,-69.295,-2.130)
P: (-76.863,-63.455,-4.375)
C4': (-73.437,-65.164,-3.593)
C2': (-72.694,-67.381,-3.666)
C2: (-74.679,-71.240,-1.148)
N1: (-75.890,-71.715,-1.449)
N3: (-74.154,-70.055,-1.440)
N6: (-77.942,-71.401,-2.457)
N7: (-76.892,-68.608,-3.214)
N9: (-74.815,-68.016,-2.597)
O5': (-75.594,-64.409,-4.616)
O3': (-72.071,-65.853,-5.365)
OP2: (-76.770,-62.953,-2.986)
C3': (-73.156,-66.272,-4.591)
C1': (-73.610,-67.205,-2.457)
C5': (-74.322,-64.020,-4.105)
O4': (-73.951,-65.834,-2.401)
C8: (-75.972,-67.671,-3.236)
O2': (-71.356,-67.167,-3.280)
C6: (-76.732,-70.930,-2.149)
C5: (-76.288,-69.644,-2.517)
C4: (-75.011,-69.295,-2.130)
P: (-76.863,-63.455,-4.375)
C4': (-73.437,-65.164,-3.593)
C2': (-72.694,-67.381,-3.666)
C2: (-74.679,-71.240,-1.148)
N1: (-75.890,-71.715,-1.449)
N3: (-74.154,-70.055,-1.440)
N6: (-77.942,-71.401,-2.457)
N7: (-76.892,-68.608,-3.214)
N9: (-74.815,-68.016,-2.597)
O5': (-75.594,-64.409,-4.616)
O3': (-72.071,-65.853,-5.365)
Image (generated by PyMOL):