Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M3:M2
Extra
PDB:
ATOM 1 O3' C A 2 -45.266 27.119-131.057 1.00174.79 O
ATOM 2 P U A 3 -44.452 28.297-130.341 1.00170.89 P
ATOM 3 OP1 U A 3 -45.443 29.356-130.069 1.00170.86 O
ATOM 4 OP2 U A 3 -43.205 28.619-131.088 1.00165.57 O
ATOM 5 O5' U A 3 -44.025 27.608-128.958 1.00175.59 O
ATOM 6 C5' U A 3 -44.988 27.210-127.975 1.00182.51 C
ATOM 7 C4' U A 3 -45.079 25.695-127.802 1.00188.84 C
ATOM 8 O4' U A 3 -44.812 25.023-129.059 1.00187.18 O
ATOM 9 C3' U A 3 -44.088 25.017-126.849 1.00191.87 C
ATOM 10 O3' U A 3 -44.448 25.121-125.501 1.00197.80 O
ATOM 11 C2' U A 3 -44.146 23.578-127.327 1.00195.08 C
ATOM 12 O2' U A 3 -45.377 22.908-127.106 1.00201.00 O
ATOM 13 C1' U A 3 -43.972 23.907-128.803 1.00189.86 C
ATOM 14 N1 U A 3 -42.529 24.177-129.215 1.00185.37 N
ATOM 15 C2 U A 3 -41.518 23.305-128.809 1.00187.36 C
ATOM 16 O2 U A 3 -41.690 22.313-128.116 1.00191.59 O
ATOM 17 N3 U A 3 -40.256 23.640-129.249 1.00183.65 N
ATOM 18 C4 U A 3 -39.901 24.720-130.031 1.00177.61 C
ATOM 19 O4 U A 3 -38.726 24.865-130.329 1.00175.61 O
ATOM 20 C5 U A 3 -40.991 25.576-130.421 1.00176.01 C
ATOM 21 C6 U A 3 -42.227 25.277-130.006 1.00179.60 C
ATOM 22 P C A 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 23 OP1 C A 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 24 OP2 C A 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 25 O5' C A 4 -43.520 25.653-123.203 1.00204.68 O
TER
ATOM 1 O3' U B 1 -42.515 28.126-137.097 1.00166.33 O
ATOM 2 P C B 2 -42.608 28.702-135.588 1.00165.11 P
ATOM 3 OP1 C B 2 -42.826 30.167-135.608 1.00162.98 O
ATOM 4 OP2 C B 2 -41.518 28.185-134.736 1.00164.63 O
ATOM 5 O5' C B 2 -43.985 27.989-135.205 1.00168.92 O
ATOM 6 C5' C B 2 -44.597 28.168-133.945 1.00170.34 C
ATOM 7 C4' C B 2 -45.191 26.857-133.468 1.00173.73 C
ATOM 8 O4' C B 2 -44.811 25.762-134.336 1.00174.63 O
ATOM 9 C3' C B 2 -44.679 26.394-132.121 1.00174.82 C
ATOM 10 O3' C B 2 -45.266 27.119-131.057 1.00174.79 O
ATOM 11 C2' C B 2 -45.064 24.920-132.187 1.00179.74 C
ATOM 12 O2' C B 2 -46.453 24.656-132.165 1.00184.49 O
ATOM 13 C1' C B 2 -44.488 24.617-133.563 1.00178.22 C
ATOM 14 N1 C B 2 -42.984 24.371-133.545 1.00176.31 N
ATOM 15 C2 C B 2 -42.435 23.263-132.855 1.00178.96 C
ATOM 16 O2 C B 2 -43.172 22.477-132.260 1.00183.33 O
ATOM 17 N3 C B 2 -41.091 23.065-132.851 1.00177.14 N
ATOM 18 C4 C B 2 -40.291 23.921-133.498 1.00173.02 C
ATOM 19 N4 C B 2 -38.969 23.698-133.472 1.00171.66 N
ATOM 20 C5 C B 2 -40.816 25.049-134.206 1.00170.61 C
ATOM 21 C6 C B 2 -42.144 25.230-134.200 1.00172.03 C
ATOM 22 P U B 3 -44.452 28.297-130.341 1.00170.89 P
ATOM 23 OP1 U B 3 -45.443 29.356-130.069 1.00170.86 O
ATOM 24 OP2 U B 3 -43.205 28.619-131.088 1.00165.57 O
ATOM 25 O5' U B 3 -44.025 27.608-128.958 1.00175.59 O
TER
ATOM 2 P U A 3 -44.452 28.297-130.341 1.00170.89 P
ATOM 3 OP1 U A 3 -45.443 29.356-130.069 1.00170.86 O
ATOM 4 OP2 U A 3 -43.205 28.619-131.088 1.00165.57 O
ATOM 5 O5' U A 3 -44.025 27.608-128.958 1.00175.59 O
ATOM 6 C5' U A 3 -44.988 27.210-127.975 1.00182.51 C
ATOM 7 C4' U A 3 -45.079 25.695-127.802 1.00188.84 C
ATOM 8 O4' U A 3 -44.812 25.023-129.059 1.00187.18 O
ATOM 9 C3' U A 3 -44.088 25.017-126.849 1.00191.87 C
ATOM 10 O3' U A 3 -44.448 25.121-125.501 1.00197.80 O
ATOM 11 C2' U A 3 -44.146 23.578-127.327 1.00195.08 C
ATOM 12 O2' U A 3 -45.377 22.908-127.106 1.00201.00 O
ATOM 13 C1' U A 3 -43.972 23.907-128.803 1.00189.86 C
ATOM 14 N1 U A 3 -42.529 24.177-129.215 1.00185.37 N
ATOM 15 C2 U A 3 -41.518 23.305-128.809 1.00187.36 C
ATOM 16 O2 U A 3 -41.690 22.313-128.116 1.00191.59 O
ATOM 17 N3 U A 3 -40.256 23.640-129.249 1.00183.65 N
ATOM 18 C4 U A 3 -39.901 24.720-130.031 1.00177.61 C
ATOM 19 O4 U A 3 -38.726 24.865-130.329 1.00175.61 O
ATOM 20 C5 U A 3 -40.991 25.576-130.421 1.00176.01 C
ATOM 21 C6 U A 3 -42.227 25.277-130.006 1.00179.60 C
ATOM 22 P C A 4 -43.714 26.270-124.676 1.00197.35 P
ATOM 23 OP1 C A 4 -44.655 27.410-124.611 1.00196.18 O
ATOM 24 OP2 C A 4 -42.387 26.497-125.294 1.00193.12 O
ATOM 25 O5' C A 4 -43.520 25.653-123.203 1.00204.68 O
TER
ATOM 1 O3' U B 1 -42.515 28.126-137.097 1.00166.33 O
ATOM 2 P C B 2 -42.608 28.702-135.588 1.00165.11 P
ATOM 3 OP1 C B 2 -42.826 30.167-135.608 1.00162.98 O
ATOM 4 OP2 C B 2 -41.518 28.185-134.736 1.00164.63 O
ATOM 5 O5' C B 2 -43.985 27.989-135.205 1.00168.92 O
ATOM 6 C5' C B 2 -44.597 28.168-133.945 1.00170.34 C
ATOM 7 C4' C B 2 -45.191 26.857-133.468 1.00173.73 C
ATOM 8 O4' C B 2 -44.811 25.762-134.336 1.00174.63 O
ATOM 9 C3' C B 2 -44.679 26.394-132.121 1.00174.82 C
ATOM 10 O3' C B 2 -45.266 27.119-131.057 1.00174.79 O
ATOM 11 C2' C B 2 -45.064 24.920-132.187 1.00179.74 C
ATOM 12 O2' C B 2 -46.453 24.656-132.165 1.00184.49 O
ATOM 13 C1' C B 2 -44.488 24.617-133.563 1.00178.22 C
ATOM 14 N1 C B 2 -42.984 24.371-133.545 1.00176.31 N
ATOM 15 C2 C B 2 -42.435 23.263-132.855 1.00178.96 C
ATOM 16 O2 C B 2 -43.172 22.477-132.260 1.00183.33 O
ATOM 17 N3 C B 2 -41.091 23.065-132.851 1.00177.14 N
ATOM 18 C4 C B 2 -40.291 23.921-133.498 1.00173.02 C
ATOM 19 N4 C B 2 -38.969 23.698-133.472 1.00171.66 N
ATOM 20 C5 C B 2 -40.816 25.049-134.206 1.00170.61 C
ATOM 21 C6 C B 2 -42.144 25.230-134.200 1.00172.03 C
ATOM 22 P U B 3 -44.452 28.297-130.341 1.00170.89 P
ATOM 23 OP1 U B 3 -45.443 29.356-130.069 1.00170.86 O
ATOM 24 OP2 U B 3 -43.205 28.619-131.088 1.00165.57 O
ATOM 25 O5' U B 3 -44.025 27.608-128.958 1.00175.59 O
TER
Atoms:
C4: (-39.901,24.720,-130.031)
N3: (-40.256,23.640,-129.249)
OP1: (-45.443,29.356,-130.069)
OP2: (-43.205,28.619,-131.088)
C2: (-41.518,23.305,-128.809)
C1': (-43.972,23.907,-128.803)
C3': (-44.088,25.017,-126.849)
O5': (-44.025,27.608,-128.958)
O4': (-44.812,25.023,-129.059)
C5': (-44.988,27.210,-127.975)
P: (-44.452,28.297,-130.341)
C4': (-45.079,25.695,-127.802)
C2': (-44.146,23.578,-127.327)
O2': (-45.377,22.908,-127.106)
N1: (-42.529,24.177,-129.215)
O4: (-38.726,24.865,-130.329)
O2: (-41.690,22.313,-128.116)
C6: (-42.227,25.277,-130.006)
C5: (-40.991,25.576,-130.421)
O3': (-44.448,25.121,-125.501)
N3: (-40.256,23.640,-129.249)
OP1: (-45.443,29.356,-130.069)
OP2: (-43.205,28.619,-131.088)
C2: (-41.518,23.305,-128.809)
C1': (-43.972,23.907,-128.803)
C3': (-44.088,25.017,-126.849)
O5': (-44.025,27.608,-128.958)
O4': (-44.812,25.023,-129.059)
C5': (-44.988,27.210,-127.975)
P: (-44.452,28.297,-130.341)
C4': (-45.079,25.695,-127.802)
C2': (-44.146,23.578,-127.327)
O2': (-45.377,22.908,-127.106)
N1: (-42.529,24.177,-129.215)
O4: (-38.726,24.865,-130.329)
O2: (-41.690,22.313,-128.116)
C6: (-42.227,25.277,-130.006)
C5: (-40.991,25.576,-130.421)
O3': (-44.448,25.121,-125.501)
C2: (-42.435,23.263,-132.855)
OP1: (-42.826,30.167,-135.608)
OP2: (-41.518,28.185,-134.736)
C4: (-40.291,23.921,-133.498)
O5': (-43.985,27.989,-135.205)
C3': (-44.679,26.394,-132.121)
C1': (-44.488,24.617,-133.563)
O4': (-44.811,25.762,-134.336)
C5': (-44.597,28.168,-133.945)
P: (-42.608,28.702,-135.588)
O2: (-43.172,22.477,-132.260)
C4': (-45.191,26.857,-133.468)
C2': (-45.064,24.920,-132.187)
O2': (-46.453,24.656,-132.165)
N1: (-42.984,24.371,-133.545)
N3: (-41.091,23.065,-132.851)
N4: (-38.969,23.698,-133.472)
C6: (-42.144,25.230,-134.200)
C5: (-40.816,25.049,-134.206)
O3': (-45.266,27.119,-131.057)
OP1: (-42.826,30.167,-135.608)
OP2: (-41.518,28.185,-134.736)
C4: (-40.291,23.921,-133.498)
O5': (-43.985,27.989,-135.205)
C3': (-44.679,26.394,-132.121)
C1': (-44.488,24.617,-133.563)
O4': (-44.811,25.762,-134.336)
C5': (-44.597,28.168,-133.945)
P: (-42.608,28.702,-135.588)
O2: (-43.172,22.477,-132.260)
C4': (-45.191,26.857,-133.468)
C2': (-45.064,24.920,-132.187)
O2': (-46.453,24.656,-132.165)
N1: (-42.984,24.371,-133.545)
N3: (-41.091,23.065,-132.851)
N4: (-38.969,23.698,-133.472)
C6: (-42.144,25.230,-134.200)
C5: (-40.816,25.049,-134.206)
O3': (-45.266,27.119,-131.057)
Image (generated by PyMOL):