Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1827:A1834
Extra
PDB:
ATOM 1 O3' G A1826 -60.056 108.466 115.502 1.00 39.68 O
ATOM 2 P U A1827 -59.490 106.966 115.586 1.00 31.82 P
ATOM 3 OP1 U A1827 -60.657 106.048 115.629 1.00 56.56 O
ATOM 4 OP2 U A1827 -58.479 106.927 116.675 1.00 56.67 O
ATOM 5 O5' U A1827 -58.730 106.769 114.199 1.00 46.97 O
ATOM 6 C5' U A1827 -59.385 107.090 112.960 1.00 46.97 C
ATOM 7 C4' U A1827 -58.402 107.085 111.816 1.00 46.97 C
ATOM 8 O4' U A1827 -57.395 108.102 112.008 1.00 46.97 O
ATOM 9 C3' U A1827 -57.611 105.807 111.617 1.00 46.97 C
ATOM 10 O3' U A1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 11 C2' U A1827 -56.383 106.274 110.846 1.00 46.97 C
ATOM 12 O2' U A1827 -56.597 106.331 109.447 1.00 46.97 O
ATOM 13 C1' U A1827 -56.189 107.689 111.389 1.00 46.97 C
ATOM 14 N1 U A1827 -55.081 107.811 112.347 1.00 48.38 N
ATOM 15 C2 U A1827 -53.817 108.062 111.834 1.00 48.45 C
ATOM 16 O2 U A1827 -53.589 108.178 110.635 1.00 48.46 O
ATOM 17 N3 U A1827 -52.827 108.168 112.773 1.00 48.52 N
ATOM 18 C4 U A1827 -52.966 108.046 114.135 1.00 48.46 C
ATOM 19 O4 U A1827 -51.971 108.125 114.845 1.00 48.38 O
ATOM 20 C5 U A1827 -54.296 107.789 114.585 1.00 48.46 C
ATOM 21 C6 U A1827 -55.283 107.682 113.700 1.00 48.41 C
ATOM 22 P A A1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 23 OP1 A A1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 24 OP2 A A1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 25 O5' A A1828 -57.548 102.675 110.030 1.00 21.83 O
TER
ATOM 1 O3' U B1833 -48.140 104.420 118.939 1.00 22.15 O
ATOM 2 P A B1834 -48.623 105.935 118.675 1.00 44.32 P
ATOM 3 OP1 A B1834 -47.644 106.807 119.376 1.00 25.74 O
ATOM 4 OP2 A B1834 -50.089 106.061 118.983 1.00 25.74 O
ATOM 5 O5' A B1834 -48.429 106.125 117.104 1.00 21.38 O
ATOM 6 C5' A B1834 -47.181 105.795 116.461 1.00 21.38 C
ATOM 7 C4' A B1834 -47.333 105.849 114.953 1.00 21.38 C
ATOM 8 O4' A B1834 -48.326 104.874 114.541 1.00 21.38 O
ATOM 9 C3' A B1834 -47.762 107.184 114.353 1.00 21.38 C
ATOM 10 O3' A B1834 -47.051 107.427 113.155 1.00 21.38 O
ATOM 11 C2' A B1834 -49.243 106.993 114.039 1.00 21.38 C
ATOM 12 O2' A B1834 -49.644 107.679 112.872 1.00 21.38 O
ATOM 13 C1' A B1834 -49.341 105.497 113.777 1.00 21.38 C
ATOM 14 N9 A B1834 -50.637 104.969 114.213 1.00 26.97 N
ATOM 15 C8 A B1834 -51.051 104.694 115.496 1.00 26.97 C
ATOM 16 N7 A B1834 -52.280 104.253 115.573 1.00 26.97 N
ATOM 17 C5 A B1834 -52.704 104.227 114.257 1.00 26.97 C
ATOM 18 C6 A B1834 -53.918 103.853 113.674 1.00 26.97 C
ATOM 19 N6 A B1834 -54.968 103.419 114.377 1.00 26.97 N
ATOM 20 N1 A B1834 -54.023 103.939 112.330 1.00 26.97 N
ATOM 21 C2 A B1834 -52.966 104.383 111.633 1.00 26.97 C
ATOM 22 N3 A B1834 -51.767 104.768 112.072 1.00 26.97 N
ATOM 23 C4 A B1834 -51.702 104.662 113.408 1.00 26.97 C
ATOM 24 P A B1835 -46.195 108.773 113.010 1.00 54.08 P
ATOM 25 OP1 A B1835 -44.914 108.578 113.736 1.00 47.01 O
ATOM 26 OP2 A B1835 -47.083 109.913 113.376 1.00 47.01 O
ATOM 27 O5' A B1835 -45.891 108.844 111.450 1.00 17.24 O
TER
ATOM 2 P U A1827 -59.490 106.966 115.586 1.00 31.82 P
ATOM 3 OP1 U A1827 -60.657 106.048 115.629 1.00 56.56 O
ATOM 4 OP2 U A1827 -58.479 106.927 116.675 1.00 56.67 O
ATOM 5 O5' U A1827 -58.730 106.769 114.199 1.00 46.97 O
ATOM 6 C5' U A1827 -59.385 107.090 112.960 1.00 46.97 C
ATOM 7 C4' U A1827 -58.402 107.085 111.816 1.00 46.97 C
ATOM 8 O4' U A1827 -57.395 108.102 112.008 1.00 46.97 O
ATOM 9 C3' U A1827 -57.611 105.807 111.617 1.00 46.97 C
ATOM 10 O3' U A1827 -58.366 104.895 110.848 1.00 46.97 O
ATOM 11 C2' U A1827 -56.383 106.274 110.846 1.00 46.97 C
ATOM 12 O2' U A1827 -56.597 106.331 109.447 1.00 46.97 O
ATOM 13 C1' U A1827 -56.189 107.689 111.389 1.00 46.97 C
ATOM 14 N1 U A1827 -55.081 107.811 112.347 1.00 48.38 N
ATOM 15 C2 U A1827 -53.817 108.062 111.834 1.00 48.45 C
ATOM 16 O2 U A1827 -53.589 108.178 110.635 1.00 48.46 O
ATOM 17 N3 U A1827 -52.827 108.168 112.773 1.00 48.52 N
ATOM 18 C4 U A1827 -52.966 108.046 114.135 1.00 48.46 C
ATOM 19 O4 U A1827 -51.971 108.125 114.845 1.00 48.38 O
ATOM 20 C5 U A1827 -54.296 107.789 114.585 1.00 48.46 C
ATOM 21 C6 U A1827 -55.283 107.682 113.700 1.00 48.41 C
ATOM 22 P A A1828 -58.352 103.343 111.223 1.00 61.00 P
ATOM 23 OP1 A A1828 -59.759 102.885 111.145 1.00 28.67 O
ATOM 24 OP2 A A1828 -57.576 103.140 112.465 1.00 28.95 O
ATOM 25 O5' A A1828 -57.548 102.675 110.030 1.00 21.83 O
TER
ATOM 1 O3' U B1833 -48.140 104.420 118.939 1.00 22.15 O
ATOM 2 P A B1834 -48.623 105.935 118.675 1.00 44.32 P
ATOM 3 OP1 A B1834 -47.644 106.807 119.376 1.00 25.74 O
ATOM 4 OP2 A B1834 -50.089 106.061 118.983 1.00 25.74 O
ATOM 5 O5' A B1834 -48.429 106.125 117.104 1.00 21.38 O
ATOM 6 C5' A B1834 -47.181 105.795 116.461 1.00 21.38 C
ATOM 7 C4' A B1834 -47.333 105.849 114.953 1.00 21.38 C
ATOM 8 O4' A B1834 -48.326 104.874 114.541 1.00 21.38 O
ATOM 9 C3' A B1834 -47.762 107.184 114.353 1.00 21.38 C
ATOM 10 O3' A B1834 -47.051 107.427 113.155 1.00 21.38 O
ATOM 11 C2' A B1834 -49.243 106.993 114.039 1.00 21.38 C
ATOM 12 O2' A B1834 -49.644 107.679 112.872 1.00 21.38 O
ATOM 13 C1' A B1834 -49.341 105.497 113.777 1.00 21.38 C
ATOM 14 N9 A B1834 -50.637 104.969 114.213 1.00 26.97 N
ATOM 15 C8 A B1834 -51.051 104.694 115.496 1.00 26.97 C
ATOM 16 N7 A B1834 -52.280 104.253 115.573 1.00 26.97 N
ATOM 17 C5 A B1834 -52.704 104.227 114.257 1.00 26.97 C
ATOM 18 C6 A B1834 -53.918 103.853 113.674 1.00 26.97 C
ATOM 19 N6 A B1834 -54.968 103.419 114.377 1.00 26.97 N
ATOM 20 N1 A B1834 -54.023 103.939 112.330 1.00 26.97 N
ATOM 21 C2 A B1834 -52.966 104.383 111.633 1.00 26.97 C
ATOM 22 N3 A B1834 -51.767 104.768 112.072 1.00 26.97 N
ATOM 23 C4 A B1834 -51.702 104.662 113.408 1.00 26.97 C
ATOM 24 P A B1835 -46.195 108.773 113.010 1.00 54.08 P
ATOM 25 OP1 A B1835 -44.914 108.578 113.736 1.00 47.01 O
ATOM 26 OP2 A B1835 -47.083 109.913 113.376 1.00 47.01 O
ATOM 27 O5' A B1835 -45.891 108.844 111.450 1.00 17.24 O
TER
Atoms:
C4: (-52.966,108.046,114.135)
N3: (-52.827,108.168,112.773)
OP1: (-60.657,106.048,115.629)
OP2: (-58.479,106.927,116.675)
C2: (-53.817,108.062,111.834)
C1': (-56.189,107.689,111.389)
C3': (-57.611,105.807,111.617)
O5': (-58.730,106.769,114.199)
O4': (-57.395,108.102,112.008)
C5': (-59.385,107.090,112.960)
P: (-59.490,106.966,115.586)
C4': (-58.402,107.085,111.816)
C2': (-56.383,106.274,110.846)
O2': (-56.597,106.331,109.447)
N1: (-55.081,107.811,112.347)
O4: (-51.971,108.125,114.845)
O2: (-53.589,108.178,110.635)
C6: (-55.283,107.682,113.700)
C5: (-54.296,107.789,114.585)
O3': (-58.366,104.895,110.848)
N3: (-52.827,108.168,112.773)
OP1: (-60.657,106.048,115.629)
OP2: (-58.479,106.927,116.675)
C2: (-53.817,108.062,111.834)
C1': (-56.189,107.689,111.389)
C3': (-57.611,105.807,111.617)
O5': (-58.730,106.769,114.199)
O4': (-57.395,108.102,112.008)
C5': (-59.385,107.090,112.960)
P: (-59.490,106.966,115.586)
C4': (-58.402,107.085,111.816)
C2': (-56.383,106.274,110.846)
O2': (-56.597,106.331,109.447)
N1: (-55.081,107.811,112.347)
O4: (-51.971,108.125,114.845)
O2: (-53.589,108.178,110.635)
C6: (-55.283,107.682,113.700)
C5: (-54.296,107.789,114.585)
O3': (-58.366,104.895,110.848)
OP1: (-47.644,106.807,119.376)
OP2: (-50.089,106.061,118.983)
C3': (-47.762,107.184,114.353)
C1': (-49.341,105.497,113.777)
C5': (-47.181,105.795,116.461)
O4': (-48.326,104.874,114.541)
C8: (-51.051,104.694,115.496)
O2': (-49.644,107.679,112.872)
C6: (-53.918,103.853,113.674)
C5: (-52.704,104.227,114.257)
C4: (-51.702,104.662,113.408)
P: (-48.623,105.935,118.675)
C4': (-47.333,105.849,114.953)
C2': (-49.243,106.993,114.039)
C2: (-52.966,104.383,111.633)
N1: (-54.023,103.939,112.330)
N3: (-51.767,104.768,112.072)
N6: (-54.968,103.419,114.377)
N7: (-52.280,104.253,115.573)
N9: (-50.637,104.969,114.213)
O5': (-48.429,106.125,117.104)
O3': (-47.051,107.427,113.155)
OP2: (-50.089,106.061,118.983)
C3': (-47.762,107.184,114.353)
C1': (-49.341,105.497,113.777)
C5': (-47.181,105.795,116.461)
O4': (-48.326,104.874,114.541)
C8: (-51.051,104.694,115.496)
O2': (-49.644,107.679,112.872)
C6: (-53.918,103.853,113.674)
C5: (-52.704,104.227,114.257)
C4: (-51.702,104.662,113.408)
P: (-48.623,105.935,118.675)
C4': (-47.333,105.849,114.953)
C2': (-49.243,106.993,114.039)
C2: (-52.966,104.383,111.633)
N1: (-54.023,103.939,112.330)
N3: (-51.767,104.768,112.072)
N6: (-54.968,103.419,114.377)
N7: (-52.280,104.253,115.573)
N9: (-50.637,104.969,114.213)
O5': (-48.429,106.125,117.104)
O3': (-47.051,107.427,113.155)
Image (generated by PyMOL):