Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1250:A1582
Extra
PDB:
ATOM 1 O3' U A1249 31.575 -43.654 -0.679 1.00 38.87 O
ATOM 2 P A A1250 32.770 -44.522 -0.086 1.00 36.66 P
ATOM 3 OP1 A A1250 33.162 -43.896 1.203 1.00 60.32 O
ATOM 4 OP2 A A1250 33.770 -44.619 -1.172 1.00 45.28 O
ATOM 5 O5' A A1250 32.141 -45.946 0.195 1.00 31.50 O
ATOM 6 C5' A A1250 31.184 -46.497 -0.675 1.00 34.50 C
ATOM 7 C4' A A1250 31.243 -47.988 -0.688 1.00 27.36 C
ATOM 8 O4' A A1250 30.035 -48.516 -0.063 1.00 37.76 O
ATOM 9 C3' A A1250 31.253 -48.572 -2.079 1.00 33.72 C
ATOM 10 O3' A A1250 31.750 -49.899 -2.007 1.00 42.25 O
ATOM 11 C2' A A1250 29.776 -48.626 -2.372 1.00 35.04 C
ATOM 12 O2' A A1250 29.422 -49.418 -3.478 1.00 37.57 O
ATOM 13 C1' A A1250 29.285 -49.205 -1.051 1.00 40.28 C
ATOM 14 N9 A A1250 27.845 -49.026 -0.807 1.00 34.76 N
ATOM 15 C8 A A1250 26.974 -50.008 -0.427 1.00 33.31 C
ATOM 16 N7 A A1250 25.740 -49.621 -0.313 1.00 36.57 N
ATOM 17 C5 A A1250 25.803 -48.293 -0.671 1.00 37.87 C
ATOM 18 C6 A A1250 24.804 -47.318 -0.753 1.00 43.05 C
ATOM 19 N6 A A1250 23.522 -47.576 -0.466 1.00 42.43 N
ATOM 20 N1 A A1250 25.183 -46.073 -1.132 1.00 40.08 N
ATOM 21 C2 A A1250 26.477 -45.855 -1.394 1.00 36.92 C
ATOM 22 N3 A A1250 27.504 -46.694 -1.339 1.00 34.69 N
ATOM 23 C4 A A1250 27.088 -47.910 -0.977 1.00 33.91 C
ATOM 24 P A A1251 33.297 -50.219 -2.311 1.00 40.34 P
ATOM 25 OP1 A A1251 34.046 -49.972 -1.048 1.00 31.28 O
ATOM 26 OP2 A A1251 33.679 -49.470 -3.543 1.00 25.64 O
ATOM 27 O5' A A1251 33.237 -51.757 -2.626 1.00 28.01 O
TER
ATOM 1 O3' C B1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 2 P A B1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 3 OP1 A B1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 4 OP2 A B1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 5 O5' A B1582 16.620 -53.139 4.068 1.00 44.05 O
ATOM 6 C5' A B1582 15.383 -52.889 3.425 1.00 40.99 C
ATOM 7 C4' A B1582 15.567 -52.135 2.146 1.00 29.33 C
ATOM 8 O4' A B1582 16.439 -51.006 2.368 1.00 47.24 O
ATOM 9 C3' A B1582 16.253 -52.883 1.038 1.00 36.02 C
ATOM 10 O3' A B1582 15.415 -53.793 0.388 1.00 35.44 O
ATOM 11 C2' A B1582 16.748 -51.766 0.147 1.00 40.13 C
ATOM 12 O2' A B1582 15.681 -51.218 -0.594 1.00 48.61 O
ATOM 13 C1' A B1582 17.181 -50.743 1.189 1.00 48.14 C
ATOM 14 N9 A B1582 18.620 -50.856 1.499 1.00 46.85 N
ATOM 15 C8 A B1582 19.179 -51.435 2.603 1.00 47.01 C
ATOM 16 N7 A B1582 20.498 -51.402 2.604 1.00 51.87 N
ATOM 17 C5 A B1582 20.842 -50.755 1.429 1.00 46.45 C
ATOM 18 C6 A B1582 22.086 -50.412 0.866 1.00 47.28 C
ATOM 19 N6 A B1582 23.270 -50.688 1.431 1.00 49.92 N
ATOM 20 N1 A B1582 22.075 -49.785 -0.322 1.00 37.77 N
ATOM 21 C2 A B1582 20.894 -49.541 -0.867 1.00 41.97 C
ATOM 22 N3 A B1582 19.666 -49.804 -0.430 1.00 45.37 N
ATOM 23 C4 A B1582 19.694 -50.423 0.743 1.00 43.29 C
ATOM 24 P G B1583 15.738 -55.359 0.474 1.00 45.76 P
ATOM 25 OP1 G B1583 14.625 -56.074 -0.206 1.00 54.43 O
ATOM 26 OP2 G B1583 16.027 -55.667 1.899 1.00 43.14 O
ATOM 27 O5' G B1583 17.059 -55.484 -0.389 1.00 42.05 O
TER
ATOM 2 P A A1250 32.770 -44.522 -0.086 1.00 36.66 P
ATOM 3 OP1 A A1250 33.162 -43.896 1.203 1.00 60.32 O
ATOM 4 OP2 A A1250 33.770 -44.619 -1.172 1.00 45.28 O
ATOM 5 O5' A A1250 32.141 -45.946 0.195 1.00 31.50 O
ATOM 6 C5' A A1250 31.184 -46.497 -0.675 1.00 34.50 C
ATOM 7 C4' A A1250 31.243 -47.988 -0.688 1.00 27.36 C
ATOM 8 O4' A A1250 30.035 -48.516 -0.063 1.00 37.76 O
ATOM 9 C3' A A1250 31.253 -48.572 -2.079 1.00 33.72 C
ATOM 10 O3' A A1250 31.750 -49.899 -2.007 1.00 42.25 O
ATOM 11 C2' A A1250 29.776 -48.626 -2.372 1.00 35.04 C
ATOM 12 O2' A A1250 29.422 -49.418 -3.478 1.00 37.57 O
ATOM 13 C1' A A1250 29.285 -49.205 -1.051 1.00 40.28 C
ATOM 14 N9 A A1250 27.845 -49.026 -0.807 1.00 34.76 N
ATOM 15 C8 A A1250 26.974 -50.008 -0.427 1.00 33.31 C
ATOM 16 N7 A A1250 25.740 -49.621 -0.313 1.00 36.57 N
ATOM 17 C5 A A1250 25.803 -48.293 -0.671 1.00 37.87 C
ATOM 18 C6 A A1250 24.804 -47.318 -0.753 1.00 43.05 C
ATOM 19 N6 A A1250 23.522 -47.576 -0.466 1.00 42.43 N
ATOM 20 N1 A A1250 25.183 -46.073 -1.132 1.00 40.08 N
ATOM 21 C2 A A1250 26.477 -45.855 -1.394 1.00 36.92 C
ATOM 22 N3 A A1250 27.504 -46.694 -1.339 1.00 34.69 N
ATOM 23 C4 A A1250 27.088 -47.910 -0.977 1.00 33.91 C
ATOM 24 P A A1251 33.297 -50.219 -2.311 1.00 40.34 P
ATOM 25 OP1 A A1251 34.046 -49.972 -1.048 1.00 31.28 O
ATOM 26 OP2 A A1251 33.679 -49.470 -3.543 1.00 25.64 O
ATOM 27 O5' A A1251 33.237 -51.757 -2.626 1.00 28.01 O
TER
ATOM 1 O3' C B1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 2 P A B1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 3 OP1 A B1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 4 OP2 A B1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 5 O5' A B1582 16.620 -53.139 4.068 1.00 44.05 O
ATOM 6 C5' A B1582 15.383 -52.889 3.425 1.00 40.99 C
ATOM 7 C4' A B1582 15.567 -52.135 2.146 1.00 29.33 C
ATOM 8 O4' A B1582 16.439 -51.006 2.368 1.00 47.24 O
ATOM 9 C3' A B1582 16.253 -52.883 1.038 1.00 36.02 C
ATOM 10 O3' A B1582 15.415 -53.793 0.388 1.00 35.44 O
ATOM 11 C2' A B1582 16.748 -51.766 0.147 1.00 40.13 C
ATOM 12 O2' A B1582 15.681 -51.218 -0.594 1.00 48.61 O
ATOM 13 C1' A B1582 17.181 -50.743 1.189 1.00 48.14 C
ATOM 14 N9 A B1582 18.620 -50.856 1.499 1.00 46.85 N
ATOM 15 C8 A B1582 19.179 -51.435 2.603 1.00 47.01 C
ATOM 16 N7 A B1582 20.498 -51.402 2.604 1.00 51.87 N
ATOM 17 C5 A B1582 20.842 -50.755 1.429 1.00 46.45 C
ATOM 18 C6 A B1582 22.086 -50.412 0.866 1.00 47.28 C
ATOM 19 N6 A B1582 23.270 -50.688 1.431 1.00 49.92 N
ATOM 20 N1 A B1582 22.075 -49.785 -0.322 1.00 37.77 N
ATOM 21 C2 A B1582 20.894 -49.541 -0.867 1.00 41.97 C
ATOM 22 N3 A B1582 19.666 -49.804 -0.430 1.00 45.37 N
ATOM 23 C4 A B1582 19.694 -50.423 0.743 1.00 43.29 C
ATOM 24 P G B1583 15.738 -55.359 0.474 1.00 45.76 P
ATOM 25 OP1 G B1583 14.625 -56.074 -0.206 1.00 54.43 O
ATOM 26 OP2 G B1583 16.027 -55.667 1.899 1.00 43.14 O
ATOM 27 O5' G B1583 17.059 -55.484 -0.389 1.00 42.05 O
TER
Atoms:
OP1: (33.162,-43.896,1.203)
OP2: (33.770,-44.619,-1.172)
C3': (31.253,-48.572,-2.079)
C1': (29.285,-49.205,-1.051)
C5': (31.184,-46.497,-0.675)
O4': (30.035,-48.516,-0.063)
C8: (26.974,-50.008,-0.427)
O2': (29.422,-49.418,-3.478)
C6: (24.804,-47.318,-0.753)
C5: (25.803,-48.293,-0.671)
C4: (27.088,-47.910,-0.977)
P: (32.770,-44.522,-0.086)
C4': (31.243,-47.988,-0.688)
C2': (29.776,-48.626,-2.372)
C2: (26.477,-45.855,-1.394)
N1: (25.183,-46.073,-1.132)
N3: (27.504,-46.694,-1.339)
N6: (23.522,-47.576,-0.466)
N7: (25.740,-49.621,-0.313)
N9: (27.845,-49.026,-0.807)
O5': (32.141,-45.946,0.195)
O3': (31.750,-49.899,-2.007)
OP2: (33.770,-44.619,-1.172)
C3': (31.253,-48.572,-2.079)
C1': (29.285,-49.205,-1.051)
C5': (31.184,-46.497,-0.675)
O4': (30.035,-48.516,-0.063)
C8: (26.974,-50.008,-0.427)
O2': (29.422,-49.418,-3.478)
C6: (24.804,-47.318,-0.753)
C5: (25.803,-48.293,-0.671)
C4: (27.088,-47.910,-0.977)
P: (32.770,-44.522,-0.086)
C4': (31.243,-47.988,-0.688)
C2': (29.776,-48.626,-2.372)
C2: (26.477,-45.855,-1.394)
N1: (25.183,-46.073,-1.132)
N3: (27.504,-46.694,-1.339)
N6: (23.522,-47.576,-0.466)
N7: (25.740,-49.621,-0.313)
N9: (27.845,-49.026,-0.807)
O5': (32.141,-45.946,0.195)
O3': (31.750,-49.899,-2.007)
OP1: (15.397,-54.379,5.908)
OP2: (17.940,-54.398,5.808)
C3': (16.253,-52.883,1.038)
C1': (17.181,-50.743,1.189)
C5': (15.383,-52.889,3.425)
O4': (16.439,-51.006,2.368)
C8: (19.179,-51.435,2.603)
O2': (15.681,-51.218,-0.594)
C6: (22.086,-50.412,0.866)
C5: (20.842,-50.755,1.429)
C4: (19.694,-50.423,0.743)
P: (16.668,-53.682,5.570)
C4': (15.567,-52.135,2.146)
C2': (16.748,-51.766,0.147)
C2: (20.894,-49.541,-0.867)
N1: (22.075,-49.785,-0.322)
N3: (19.666,-49.804,-0.430)
N6: (23.270,-50.688,1.431)
N7: (20.498,-51.402,2.604)
N9: (18.620,-50.856,1.499)
O5': (16.620,-53.139,4.068)
O3': (15.415,-53.793,0.388)
OP2: (17.940,-54.398,5.808)
C3': (16.253,-52.883,1.038)
C1': (17.181,-50.743,1.189)
C5': (15.383,-52.889,3.425)
O4': (16.439,-51.006,2.368)
C8: (19.179,-51.435,2.603)
O2': (15.681,-51.218,-0.594)
C6: (22.086,-50.412,0.866)
C5: (20.842,-50.755,1.429)
C4: (19.694,-50.423,0.743)
P: (16.668,-53.682,5.570)
C4': (15.567,-52.135,2.146)
C2': (16.748,-51.766,0.147)
C2: (20.894,-49.541,-0.867)
N1: (22.075,-49.785,-0.322)
N3: (19.666,-49.804,-0.430)
N6: (23.270,-50.688,1.431)
N7: (20.498,-51.402,2.604)
N9: (18.620,-50.856,1.499)
O5': (16.620,-53.139,4.068)
O3': (15.415,-53.793,0.388)
Image (generated by PyMOL):