Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A412:A428
Extra
PDB:
ATOM 1 O3' G A 411 -122.902 34.240 -74.055 1.00 71.66 O
ATOM 2 P A A 412 -123.417 33.103 -73.044 1.00 57.41 P
ATOM 3 OP1 A A 412 -123.724 33.777 -71.764 1.00 57.41 O
ATOM 4 OP2 A A 412 -122.414 32.013 -73.058 1.00 57.41 O
ATOM 5 O5' A A 412 -124.763 32.593 -73.724 1.00 57.41 O
ATOM 6 C5' A A 412 -124.959 32.704 -75.121 1.00 57.41 C
ATOM 7 C4' A A 412 -125.324 31.382 -75.744 1.00 57.41 C
ATOM 8 O4' A A 412 -124.310 31.011 -76.702 1.00 57.41 O
ATOM 9 C3' A A 412 -125.404 30.183 -74.807 1.00 57.41 C
ATOM 10 O3' A A 412 -126.638 30.106 -74.105 1.00 57.41 O
ATOM 11 C2' A A 412 -125.170 29.009 -75.754 1.00 57.41 C
ATOM 12 O2' A A 412 -126.365 28.652 -76.432 1.00 57.41 O
ATOM 13 C1' A A 412 -124.199 29.609 -76.766 1.00 57.41 C
ATOM 14 N9 A A 412 -122.802 29.237 -76.500 1.00 57.21 N
ATOM 15 C8 A A 412 -121.746 30.072 -76.215 1.00 57.21 C
ATOM 16 N7 A A 412 -120.608 29.432 -76.066 1.00 57.21 N
ATOM 17 C5 A A 412 -120.932 28.092 -76.277 1.00 57.21 C
ATOM 18 C6 A A 412 -120.166 26.905 -76.260 1.00 57.21 C
ATOM 19 N6 A A 412 -118.855 26.847 -76.013 1.00 57.21 N
ATOM 20 N1 A A 412 -120.825 25.750 -76.517 1.00 57.21 N
ATOM 21 C2 A A 412 -122.146 25.780 -76.766 1.00 57.21 C
ATOM 22 N3 A A 412 -122.968 26.824 -76.806 1.00 57.21 N
ATOM 23 C4 A A 412 -122.290 27.961 -76.553 1.00 57.21 C
ATOM 24 P A A 413 -126.661 29.775 -72.528 1.00 49.84 P
ATOM 25 OP1 A A 413 -127.919 30.330 -71.983 1.00 49.84 O
ATOM 26 OP2 A A 413 -125.369 30.254 -71.964 1.00 49.84 O
ATOM 27 O5' A A 413 -126.716 28.184 -72.492 1.00 49.84 O
TER
ATOM 1 O3' U B 427 -109.793 36.410 -77.019 1.00 54.88 O
ATOM 2 P A B 428 -109.264 35.166 -76.121 1.00 36.97 P
ATOM 3 OP1 A B 428 -108.952 35.685 -74.760 1.00 36.97 O
ATOM 4 OP2 A B 428 -108.187 34.523 -76.894 1.00 36.97 O
ATOM 5 O5' A B 428 -110.512 34.189 -76.057 1.00 36.97 O
ATOM 6 C5' A B 428 -110.562 33.046 -76.884 1.00 36.97 C
ATOM 7 C4' A B 428 -110.741 31.800 -76.077 1.00 36.97 C
ATOM 8 O4' A B 428 -111.569 32.081 -74.930 1.00 36.97 O
ATOM 9 C3' A B 428 -111.465 30.662 -76.775 1.00 36.97 C
ATOM 10 O3' A B 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 11 C2' A B 428 -111.989 29.848 -75.614 1.00 36.97 C
ATOM 12 O2' A B 428 -110.956 29.069 -75.037 1.00 36.97 O
ATOM 13 C1' A B 428 -112.371 30.949 -74.642 1.00 36.97 C
ATOM 14 N9 A B 428 -113.776 31.319 -74.797 1.00 37.54 N
ATOM 15 C8 A B 428 -114.328 32.566 -74.874 1.00 37.54 C
ATOM 16 N7 A B 428 -115.631 32.539 -75.006 1.00 37.54 N
ATOM 17 C5 A B 428 -115.934 31.191 -75.029 1.00 37.54 C
ATOM 18 C6 A B 428 -117.162 30.541 -75.151 1.00 37.54 C
ATOM 19 N6 A B 428 -118.318 31.216 -75.276 1.00 37.54 N
ATOM 20 N1 A B 428 -117.126 29.187 -75.138 1.00 37.54 N
ATOM 21 C2 A B 428 -115.929 28.578 -75.007 1.00 37.54 C
ATOM 22 N3 A B 428 -114.706 29.094 -74.887 1.00 37.54 N
ATOM 23 C4 A B 428 -114.795 30.423 -74.908 1.00 37.54 C
ATOM 24 P A B 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 25 OP1 A B 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 26 OP2 A B 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 27 O5' A B 429 -112.264 28.829 -79.191 1.00 43.97 O
TER
ATOM 2 P A A 412 -123.417 33.103 -73.044 1.00 57.41 P
ATOM 3 OP1 A A 412 -123.724 33.777 -71.764 1.00 57.41 O
ATOM 4 OP2 A A 412 -122.414 32.013 -73.058 1.00 57.41 O
ATOM 5 O5' A A 412 -124.763 32.593 -73.724 1.00 57.41 O
ATOM 6 C5' A A 412 -124.959 32.704 -75.121 1.00 57.41 C
ATOM 7 C4' A A 412 -125.324 31.382 -75.744 1.00 57.41 C
ATOM 8 O4' A A 412 -124.310 31.011 -76.702 1.00 57.41 O
ATOM 9 C3' A A 412 -125.404 30.183 -74.807 1.00 57.41 C
ATOM 10 O3' A A 412 -126.638 30.106 -74.105 1.00 57.41 O
ATOM 11 C2' A A 412 -125.170 29.009 -75.754 1.00 57.41 C
ATOM 12 O2' A A 412 -126.365 28.652 -76.432 1.00 57.41 O
ATOM 13 C1' A A 412 -124.199 29.609 -76.766 1.00 57.41 C
ATOM 14 N9 A A 412 -122.802 29.237 -76.500 1.00 57.21 N
ATOM 15 C8 A A 412 -121.746 30.072 -76.215 1.00 57.21 C
ATOM 16 N7 A A 412 -120.608 29.432 -76.066 1.00 57.21 N
ATOM 17 C5 A A 412 -120.932 28.092 -76.277 1.00 57.21 C
ATOM 18 C6 A A 412 -120.166 26.905 -76.260 1.00 57.21 C
ATOM 19 N6 A A 412 -118.855 26.847 -76.013 1.00 57.21 N
ATOM 20 N1 A A 412 -120.825 25.750 -76.517 1.00 57.21 N
ATOM 21 C2 A A 412 -122.146 25.780 -76.766 1.00 57.21 C
ATOM 22 N3 A A 412 -122.968 26.824 -76.806 1.00 57.21 N
ATOM 23 C4 A A 412 -122.290 27.961 -76.553 1.00 57.21 C
ATOM 24 P A A 413 -126.661 29.775 -72.528 1.00 49.84 P
ATOM 25 OP1 A A 413 -127.919 30.330 -71.983 1.00 49.84 O
ATOM 26 OP2 A A 413 -125.369 30.254 -71.964 1.00 49.84 O
ATOM 27 O5' A A 413 -126.716 28.184 -72.492 1.00 49.84 O
TER
ATOM 1 O3' U B 427 -109.793 36.410 -77.019 1.00 54.88 O
ATOM 2 P A B 428 -109.264 35.166 -76.121 1.00 36.97 P
ATOM 3 OP1 A B 428 -108.952 35.685 -74.760 1.00 36.97 O
ATOM 4 OP2 A B 428 -108.187 34.523 -76.894 1.00 36.97 O
ATOM 5 O5' A B 428 -110.512 34.189 -76.057 1.00 36.97 O
ATOM 6 C5' A B 428 -110.562 33.046 -76.884 1.00 36.97 C
ATOM 7 C4' A B 428 -110.741 31.800 -76.077 1.00 36.97 C
ATOM 8 O4' A B 428 -111.569 32.081 -74.930 1.00 36.97 O
ATOM 9 C3' A B 428 -111.465 30.662 -76.775 1.00 36.97 C
ATOM 10 O3' A B 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 11 C2' A B 428 -111.989 29.848 -75.614 1.00 36.97 C
ATOM 12 O2' A B 428 -110.956 29.069 -75.037 1.00 36.97 O
ATOM 13 C1' A B 428 -112.371 30.949 -74.642 1.00 36.97 C
ATOM 14 N9 A B 428 -113.776 31.319 -74.797 1.00 37.54 N
ATOM 15 C8 A B 428 -114.328 32.566 -74.874 1.00 37.54 C
ATOM 16 N7 A B 428 -115.631 32.539 -75.006 1.00 37.54 N
ATOM 17 C5 A B 428 -115.934 31.191 -75.029 1.00 37.54 C
ATOM 18 C6 A B 428 -117.162 30.541 -75.151 1.00 37.54 C
ATOM 19 N6 A B 428 -118.318 31.216 -75.276 1.00 37.54 N
ATOM 20 N1 A B 428 -117.126 29.187 -75.138 1.00 37.54 N
ATOM 21 C2 A B 428 -115.929 28.578 -75.007 1.00 37.54 C
ATOM 22 N3 A B 428 -114.706 29.094 -74.887 1.00 37.54 N
ATOM 23 C4 A B 428 -114.795 30.423 -74.908 1.00 37.54 C
ATOM 24 P A B 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 25 OP1 A B 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 26 OP2 A B 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 27 O5' A B 429 -112.264 28.829 -79.191 1.00 43.97 O
TER
Atoms:
OP1: (-123.724,33.777,-71.764)
OP2: (-122.414,32.013,-73.058)
C3': (-125.404,30.183,-74.807)
C1': (-124.199,29.609,-76.766)
C5': (-124.959,32.704,-75.121)
O4': (-124.310,31.011,-76.702)
C8: (-121.746,30.072,-76.215)
O2': (-126.365,28.652,-76.432)
C6: (-120.166,26.905,-76.260)
C5: (-120.932,28.092,-76.277)
C4: (-122.290,27.961,-76.553)
P: (-123.417,33.103,-73.044)
C4': (-125.324,31.382,-75.744)
C2': (-125.170,29.009,-75.754)
C2: (-122.146,25.780,-76.766)
N1: (-120.825,25.750,-76.517)
N3: (-122.968,26.824,-76.806)
N6: (-118.855,26.847,-76.013)
N7: (-120.608,29.432,-76.066)
N9: (-122.802,29.237,-76.500)
O5': (-124.763,32.593,-73.724)
O3': (-126.638,30.106,-74.105)
OP2: (-122.414,32.013,-73.058)
C3': (-125.404,30.183,-74.807)
C1': (-124.199,29.609,-76.766)
C5': (-124.959,32.704,-75.121)
O4': (-124.310,31.011,-76.702)
C8: (-121.746,30.072,-76.215)
O2': (-126.365,28.652,-76.432)
C6: (-120.166,26.905,-76.260)
C5: (-120.932,28.092,-76.277)
C4: (-122.290,27.961,-76.553)
P: (-123.417,33.103,-73.044)
C4': (-125.324,31.382,-75.744)
C2': (-125.170,29.009,-75.754)
C2: (-122.146,25.780,-76.766)
N1: (-120.825,25.750,-76.517)
N3: (-122.968,26.824,-76.806)
N6: (-118.855,26.847,-76.013)
N7: (-120.608,29.432,-76.066)
N9: (-122.802,29.237,-76.500)
O5': (-124.763,32.593,-73.724)
O3': (-126.638,30.106,-74.105)
OP1: (-108.952,35.685,-74.760)
OP2: (-108.187,34.523,-76.894)
C3': (-111.465,30.662,-76.775)
C1': (-112.371,30.949,-74.642)
C5': (-110.562,33.046,-76.884)
O4': (-111.569,32.081,-74.930)
C8: (-114.328,32.566,-74.874)
O2': (-110.956,29.069,-75.037)
C6: (-117.162,30.541,-75.151)
C5: (-115.934,31.191,-75.029)
C4: (-114.795,30.423,-74.908)
P: (-109.264,35.166,-76.121)
C4': (-110.741,31.800,-76.077)
C2': (-111.989,29.848,-75.614)
C2: (-115.929,28.578,-75.007)
N1: (-117.126,29.187,-75.138)
N3: (-114.706,29.094,-74.887)
N6: (-118.318,31.216,-75.276)
N7: (-115.631,32.539,-75.006)
N9: (-113.776,31.319,-74.797)
O5': (-110.512,34.189,-76.057)
O3': (-110.639,29.927,-77.647)
OP2: (-108.187,34.523,-76.894)
C3': (-111.465,30.662,-76.775)
C1': (-112.371,30.949,-74.642)
C5': (-110.562,33.046,-76.884)
O4': (-111.569,32.081,-74.930)
C8: (-114.328,32.566,-74.874)
O2': (-110.956,29.069,-75.037)
C6: (-117.162,30.541,-75.151)
C5: (-115.934,31.191,-75.029)
C4: (-114.795,30.423,-74.908)
P: (-109.264,35.166,-76.121)
C4': (-110.741,31.800,-76.077)
C2': (-111.989,29.848,-75.614)
C2: (-115.929,28.578,-75.007)
N1: (-117.126,29.187,-75.138)
N3: (-114.706,29.094,-74.887)
N6: (-118.318,31.216,-75.276)
N7: (-115.631,32.539,-75.006)
N9: (-113.776,31.319,-74.797)
O5': (-110.512,34.189,-76.057)
O3': (-110.639,29.927,-77.647)
Image (generated by PyMOL):