Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02623:02627
Extra
PDB:
ATOM 1 O3' A A2622 35.731 98.602 163.925 1.00 51.38 O
ATOM 2 P A A2623 36.410 97.147 163.877 1.00 51.28 P
ATOM 3 OP1 A A2623 35.509 96.207 164.592 1.00 52.65 O
ATOM 4 OP2 A A2623 37.824 97.265 164.301 1.00 48.97 O
ATOM 5 O5' A A2623 36.354 96.756 162.334 1.00 51.65 O
ATOM 6 C5' A A2623 35.088 96.623 161.649 1.00 51.23 C
ATOM 7 C4' A A2623 35.308 96.472 160.159 1.00 52.42 C
ATOM 8 O4' A A2623 35.993 97.651 159.652 1.00 52.24 O
ATOM 9 C3' A A2623 36.193 95.309 159.737 1.00 51.20 C
ATOM 10 O3' A A2623 35.444 94.097 159.645 1.00 52.15 O
ATOM 11 C2' A A2623 36.711 95.781 158.384 1.00 50.87 C
ATOM 12 O2' A A2623 35.752 95.627 157.353 1.00 51.04 O
ATOM 13 C1' A A2623 36.922 97.273 158.651 1.00 50.97 C
ATOM 14 N9 A A2623 38.263 97.584 159.145 1.00 52.12 N
ATOM 15 C8 A A2623 38.681 97.678 160.451 1.00 52.74 C
ATOM 16 N7 A A2623 39.954 97.959 160.581 1.00 52.18 N
ATOM 17 C5 A A2623 40.407 98.061 159.274 1.00 52.84 C
ATOM 18 C6 A A2623 41.674 98.341 158.729 1.00 54.34 C
ATOM 19 N6 A A2623 42.768 98.565 159.463 1.00 53.74 N
ATOM 20 N1 A A2623 41.782 98.382 157.383 1.00 54.22 N
ATOM 21 C2 A A2623 40.690 98.145 156.645 1.00 52.88 C
ATOM 22 N3 A A2623 39.451 97.863 157.038 1.00 52.76 N
ATOM 23 C4 A A2623 39.374 97.837 158.379 1.00 52.82 C
ATOM 24 P C A2624 36.150 92.689 159.981 1.00 53.64 P
ATOM 25 OP1 C A2624 37.205 92.401 158.978 1.00 52.89 O
ATOM 26 OP2 C A2624 35.053 91.703 160.188 1.00 52.03 O
ATOM 27 O5' C A2624 36.886 92.967 161.367 1.00 54.35 O
TER
ATOM 1 O3' C B2626 44.678 99.004 170.976 1.00 52.28 O
ATOM 2 P A B2627 44.632 100.515 170.441 1.00 52.87 P
ATOM 3 OP1 A B2627 45.214 101.387 171.495 1.00 52.75 O
ATOM 4 OP2 A B2627 43.255 100.779 169.950 1.00 51.45 O
ATOM 5 O5' A B2627 45.637 100.493 169.203 1.00 53.63 O
ATOM 6 C5' A B2627 47.013 100.106 169.384 1.00 52.41 C
ATOM 7 C4' A B2627 47.633 99.738 168.060 1.00 53.17 C
ATOM 8 O4' A B2627 46.926 98.603 167.496 1.00 54.57 O
ATOM 9 C3' A B2627 47.553 100.795 166.973 1.00 52.58 C
ATOM 10 O3' A B2627 48.579 101.766 167.112 1.00 52.53 O
ATOM 11 C2' A B2627 47.701 99.957 165.709 1.00 53.56 C
ATOM 12 O2' A B2627 49.029 99.552 165.437 1.00 52.38 O
ATOM 13 C1' A B2627 46.880 98.725 166.083 1.00 53.51 C
ATOM 14 N9 A B2627 45.484 98.873 165.687 1.00 53.97 N
ATOM 15 C8 A B2627 44.416 99.249 166.462 1.00 55.17 C
ATOM 16 N7 A B2627 43.284 99.305 165.807 1.00 56.10 N
ATOM 17 C5 A B2627 43.628 98.934 164.517 1.00 54.85 C
ATOM 18 C6 A B2627 42.873 98.788 163.348 1.00 55.60 C
ATOM 19 N6 A B2627 41.559 99.003 163.284 1.00 55.64 N
ATOM 20 N1 A B2627 43.522 98.406 162.228 1.00 56.04 N
ATOM 21 C2 A B2627 44.841 98.186 162.293 1.00 56.35 C
ATOM 22 N3 A B2627 45.659 98.286 163.335 1.00 55.74 N
ATOM 23 C4 A B2627 44.980 98.667 164.430 1.00 54.68 C
ATOM 24 P U B2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 25 OP1 U B2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 26 OP2 U B2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 27 O5' U B2628 47.907 103.341 165.282 1.00 52.54 O
TER
ATOM 2 P A A2623 36.410 97.147 163.877 1.00 51.28 P
ATOM 3 OP1 A A2623 35.509 96.207 164.592 1.00 52.65 O
ATOM 4 OP2 A A2623 37.824 97.265 164.301 1.00 48.97 O
ATOM 5 O5' A A2623 36.354 96.756 162.334 1.00 51.65 O
ATOM 6 C5' A A2623 35.088 96.623 161.649 1.00 51.23 C
ATOM 7 C4' A A2623 35.308 96.472 160.159 1.00 52.42 C
ATOM 8 O4' A A2623 35.993 97.651 159.652 1.00 52.24 O
ATOM 9 C3' A A2623 36.193 95.309 159.737 1.00 51.20 C
ATOM 10 O3' A A2623 35.444 94.097 159.645 1.00 52.15 O
ATOM 11 C2' A A2623 36.711 95.781 158.384 1.00 50.87 C
ATOM 12 O2' A A2623 35.752 95.627 157.353 1.00 51.04 O
ATOM 13 C1' A A2623 36.922 97.273 158.651 1.00 50.97 C
ATOM 14 N9 A A2623 38.263 97.584 159.145 1.00 52.12 N
ATOM 15 C8 A A2623 38.681 97.678 160.451 1.00 52.74 C
ATOM 16 N7 A A2623 39.954 97.959 160.581 1.00 52.18 N
ATOM 17 C5 A A2623 40.407 98.061 159.274 1.00 52.84 C
ATOM 18 C6 A A2623 41.674 98.341 158.729 1.00 54.34 C
ATOM 19 N6 A A2623 42.768 98.565 159.463 1.00 53.74 N
ATOM 20 N1 A A2623 41.782 98.382 157.383 1.00 54.22 N
ATOM 21 C2 A A2623 40.690 98.145 156.645 1.00 52.88 C
ATOM 22 N3 A A2623 39.451 97.863 157.038 1.00 52.76 N
ATOM 23 C4 A A2623 39.374 97.837 158.379 1.00 52.82 C
ATOM 24 P C A2624 36.150 92.689 159.981 1.00 53.64 P
ATOM 25 OP1 C A2624 37.205 92.401 158.978 1.00 52.89 O
ATOM 26 OP2 C A2624 35.053 91.703 160.188 1.00 52.03 O
ATOM 27 O5' C A2624 36.886 92.967 161.367 1.00 54.35 O
TER
ATOM 1 O3' C B2626 44.678 99.004 170.976 1.00 52.28 O
ATOM 2 P A B2627 44.632 100.515 170.441 1.00 52.87 P
ATOM 3 OP1 A B2627 45.214 101.387 171.495 1.00 52.75 O
ATOM 4 OP2 A B2627 43.255 100.779 169.950 1.00 51.45 O
ATOM 5 O5' A B2627 45.637 100.493 169.203 1.00 53.63 O
ATOM 6 C5' A B2627 47.013 100.106 169.384 1.00 52.41 C
ATOM 7 C4' A B2627 47.633 99.738 168.060 1.00 53.17 C
ATOM 8 O4' A B2627 46.926 98.603 167.496 1.00 54.57 O
ATOM 9 C3' A B2627 47.553 100.795 166.973 1.00 52.58 C
ATOM 10 O3' A B2627 48.579 101.766 167.112 1.00 52.53 O
ATOM 11 C2' A B2627 47.701 99.957 165.709 1.00 53.56 C
ATOM 12 O2' A B2627 49.029 99.552 165.437 1.00 52.38 O
ATOM 13 C1' A B2627 46.880 98.725 166.083 1.00 53.51 C
ATOM 14 N9 A B2627 45.484 98.873 165.687 1.00 53.97 N
ATOM 15 C8 A B2627 44.416 99.249 166.462 1.00 55.17 C
ATOM 16 N7 A B2627 43.284 99.305 165.807 1.00 56.10 N
ATOM 17 C5 A B2627 43.628 98.934 164.517 1.00 54.85 C
ATOM 18 C6 A B2627 42.873 98.788 163.348 1.00 55.60 C
ATOM 19 N6 A B2627 41.559 99.003 163.284 1.00 55.64 N
ATOM 20 N1 A B2627 43.522 98.406 162.228 1.00 56.04 N
ATOM 21 C2 A B2627 44.841 98.186 162.293 1.00 56.35 C
ATOM 22 N3 A B2627 45.659 98.286 163.335 1.00 55.74 N
ATOM 23 C4 A B2627 44.980 98.667 164.430 1.00 54.68 C
ATOM 24 P U B2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 25 OP1 U B2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 26 OP2 U B2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 27 O5' U B2628 47.907 103.341 165.282 1.00 52.54 O
TER
Atoms:
OP1: (35.509,96.207,164.592)
OP2: (37.824,97.265,164.301)
C3': (36.193,95.309,159.737)
C1': (36.922,97.273,158.651)
C5': (35.088,96.623,161.649)
O4': (35.993,97.651,159.652)
C8: (38.681,97.678,160.451)
O2': (35.752,95.627,157.353)
C6: (41.674,98.341,158.729)
C5: (40.407,98.061,159.274)
C4: (39.374,97.837,158.379)
P: (36.410,97.147,163.877)
C4': (35.308,96.472,160.159)
C2': (36.711,95.781,158.384)
C2: (40.690,98.145,156.645)
N1: (41.782,98.382,157.383)
N3: (39.451,97.863,157.038)
N6: (42.768,98.565,159.463)
N7: (39.954,97.959,160.581)
N9: (38.263,97.584,159.145)
O5': (36.354,96.756,162.334)
O3': (35.444,94.097,159.645)
OP2: (37.824,97.265,164.301)
C3': (36.193,95.309,159.737)
C1': (36.922,97.273,158.651)
C5': (35.088,96.623,161.649)
O4': (35.993,97.651,159.652)
C8: (38.681,97.678,160.451)
O2': (35.752,95.627,157.353)
C6: (41.674,98.341,158.729)
C5: (40.407,98.061,159.274)
C4: (39.374,97.837,158.379)
P: (36.410,97.147,163.877)
C4': (35.308,96.472,160.159)
C2': (36.711,95.781,158.384)
C2: (40.690,98.145,156.645)
N1: (41.782,98.382,157.383)
N3: (39.451,97.863,157.038)
N6: (42.768,98.565,159.463)
N7: (39.954,97.959,160.581)
N9: (38.263,97.584,159.145)
O5': (36.354,96.756,162.334)
O3': (35.444,94.097,159.645)
OP1: (45.214,101.387,171.495)
OP2: (43.255,100.779,169.950)
C3': (47.553,100.795,166.973)
C1': (46.880,98.725,166.083)
C5': (47.013,100.106,169.384)
O4': (46.926,98.603,167.496)
C8: (44.416,99.249,166.462)
O2': (49.029,99.552,165.437)
C6: (42.873,98.788,163.348)
C5: (43.628,98.934,164.517)
C4: (44.980,98.667,164.430)
P: (44.632,100.515,170.441)
C4': (47.633,99.738,168.060)
C2': (47.701,99.957,165.709)
C2: (44.841,98.186,162.293)
N1: (43.522,98.406,162.228)
N3: (45.659,98.286,163.335)
N6: (41.559,99.003,163.284)
N7: (43.284,99.305,165.807)
N9: (45.484,98.873,165.687)
O5': (45.637,100.493,169.203)
O3': (48.579,101.766,167.112)
OP2: (43.255,100.779,169.950)
C3': (47.553,100.795,166.973)
C1': (46.880,98.725,166.083)
C5': (47.013,100.106,169.384)
O4': (46.926,98.603,167.496)
C8: (44.416,99.249,166.462)
O2': (49.029,99.552,165.437)
C6: (42.873,98.788,163.348)
C5: (43.628,98.934,164.517)
C4: (44.980,98.667,164.430)
P: (44.632,100.515,170.441)
C4': (47.633,99.738,168.060)
C2': (47.701,99.957,165.709)
C2: (44.841,98.186,162.293)
N1: (43.522,98.406,162.228)
N3: (45.659,98.286,163.335)
N6: (41.559,99.003,163.284)
N7: (43.284,99.305,165.807)
N9: (45.484,98.873,165.687)
O5': (45.637,100.493,169.203)
O3': (48.579,101.766,167.112)
Image (generated by PyMOL):