ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A754:A882

Extra

PDB:
ATOM 1 O3' A A 753 65.018 121.403 75.303 1.00 30.02 O
ATOM 2 P A A 754 65.532 122.910 75.469 1.00 32.19 P
ATOM 3 OP1 A A 754 64.966 123.423 76.740 1.00 31.90 O
ATOM 4 OP2 A A 754 65.333 123.671 74.205 1.00 30.68 O
ATOM 5 O5' A A 754 67.090 122.705 75.667 1.00 30.44 O
ATOM 6 C5' A A 754 67.892 122.310 74.554 1.00 33.54 C
ATOM 7 C4' A A 754 68.815 121.200 74.946 1.00 34.79 C
ATOM 8 O4' A A 754 68.102 119.939 74.967 1.00 36.76 O
ATOM 9 C3' A A 754 69.871 120.913 73.917 1.00 35.37 C
ATOM 10 O3' A A 754 70.855 121.934 73.916 1.00 33.48 O
ATOM 11 C2' A A 754 70.353 119.538 74.371 1.00 37.78 C
ATOM 12 O2' A A 754 71.192 119.545 75.522 1.00 39.49 O
ATOM 13 C1' A A 754 69.027 118.886 74.765 1.00 37.56 C
ATOM 14 N9 A A 754 68.527 117.999 73.719 1.00 38.84 N
ATOM 15 C8 A A 754 67.826 118.335 72.592 1.00 39.75 C
ATOM 16 N7 A A 754 67.585 117.316 71.795 1.00 40.61 N
ATOM 17 C5 A A 754 68.151 116.235 72.453 1.00 38.86 C
ATOM 18 C6 A A 754 68.246 114.876 72.121 1.00 37.86 C
ATOM 19 N6 A A 754 67.805 114.354 70.974 1.00 38.85 N
ATOM 20 N1 A A 754 68.836 114.062 73.007 1.00 37.67 N
ATOM 21 C2 A A 754 69.325 114.585 74.129 1.00 38.17 C
ATOM 22 N3 A A 754 69.327 115.846 74.545 1.00 39.04 N
ATOM 23 C4 A A 754 68.714 116.635 73.652 1.00 39.28 C
ATOM 24 P U A 755 71.718 122.198 72.591 1.00 35.99 P
ATOM 25 OP1 U A 755 72.951 122.870 73.050 1.00 35.13 O
ATOM 26 OP2 U A 755 70.894 122.824 71.522 1.00 33.70 O
ATOM 27 O5' U A 755 72.081 120.723 72.132 1.00 35.45 O
TER

ATOM 1 O3' A B 881 59.363 117.420 62.498 1.00 37.72 O
ATOM 2 P A B 882 60.583 117.720 63.503 1.00 37.81 P
ATOM 3 OP1 A B 882 59.991 117.708 64.857 1.00 37.68 O
ATOM 4 OP2 A B 882 61.390 118.896 63.067 1.00 36.42 O
ATOM 5 O5' A B 882 61.488 116.419 63.386 1.00 35.50 O
ATOM 6 C5' A B 882 61.918 115.914 62.109 1.00 32.59 C
ATOM 7 C4' A B 882 63.103 115.005 62.298 1.00 29.70 C
ATOM 8 O4' A B 882 64.219 115.771 62.813 1.00 28.43 O
ATOM 9 C3' A B 882 62.882 113.922 63.340 1.00 29.93 C
ATOM 10 O3' A B 882 62.204 112.804 62.779 1.00 30.17 O
ATOM 11 C2' A B 882 64.304 113.604 63.785 1.00 29.28 C
ATOM 12 O2' A B 882 64.986 112.796 62.849 1.00 32.32 O
ATOM 13 C1' A B 882 64.940 114.994 63.758 1.00 27.92 C
ATOM 14 N9 A B 882 64.935 115.683 65.054 1.00 27.75 N
ATOM 15 C8 A B 882 64.156 116.732 65.476 1.00 27.85 C
ATOM 16 N7 A B 882 64.423 117.133 66.692 1.00 28.20 N
ATOM 17 C5 A B 882 65.443 116.296 67.104 1.00 26.83 C
ATOM 18 C6 A B 882 66.170 116.225 68.302 1.00 27.28 C
ATOM 19 N6 A B 882 65.987 117.050 69.331 1.00 26.42 N
ATOM 20 N1 A B 882 67.107 115.269 68.406 1.00 28.07 N
ATOM 21 C2 A B 882 67.298 114.450 67.367 1.00 28.76 C
ATOM 22 N3 A B 882 66.687 114.424 66.181 1.00 27.38 N
ATOM 23 C4 A B 882 65.759 115.387 66.112 1.00 26.98 C
ATOM 24 P C B 883 60.936 112.157 63.534 1.00 29.80 P
ATOM 25 OP1 C B 883 60.352 111.227 62.569 1.00 30.52 O
ATOM 26 OP2 C B 883 60.060 113.190 64.162 1.00 31.08 O
ATOM 27 O5' C B 883 61.602 111.264 64.669 1.00 28.73 O
TER

Atoms:
OP1: (64.966,123.423,76.740)
OP2: (65.333,123.671,74.205)
C3': (69.871,120.913,73.917)
C1': (69.027,118.886,74.765)
C5': (67.892,122.310,74.554)
O4': (68.102,119.939,74.967)
C8: (67.826,118.335,72.592)
O2': (71.192,119.545,75.522)
C6: (68.246,114.876,72.121)
C5: (68.151,116.235,72.453)
C4: (68.714,116.635,73.652)
P: (65.532,122.910,75.469)
C4': (68.815,121.200,74.946)
C2': (70.353,119.538,74.371)
C2: (69.325,114.585,74.129)
N1: (68.836,114.062,73.007)
N3: (69.327,115.846,74.545)
N6: (67.805,114.354,70.974)
N7: (67.585,117.316,71.795)
N9: (68.527,117.999,73.719)
O5': (67.090,122.705,75.667)
O3': (70.855,121.934,73.916)
OP1: (59.991,117.708,64.857)
OP2: (61.390,118.896,63.067)
C3': (62.882,113.922,63.340)
C1': (64.940,114.994,63.758)
C5': (61.918,115.914,62.109)
O4': (64.219,115.771,62.813)
C8: (64.156,116.732,65.476)
O2': (64.986,112.796,62.849)
C6: (66.170,116.225,68.302)
C5: (65.443,116.296,67.104)
C4: (65.759,115.387,66.112)
P: (60.583,117.720,63.503)
C4': (63.103,115.005,62.298)
C2': (64.304,113.604,63.785)
C2: (67.298,114.450,67.367)
N1: (67.107,115.269,68.406)
N3: (66.687,114.424,66.181)
N6: (65.987,117.050,69.331)
N7: (64.423,117.133,66.692)
N9: (64.935,115.683,65.054)
O5': (61.488,116.419,63.386)
O3': (62.204,112.804,62.779)
Image (generated by PyMOL):
PyMOL image
show in jmol