ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02271:02301

Extra

PDB:
ATOM 1 O3' A A2270 72.065 77.310 64.700 1.00 37.63 O
ATOM 2 P A A2271 72.923 77.237 63.347 1.00 39.53 P
ATOM 3 OP1 A A2271 72.326 76.182 62.478 1.00 37.84 O
ATOM 4 OP2 A A2271 74.360 77.160 63.718 1.00 41.14 O
ATOM 5 O5' A A2271 72.666 78.640 62.643 1.00 40.07 O
ATOM 6 C5' A A2271 71.363 79.002 62.143 1.00 37.78 C
ATOM 7 C4' A A2271 71.397 80.407 61.581 1.00 38.08 C
ATOM 8 O4' A A2271 71.656 81.355 62.655 1.00 37.35 O
ATOM 9 C3' A A2271 72.500 80.674 60.570 1.00 35.58 C
ATOM 10 O3' A A2271 72.112 80.272 59.266 1.00 34.75 O
ATOM 11 C2' A A2271 72.677 82.179 60.683 1.00 35.95 C
ATOM 12 O2' A A2271 71.646 82.867 60.002 1.00 35.02 O
ATOM 13 C1' A A2271 72.509 82.384 62.192 1.00 36.10 C
ATOM 14 N9 A A2271 73.756 82.300 62.955 1.00 37.24 N
ATOM 15 C8 A A2271 74.280 81.194 63.579 1.00 36.86 C
ATOM 16 N7 A A2271 75.410 81.421 64.200 1.00 37.64 N
ATOM 17 C5 A A2271 75.649 82.768 63.974 1.00 38.29 C
ATOM 18 C6 A A2271 76.686 83.622 64.378 1.00 39.64 C
ATOM 19 N6 A A2271 77.718 83.228 65.124 1.00 40.11 N
ATOM 20 N1 A A2271 76.627 84.915 63.988 1.00 40.86 N
ATOM 21 C2 A A2271 75.594 85.309 63.238 1.00 40.84 C
ATOM 22 N3 A A2271 74.556 84.600 62.793 1.00 41.33 N
ATOM 23 C4 A A2271 74.642 83.321 63.203 1.00 39.46 C
ATOM 24 P C A2272 73.207 79.657 58.262 1.00 35.22 P
ATOM 25 OP1 C A2272 72.495 79.346 56.996 1.00 35.51 O
ATOM 26 OP2 C A2272 73.968 78.597 58.958 1.00 37.45 O
ATOM 27 O5' C A2272 74.219 80.852 57.990 1.00 35.31 O
TER

ATOM 1 O3' G B2300 85.833 76.323 69.288 1.00 41.05 O
ATOM 2 P A B2301 84.903 76.843 70.488 1.00 39.87 P
ATOM 3 OP1 A B2301 85.780 77.146 71.654 1.00 34.62 O
ATOM 4 OP2 A B2301 83.788 75.873 70.635 1.00 38.07 O
ATOM 5 O5' A B2301 84.313 78.218 69.946 1.00 39.88 O
ATOM 6 C5' A B2301 85.111 79.416 69.944 1.00 40.20 C
ATOM 7 C4' A B2301 84.324 80.566 70.531 1.00 39.19 C
ATOM 8 O4' A B2301 83.114 80.736 69.743 1.00 40.28 O
ATOM 9 C3' A B2301 83.855 80.398 71.974 1.00 39.17 C
ATOM 10 O3' A B2301 83.740 81.692 72.568 1.00 38.80 O
ATOM 11 C2' A B2301 82.473 79.786 71.791 1.00 39.85 C
ATOM 12 O2' A B2301 81.605 79.982 72.890 1.00 40.18 O
ATOM 13 C1' A B2301 81.983 80.552 70.565 1.00 40.19 C
ATOM 14 N9 A B2301 80.956 79.875 69.777 1.00 41.55 N
ATOM 15 C8 A B2301 80.595 78.549 69.775 1.00 43.02 C
ATOM 16 N7 A B2301 79.604 78.274 68.964 1.00 43.90 N
ATOM 17 C5 A B2301 79.296 79.500 68.389 1.00 43.75 C
ATOM 18 C6 A B2301 78.323 79.889 67.451 1.00 44.66 C
ATOM 19 N6 A B2301 77.437 79.051 66.907 1.00 46.27 N
ATOM 20 N1 A B2301 78.287 81.187 67.089 1.00 45.43 N
ATOM 21 C2 A B2301 79.169 82.030 67.640 1.00 44.66 C
ATOM 22 N3 A B2301 80.120 81.789 68.535 1.00 42.60 N
ATOM 23 C4 A B2301 80.129 80.490 68.873 1.00 42.47 C
ATOM 24 P U B2302 83.739 81.849 74.168 1.00 40.48 P
ATOM 25 OP1 U B2302 85.099 82.258 74.580 1.00 41.90 O
ATOM 26 OP2 U B2302 83.126 80.647 74.785 1.00 41.29 O
ATOM 27 O5' U B2302 82.795 83.108 74.418 1.00 38.34 O
TER

Atoms:
OP1: (72.326,76.182,62.478)
OP2: (74.360,77.160,63.718)
C3': (72.500,80.674,60.570)
C1': (72.509,82.384,62.192)
C5': (71.363,79.002,62.143)
O4': (71.656,81.355,62.655)
C8: (74.280,81.194,63.579)
O2': (71.646,82.867,60.002)
C6: (76.686,83.622,64.378)
C5: (75.649,82.768,63.974)
C4: (74.642,83.321,63.203)
P: (72.923,77.237,63.347)
C4': (71.397,80.407,61.581)
C2': (72.677,82.179,60.683)
C2: (75.594,85.309,63.238)
N1: (76.627,84.915,63.988)
N3: (74.556,84.600,62.793)
N6: (77.718,83.228,65.124)
N7: (75.410,81.421,64.200)
N9: (73.756,82.300,62.955)
O5': (72.666,78.640,62.643)
O3': (72.112,80.272,59.266)
OP1: (85.780,77.146,71.654)
OP2: (83.788,75.873,70.635)
C3': (83.855,80.398,71.974)
C1': (81.983,80.552,70.565)
C5': (85.111,79.416,69.944)
O4': (83.114,80.736,69.743)
C8: (80.595,78.549,69.775)
O2': (81.605,79.982,72.890)
C6: (78.323,79.889,67.451)
C5: (79.296,79.500,68.389)
C4: (80.129,80.490,68.873)
P: (84.903,76.843,70.488)
C4': (84.324,80.566,70.531)
C2': (82.473,79.786,71.791)
C2: (79.169,82.030,67.640)
N1: (78.287,81.187,67.089)
N3: (80.120,81.789,68.535)
N6: (77.437,79.051,66.907)
N7: (79.604,78.274,68.964)
N9: (80.956,79.875,69.777)
O5': (84.313,78.218,69.946)
O3': (83.740,81.692,72.568)
Image (generated by PyMOL):
PyMOL image
show in jmol