Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:C8:D9
Extra
PDB:
ATOM 1 O3' A A 7 29.829 16.366 35.810 1.00 60.99 O
ATOM 2 P A A 8 31.039 15.504 36.398 1.00 59.63 P
ATOM 3 OP1 A A 8 31.505 14.558 35.366 1.00 63.58 O
ATOM 4 OP2 A A 8 30.627 14.993 37.722 1.00 59.85 O
ATOM 5 O5' A A 8 32.174 16.588 36.600 1.00 60.33 O
ATOM 6 C5' A A 8 32.558 17.423 35.527 1.00 58.77 C
ATOM 7 C4' A A 8 33.481 18.489 36.027 1.00 58.06 C
ATOM 8 O4' A A 8 32.743 19.359 36.920 1.00 56.04 O
ATOM 9 C3' A A 8 34.602 17.954 36.899 1.00 59.83 C
ATOM 10 O3' A A 8 35.691 17.485 36.119 1.00 58.82 O
ATOM 11 C2' A A 8 34.971 19.173 37.727 1.00 57.53 C
ATOM 12 O2' A A 8 35.779 20.081 37.016 1.00 60.47 O
ATOM 13 C1' A A 8 33.600 19.803 37.955 1.00 54.88 C
ATOM 14 N9 A A 8 33.042 19.410 39.241 1.00 49.70 N
ATOM 15 C8 A A 8 32.090 18.473 39.535 1.00 48.56 C
ATOM 16 N7 A A 8 31.842 18.363 40.817 1.00 47.77 N
ATOM 17 C5 A A 8 32.689 19.295 41.400 1.00 46.77 C
ATOM 18 C6 A A 8 32.910 19.674 42.737 1.00 45.95 C
ATOM 19 N6 A A 8 32.280 19.131 43.777 1.00 42.45 N
ATOM 20 N1 A A 8 33.814 20.644 42.971 1.00 47.34 N
ATOM 21 C2 A A 8 34.452 21.188 41.928 1.00 49.56 C
ATOM 22 N3 A A 8 34.336 20.914 40.633 1.00 48.34 N
ATOM 23 C4 A A 8 33.426 19.948 40.437 1.00 47.16 C
ATOM 24 P A A 9 36.764 16.489 36.776 1.00 61.01 P
ATOM 25 OP1 A A 9 37.873 16.292 35.817 1.00 58.49 O
ATOM 26 OP2 A A 9 36.020 15.311 37.289 1.00 62.66 O
ATOM 27 O5' A A 9 37.336 17.308 38.017 1.00 59.28 O
TER
ATOM 1 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 2 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 3 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 4 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 5 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
ATOM 6 C5' A B 9 22.987 15.387 47.391 1.00 45.51 C
ATOM 7 C4' A B 9 24.344 15.470 48.014 1.00 46.23 C
ATOM 8 O4' A B 9 25.266 14.726 47.186 1.00 44.25 O
ATOM 9 C3' A B 9 24.936 16.866 48.048 1.00 46.72 C
ATOM 10 O3' A B 9 24.526 17.529 49.224 1.00 44.44 O
ATOM 11 C2' A B 9 26.423 16.585 48.101 1.00 40.21 C
ATOM 12 O2' A B 9 26.862 16.263 49.407 1.00 34.36 O
ATOM 13 C1' A B 9 26.516 15.376 47.178 1.00 35.80 C
ATOM 14 N9 A B 9 26.806 15.776 45.811 1.00 32.67 N
ATOM 15 C8 A B 9 26.115 15.538 44.640 1.00 29.84 C
ATOM 16 N7 A B 9 26.736 15.971 43.566 1.00 27.38 N
ATOM 17 C5 A B 9 27.899 16.551 44.066 1.00 28.98 C
ATOM 18 C6 A B 9 29.002 17.174 43.447 1.00 28.08 C
ATOM 19 N6 A B 9 29.130 17.335 42.136 1.00 29.53 N
ATOM 20 N1 A B 9 29.994 17.637 44.248 1.00 30.85 N
ATOM 21 C2 A B 9 29.873 17.494 45.582 1.00 28.03 C
ATOM 22 N3 A B 9 28.891 16.931 46.279 1.00 27.72 N
ATOM 23 C4 A B 9 27.932 16.466 45.451 1.00 30.81 C
ATOM 24 P U B 10 23.731 18.910 49.107 1.00 49.03 P
ATOM 25 OP1 U B 10 23.286 19.181 50.504 1.00 44.71 O
ATOM 26 OP2 U B 10 22.737 18.783 47.996 1.00 37.40 O
ATOM 27 O5' U B 10 24.837 19.968 48.657 1.00 37.29 O
TER
ATOM 2 P A A 8 31.039 15.504 36.398 1.00 59.63 P
ATOM 3 OP1 A A 8 31.505 14.558 35.366 1.00 63.58 O
ATOM 4 OP2 A A 8 30.627 14.993 37.722 1.00 59.85 O
ATOM 5 O5' A A 8 32.174 16.588 36.600 1.00 60.33 O
ATOM 6 C5' A A 8 32.558 17.423 35.527 1.00 58.77 C
ATOM 7 C4' A A 8 33.481 18.489 36.027 1.00 58.06 C
ATOM 8 O4' A A 8 32.743 19.359 36.920 1.00 56.04 O
ATOM 9 C3' A A 8 34.602 17.954 36.899 1.00 59.83 C
ATOM 10 O3' A A 8 35.691 17.485 36.119 1.00 58.82 O
ATOM 11 C2' A A 8 34.971 19.173 37.727 1.00 57.53 C
ATOM 12 O2' A A 8 35.779 20.081 37.016 1.00 60.47 O
ATOM 13 C1' A A 8 33.600 19.803 37.955 1.00 54.88 C
ATOM 14 N9 A A 8 33.042 19.410 39.241 1.00 49.70 N
ATOM 15 C8 A A 8 32.090 18.473 39.535 1.00 48.56 C
ATOM 16 N7 A A 8 31.842 18.363 40.817 1.00 47.77 N
ATOM 17 C5 A A 8 32.689 19.295 41.400 1.00 46.77 C
ATOM 18 C6 A A 8 32.910 19.674 42.737 1.00 45.95 C
ATOM 19 N6 A A 8 32.280 19.131 43.777 1.00 42.45 N
ATOM 20 N1 A A 8 33.814 20.644 42.971 1.00 47.34 N
ATOM 21 C2 A A 8 34.452 21.188 41.928 1.00 49.56 C
ATOM 22 N3 A A 8 34.336 20.914 40.633 1.00 48.34 N
ATOM 23 C4 A A 8 33.426 19.948 40.437 1.00 47.16 C
ATOM 24 P A A 9 36.764 16.489 36.776 1.00 61.01 P
ATOM 25 OP1 A A 9 37.873 16.292 35.817 1.00 58.49 O
ATOM 26 OP2 A A 9 36.020 15.311 37.289 1.00 62.66 O
ATOM 27 O5' A A 9 37.336 17.308 38.017 1.00 59.28 O
TER
ATOM 1 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 2 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 3 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 4 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 5 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
ATOM 6 C5' A B 9 22.987 15.387 47.391 1.00 45.51 C
ATOM 7 C4' A B 9 24.344 15.470 48.014 1.00 46.23 C
ATOM 8 O4' A B 9 25.266 14.726 47.186 1.00 44.25 O
ATOM 9 C3' A B 9 24.936 16.866 48.048 1.00 46.72 C
ATOM 10 O3' A B 9 24.526 17.529 49.224 1.00 44.44 O
ATOM 11 C2' A B 9 26.423 16.585 48.101 1.00 40.21 C
ATOM 12 O2' A B 9 26.862 16.263 49.407 1.00 34.36 O
ATOM 13 C1' A B 9 26.516 15.376 47.178 1.00 35.80 C
ATOM 14 N9 A B 9 26.806 15.776 45.811 1.00 32.67 N
ATOM 15 C8 A B 9 26.115 15.538 44.640 1.00 29.84 C
ATOM 16 N7 A B 9 26.736 15.971 43.566 1.00 27.38 N
ATOM 17 C5 A B 9 27.899 16.551 44.066 1.00 28.98 C
ATOM 18 C6 A B 9 29.002 17.174 43.447 1.00 28.08 C
ATOM 19 N6 A B 9 29.130 17.335 42.136 1.00 29.53 N
ATOM 20 N1 A B 9 29.994 17.637 44.248 1.00 30.85 N
ATOM 21 C2 A B 9 29.873 17.494 45.582 1.00 28.03 C
ATOM 22 N3 A B 9 28.891 16.931 46.279 1.00 27.72 N
ATOM 23 C4 A B 9 27.932 16.466 45.451 1.00 30.81 C
ATOM 24 P U B 10 23.731 18.910 49.107 1.00 49.03 P
ATOM 25 OP1 U B 10 23.286 19.181 50.504 1.00 44.71 O
ATOM 26 OP2 U B 10 22.737 18.783 47.996 1.00 37.40 O
ATOM 27 O5' U B 10 24.837 19.968 48.657 1.00 37.29 O
TER
Atoms:
OP1: (31.505,14.558,35.366)
OP2: (30.627,14.993,37.722)
C3': (34.602,17.954,36.899)
C1': (33.600,19.803,37.955)
C5': (32.558,17.423,35.527)
O4': (32.743,19.359,36.920)
C8: (32.090,18.473,39.535)
O2': (35.779,20.081,37.016)
C6: (32.910,19.674,42.737)
C5: (32.689,19.295,41.400)
C4: (33.426,19.948,40.437)
P: (31.039,15.504,36.398)
C4': (33.481,18.489,36.027)
C2': (34.971,19.173,37.727)
C2: (34.452,21.188,41.928)
N1: (33.814,20.644,42.971)
N3: (34.336,20.914,40.633)
N6: (32.280,19.131,43.777)
N7: (31.842,18.363,40.817)
N9: (33.042,19.410,39.241)
O5': (32.174,16.588,36.600)
O3': (35.691,17.485,36.119)
OP2: (30.627,14.993,37.722)
C3': (34.602,17.954,36.899)
C1': (33.600,19.803,37.955)
C5': (32.558,17.423,35.527)
O4': (32.743,19.359,36.920)
C8: (32.090,18.473,39.535)
O2': (35.779,20.081,37.016)
C6: (32.910,19.674,42.737)
C5: (32.689,19.295,41.400)
C4: (33.426,19.948,40.437)
P: (31.039,15.504,36.398)
C4': (33.481,18.489,36.027)
C2': (34.971,19.173,37.727)
C2: (34.452,21.188,41.928)
N1: (33.814,20.644,42.971)
N3: (34.336,20.914,40.633)
N6: (32.280,19.131,43.777)
N7: (31.842,18.363,40.817)
N9: (33.042,19.410,39.241)
O5': (32.174,16.588,36.600)
O3': (35.691,17.485,36.119)
OP1: (20.792,15.914,45.199)
OP2: (22.605,15.016,43.647)
C3': (24.936,16.866,48.048)
C1': (26.516,15.376,47.178)
C5': (22.987,15.387,47.391)
O4': (25.266,14.726,47.186)
C8: (26.115,15.538,44.640)
O2': (26.862,16.263,49.407)
C6: (29.002,17.174,43.447)
C5: (27.899,16.551,44.066)
C4: (27.932,16.466,45.451)
P: (22.024,15.112,45.003)
C4': (24.344,15.470,48.014)
C2': (26.423,16.585,48.101)
C2: (29.873,17.494,45.582)
N1: (29.994,17.637,44.248)
N3: (28.891,16.931,46.279)
N6: (29.130,17.335,42.136)
N7: (26.736,15.971,43.566)
N9: (26.806,15.776,45.811)
O5': (23.068,15.737,46.016)
O3': (24.526,17.529,49.224)
OP2: (22.605,15.016,43.647)
C3': (24.936,16.866,48.048)
C1': (26.516,15.376,47.178)
C5': (22.987,15.387,47.391)
O4': (25.266,14.726,47.186)
C8: (26.115,15.538,44.640)
O2': (26.862,16.263,49.407)
C6: (29.002,17.174,43.447)
C5: (27.899,16.551,44.066)
C4: (27.932,16.466,45.451)
P: (22.024,15.112,45.003)
C4': (24.344,15.470,48.014)
C2': (26.423,16.585,48.101)
C2: (29.873,17.494,45.582)
N1: (29.994,17.637,44.248)
N3: (28.891,16.931,46.279)
N6: (29.130,17.335,42.136)
N7: (26.736,15.971,43.566)
N9: (26.806,15.776,45.811)
O5': (23.068,15.737,46.016)
O3': (24.526,17.529,49.224)
Image (generated by PyMOL):