Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1827:A1834
Extra
PDB:
ATOM 1 O3' G A1826 -113.451 -2.628 -4.206 1.00 38.91 O
ATOM 2 P U A1827 -112.873 -2.693 -5.704 1.00 37.25 P
ATOM 3 OP1 U A1827 -114.044 -2.692 -6.625 1.00 61.99 O
ATOM 4 OP2 U A1827 -111.876 -3.792 -5.777 1.00 62.10 O
ATOM 5 O5' U A1827 -112.110 -1.304 -5.876 1.00 45.10 O
ATOM 6 C5' U A1827 -112.756 -0.062 -5.509 1.00 45.10 C
ATOM 7 C4' U A1827 -111.759 1.077 -5.470 1.00 45.10 C
ATOM 8 O4' U A1827 -110.760 0.858 -4.446 1.00 45.10 O
ATOM 9 C3' U A1827 -110.966 1.306 -6.740 1.00 45.10 C
ATOM 10 O3' U A1827 -111.723 2.108 -7.622 1.00 45.10 O
ATOM 11 C2' U A1827 -109.730 2.047 -6.245 1.00 45.10 C
ATOM 12 O2' U A1827 -109.935 3.441 -6.130 1.00 45.10 O
ATOM 13 C1' U A1827 -109.541 1.459 -4.844 1.00 45.10 C
ATOM 14 N1 U A1827 -108.448 0.477 -4.746 1.00 43.02 N
ATOM 15 C2 U A1827 -107.176 0.962 -4.499 1.00 43.09 C
ATOM 16 O2 U A1827 -106.932 2.146 -4.351 1.00 43.10 O
ATOM 17 N3 U A1827 -106.198 0.009 -4.431 1.00 43.16 N
ATOM 18 C4 U A1827 -106.352 -1.346 -4.579 1.00 43.10 C
ATOM 19 O4 U A1827 -105.363 -2.066 -4.527 1.00 43.02 O
ATOM 20 C5 U A1827 -107.690 -1.776 -4.823 1.00 43.10 C
ATOM 21 C6 U A1827 -108.668 -0.874 -4.897 1.00 43.05 C
ATOM 22 P A A1828 -111.710 1.792 -9.184 1.00 61.18 P
ATOM 23 OP1 A A1828 -113.105 1.890 -9.646 1.00 28.85 O
ATOM 24 OP2 A A1828 -110.940 0.541 -9.422 1.00 29.13 O
ATOM 25 O5' A A1828 -110.907 3.016 -9.798 1.00 26.77 O
TER
ATOM 1 O3' U B1833 -101.587 -6.113 -8.347 1.00 22.39 O
ATOM 2 P A B1834 -102.065 -5.894 -6.829 1.00 47.13 P
ATOM 3 OP1 A B1834 -101.103 -6.612 -5.949 1.00 28.55 O
ATOM 4 OP2 A B1834 -103.521 -6.195 -6.731 1.00 28.55 O
ATOM 5 O5' A B1834 -101.862 -4.330 -6.593 1.00 26.72 O
ATOM 6 C5' A B1834 -100.606 -3.689 -6.900 1.00 26.72 C
ATOM 7 C4' A B1834 -100.742 -2.184 -6.787 1.00 26.72 C
ATOM 8 O4' A B1834 -101.732 -1.734 -7.750 1.00 26.72 O
ATOM 9 C3' A B1834 -101.170 -1.642 -5.425 1.00 26.72 C
ATOM 10 O3' A B1834 -100.453 -0.452 -5.132 1.00 26.72 O
ATOM 11 C2' A B1834 -102.652 -1.335 -5.610 1.00 26.72 C
ATOM 12 O2' A B1834 -103.084 -0.218 -4.872 1.00 26.72 O
ATOM 13 C1' A B1834 -102.736 -0.990 -7.092 1.00 26.72 C
ATOM 14 N9 A B1834 -104.035 -1.369 -7.647 1.00 56.65 N
ATOM 15 C8 A B1834 -104.463 -2.631 -7.969 1.00 56.65 C
ATOM 16 N7 A B1834 -105.694 -2.674 -8.409 1.00 56.65 N
ATOM 17 C5 A B1834 -106.103 -1.351 -8.385 1.00 56.65 C
ATOM 18 C6 A B1834 -107.310 -0.735 -8.729 1.00 56.65 C
ATOM 19 N6 A B1834 -108.378 -1.397 -9.180 1.00 56.65 N
ATOM 20 N1 A B1834 -107.391 0.601 -8.594 1.00 56.65 N
ATOM 21 C2 A B1834 -106.325 1.262 -8.144 1.00 56.65 C
ATOM 22 N3 A B1834 -105.137 0.797 -7.787 1.00 56.65 N
ATOM 23 C4 A B1834 -105.089 -0.535 -7.930 1.00 56.65 C
ATOM 24 P A B1835 -99.607 -0.345 -3.769 1.00 38.05 P
ATOM 25 OP1 A B1835 -98.331 -1.076 -4.009 1.00 30.98 O
ATOM 26 OP2 A B1835 -100.479 -0.745 -2.633 1.00 30.98 O
ATOM 27 O5' A B1835 -99.290 1.214 -3.651 1.00 39.85 O
TER
ATOM 2 P U A1827 -112.873 -2.693 -5.704 1.00 37.25 P
ATOM 3 OP1 U A1827 -114.044 -2.692 -6.625 1.00 61.99 O
ATOM 4 OP2 U A1827 -111.876 -3.792 -5.777 1.00 62.10 O
ATOM 5 O5' U A1827 -112.110 -1.304 -5.876 1.00 45.10 O
ATOM 6 C5' U A1827 -112.756 -0.062 -5.509 1.00 45.10 C
ATOM 7 C4' U A1827 -111.759 1.077 -5.470 1.00 45.10 C
ATOM 8 O4' U A1827 -110.760 0.858 -4.446 1.00 45.10 O
ATOM 9 C3' U A1827 -110.966 1.306 -6.740 1.00 45.10 C
ATOM 10 O3' U A1827 -111.723 2.108 -7.622 1.00 45.10 O
ATOM 11 C2' U A1827 -109.730 2.047 -6.245 1.00 45.10 C
ATOM 12 O2' U A1827 -109.935 3.441 -6.130 1.00 45.10 O
ATOM 13 C1' U A1827 -109.541 1.459 -4.844 1.00 45.10 C
ATOM 14 N1 U A1827 -108.448 0.477 -4.746 1.00 43.02 N
ATOM 15 C2 U A1827 -107.176 0.962 -4.499 1.00 43.09 C
ATOM 16 O2 U A1827 -106.932 2.146 -4.351 1.00 43.10 O
ATOM 17 N3 U A1827 -106.198 0.009 -4.431 1.00 43.16 N
ATOM 18 C4 U A1827 -106.352 -1.346 -4.579 1.00 43.10 C
ATOM 19 O4 U A1827 -105.363 -2.066 -4.527 1.00 43.02 O
ATOM 20 C5 U A1827 -107.690 -1.776 -4.823 1.00 43.10 C
ATOM 21 C6 U A1827 -108.668 -0.874 -4.897 1.00 43.05 C
ATOM 22 P A A1828 -111.710 1.792 -9.184 1.00 61.18 P
ATOM 23 OP1 A A1828 -113.105 1.890 -9.646 1.00 28.85 O
ATOM 24 OP2 A A1828 -110.940 0.541 -9.422 1.00 29.13 O
ATOM 25 O5' A A1828 -110.907 3.016 -9.798 1.00 26.77 O
TER
ATOM 1 O3' U B1833 -101.587 -6.113 -8.347 1.00 22.39 O
ATOM 2 P A B1834 -102.065 -5.894 -6.829 1.00 47.13 P
ATOM 3 OP1 A B1834 -101.103 -6.612 -5.949 1.00 28.55 O
ATOM 4 OP2 A B1834 -103.521 -6.195 -6.731 1.00 28.55 O
ATOM 5 O5' A B1834 -101.862 -4.330 -6.593 1.00 26.72 O
ATOM 6 C5' A B1834 -100.606 -3.689 -6.900 1.00 26.72 C
ATOM 7 C4' A B1834 -100.742 -2.184 -6.787 1.00 26.72 C
ATOM 8 O4' A B1834 -101.732 -1.734 -7.750 1.00 26.72 O
ATOM 9 C3' A B1834 -101.170 -1.642 -5.425 1.00 26.72 C
ATOM 10 O3' A B1834 -100.453 -0.452 -5.132 1.00 26.72 O
ATOM 11 C2' A B1834 -102.652 -1.335 -5.610 1.00 26.72 C
ATOM 12 O2' A B1834 -103.084 -0.218 -4.872 1.00 26.72 O
ATOM 13 C1' A B1834 -102.736 -0.990 -7.092 1.00 26.72 C
ATOM 14 N9 A B1834 -104.035 -1.369 -7.647 1.00 56.65 N
ATOM 15 C8 A B1834 -104.463 -2.631 -7.969 1.00 56.65 C
ATOM 16 N7 A B1834 -105.694 -2.674 -8.409 1.00 56.65 N
ATOM 17 C5 A B1834 -106.103 -1.351 -8.385 1.00 56.65 C
ATOM 18 C6 A B1834 -107.310 -0.735 -8.729 1.00 56.65 C
ATOM 19 N6 A B1834 -108.378 -1.397 -9.180 1.00 56.65 N
ATOM 20 N1 A B1834 -107.391 0.601 -8.594 1.00 56.65 N
ATOM 21 C2 A B1834 -106.325 1.262 -8.144 1.00 56.65 C
ATOM 22 N3 A B1834 -105.137 0.797 -7.787 1.00 56.65 N
ATOM 23 C4 A B1834 -105.089 -0.535 -7.930 1.00 56.65 C
ATOM 24 P A B1835 -99.607 -0.345 -3.769 1.00 38.05 P
ATOM 25 OP1 A B1835 -98.331 -1.076 -4.009 1.00 30.98 O
ATOM 26 OP2 A B1835 -100.479 -0.745 -2.633 1.00 30.98 O
ATOM 27 O5' A B1835 -99.290 1.214 -3.651 1.00 39.85 O
TER
Atoms:
C4: (-106.352,-1.346,-4.579)
N3: (-106.198,0.009,-4.431)
OP1: (-114.044,-2.692,-6.625)
OP2: (-111.876,-3.792,-5.777)
C2: (-107.176,0.962,-4.499)
C1': (-109.541,1.459,-4.844)
C3': (-110.966,1.306,-6.740)
O5': (-112.110,-1.304,-5.876)
O4': (-110.760,0.858,-4.446)
C5': (-112.756,-0.062,-5.509)
P: (-112.873,-2.693,-5.704)
C4': (-111.759,1.077,-5.470)
C2': (-109.730,2.047,-6.245)
O2': (-109.935,3.441,-6.130)
N1: (-108.448,0.477,-4.746)
O4: (-105.363,-2.066,-4.527)
O2: (-106.932,2.146,-4.351)
C6: (-108.668,-0.874,-4.897)
C5: (-107.690,-1.776,-4.823)
O3': (-111.723,2.108,-7.622)
N3: (-106.198,0.009,-4.431)
OP1: (-114.044,-2.692,-6.625)
OP2: (-111.876,-3.792,-5.777)
C2: (-107.176,0.962,-4.499)
C1': (-109.541,1.459,-4.844)
C3': (-110.966,1.306,-6.740)
O5': (-112.110,-1.304,-5.876)
O4': (-110.760,0.858,-4.446)
C5': (-112.756,-0.062,-5.509)
P: (-112.873,-2.693,-5.704)
C4': (-111.759,1.077,-5.470)
C2': (-109.730,2.047,-6.245)
O2': (-109.935,3.441,-6.130)
N1: (-108.448,0.477,-4.746)
O4: (-105.363,-2.066,-4.527)
O2: (-106.932,2.146,-4.351)
C6: (-108.668,-0.874,-4.897)
C5: (-107.690,-1.776,-4.823)
O3': (-111.723,2.108,-7.622)
OP1: (-101.103,-6.612,-5.949)
OP2: (-103.521,-6.195,-6.731)
C3': (-101.170,-1.642,-5.425)
C1': (-102.736,-0.990,-7.092)
C5': (-100.606,-3.689,-6.900)
O4': (-101.732,-1.734,-7.750)
C8: (-104.463,-2.631,-7.969)
O2': (-103.084,-0.218,-4.872)
C6: (-107.310,-0.735,-8.729)
C5: (-106.103,-1.351,-8.385)
C4: (-105.089,-0.535,-7.930)
P: (-102.065,-5.894,-6.829)
C4': (-100.742,-2.184,-6.787)
C2': (-102.652,-1.335,-5.610)
C2: (-106.325,1.262,-8.144)
N1: (-107.391,0.601,-8.594)
N3: (-105.137,0.797,-7.787)
N6: (-108.378,-1.397,-9.180)
N7: (-105.694,-2.674,-8.409)
N9: (-104.035,-1.369,-7.647)
O5': (-101.862,-4.330,-6.593)
O3': (-100.453,-0.452,-5.132)
OP2: (-103.521,-6.195,-6.731)
C3': (-101.170,-1.642,-5.425)
C1': (-102.736,-0.990,-7.092)
C5': (-100.606,-3.689,-6.900)
O4': (-101.732,-1.734,-7.750)
C8: (-104.463,-2.631,-7.969)
O2': (-103.084,-0.218,-4.872)
C6: (-107.310,-0.735,-8.729)
C5: (-106.103,-1.351,-8.385)
C4: (-105.089,-0.535,-7.930)
P: (-102.065,-5.894,-6.829)
C4': (-100.742,-2.184,-6.787)
C2': (-102.652,-1.335,-5.610)
C2: (-106.325,1.262,-8.144)
N1: (-107.391,0.601,-8.594)
N3: (-105.137,0.797,-7.787)
N6: (-108.378,-1.397,-9.180)
N7: (-105.694,-2.674,-8.409)
N9: (-104.035,-1.369,-7.647)
O5': (-101.862,-4.330,-6.593)
O3': (-100.453,-0.452,-5.132)
Image (generated by PyMOL):