ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02623:02627

Extra

PDB:
ATOM 1 O3' A A2622 35.686 98.580 163.769 1.00 58.10 O
ATOM 2 P A A2623 36.336 97.116 163.787 1.00 57.31 P
ATOM 3 OP1 A A2623 35.412 96.237 164.542 1.00 58.03 O
ATOM 4 OP2 A A2623 37.747 97.227 164.211 1.00 56.90 O
ATOM 5 O5' A A2623 36.288 96.664 162.262 1.00 58.86 O
ATOM 6 C5' A A2623 35.028 96.560 161.573 1.00 59.01 C
ATOM 7 C4' A A2623 35.252 96.440 160.086 1.00 59.44 C
ATOM 8 O4' A A2623 35.927 97.629 159.604 1.00 59.49 O
ATOM 9 C3' A A2623 36.144 95.298 159.638 1.00 58.79 C
ATOM 10 O3' A A2623 35.414 94.083 159.532 1.00 60.33 O
ATOM 11 C2' A A2623 36.621 95.797 158.286 1.00 59.38 C
ATOM 12 O2' A A2623 35.613 95.675 157.301 1.00 59.28 O
ATOM 13 C1' A A2623 36.846 97.278 158.589 1.00 59.20 C
ATOM 14 N9 A A2623 38.187 97.554 159.098 1.00 60.59 N
ATOM 15 C8 A A2623 38.585 97.627 160.411 1.00 60.99 C
ATOM 16 N7 A A2623 39.858 97.894 160.565 1.00 61.75 N
ATOM 17 C5 A A2623 40.334 98.002 159.267 1.00 62.59 C
ATOM 18 C6 A A2623 41.610 98.274 158.750 1.00 63.20 C
ATOM 19 N6 A A2623 42.683 98.493 159.510 1.00 64.06 N
ATOM 20 N1 A A2623 41.747 98.316 157.407 1.00 63.41 N
ATOM 21 C2 A A2623 40.667 98.095 156.646 1.00 63.32 C
ATOM 22 N3 A A2623 39.416 97.827 157.014 1.00 62.66 N
ATOM 23 C4 A A2623 39.315 97.795 158.353 1.00 62.15 C
ATOM 24 P C A2624 36.136 92.687 159.868 1.00 61.57 P
ATOM 25 OP1 C A2624 37.187 92.426 158.860 1.00 62.31 O
ATOM 26 OP2 C A2624 35.059 91.682 160.077 1.00 60.23 O
ATOM 27 O5' C A2624 36.887 92.964 161.245 1.00 62.18 O
TER

ATOM 1 O3' C B2626 44.650 98.972 170.838 1.00 59.37 O
ATOM 2 P A B2627 44.561 100.483 170.296 1.00 61.41 P
ATOM 3 OP1 A B2627 45.039 101.399 171.371 1.00 61.35 O
ATOM 4 OP2 A B2627 43.205 100.677 169.716 1.00 60.87 O
ATOM 5 O5' A B2627 45.622 100.521 169.111 1.00 60.04 O
ATOM 6 C5' A B2627 46.991 100.159 169.341 1.00 57.67 C
ATOM 7 C4' A B2627 47.634 99.746 168.045 1.00 56.99 C
ATOM 8 O4' A B2627 46.934 98.591 167.516 1.00 57.32 O
ATOM 9 C3' A B2627 47.548 100.765 166.924 1.00 55.61 C
ATOM 10 O3' A B2627 48.561 101.750 167.036 1.00 54.89 O
ATOM 11 C2' A B2627 47.707 99.891 165.691 1.00 55.87 C
ATOM 12 O2' A B2627 49.046 99.495 165.470 1.00 55.31 O
ATOM 13 C1' A B2627 46.887 98.667 166.102 1.00 55.59 C
ATOM 14 N9 A B2627 45.485 98.775 165.706 1.00 55.10 N
ATOM 15 C8 A B2627 44.405 99.091 166.493 1.00 55.71 C
ATOM 16 N7 A B2627 43.270 99.131 165.839 1.00 55.98 N
ATOM 17 C5 A B2627 43.627 98.818 164.536 1.00 54.73 C
ATOM 18 C6 A B2627 42.882 98.698 163.361 1.00 54.47 C
ATOM 19 N6 A B2627 41.568 98.899 163.297 1.00 55.16 N
ATOM 20 N1 A B2627 43.540 98.364 162.233 1.00 54.66 N
ATOM 21 C2 A B2627 44.860 98.172 162.295 1.00 54.12 C
ATOM 22 N3 A B2627 45.672 98.260 163.339 1.00 53.67 N
ATOM 23 C4 A B2627 44.986 98.589 164.442 1.00 54.31 C
ATOM 24 P U B2628 48.206 103.277 166.725 1.00 54.40 P
ATOM 25 OP1 U B2628 49.418 104.109 166.925 1.00 53.07 O
ATOM 26 OP2 U B2628 46.968 103.594 167.479 1.00 53.91 O
ATOM 27 O5' U B2628 47.856 103.255 165.174 1.00 53.21 O
TER

Atoms:
OP1: (35.412,96.237,164.542)
OP2: (37.747,97.227,164.211)
C3': (36.144,95.298,159.638)
C1': (36.846,97.278,158.589)
C5': (35.028,96.560,161.573)
O4': (35.927,97.629,159.604)
C8: (38.585,97.627,160.411)
O2': (35.613,95.675,157.301)
C6: (41.610,98.274,158.750)
C5: (40.334,98.002,159.267)
C4: (39.315,97.795,158.353)
P: (36.336,97.116,163.787)
C4': (35.252,96.440,160.086)
C2': (36.621,95.797,158.286)
C2: (40.667,98.095,156.646)
N1: (41.747,98.316,157.407)
N3: (39.416,97.827,157.014)
N6: (42.683,98.493,159.510)
N7: (39.858,97.894,160.565)
N9: (38.187,97.554,159.098)
O5': (36.288,96.664,162.262)
O3': (35.414,94.083,159.532)
OP1: (45.039,101.399,171.371)
OP2: (43.205,100.677,169.716)
C3': (47.548,100.765,166.924)
C1': (46.887,98.667,166.102)
C5': (46.991,100.159,169.341)
O4': (46.934,98.591,167.516)
C8: (44.405,99.091,166.493)
O2': (49.046,99.495,165.470)
C6: (42.882,98.698,163.361)
C5: (43.627,98.818,164.536)
C4: (44.986,98.589,164.442)
P: (44.561,100.483,170.296)
C4': (47.634,99.746,168.045)
C2': (47.707,99.891,165.691)
C2: (44.860,98.172,162.295)
N1: (43.540,98.364,162.233)
N3: (45.672,98.260,163.339)
N6: (41.568,98.899,163.297)
N7: (43.270,99.131,165.839)
N9: (45.485,98.775,165.706)
O5': (45.622,100.521,169.111)
O3': (48.561,101.750,167.036)
Image (generated by PyMOL):
PyMOL image
show in jmol